WERAM Information

Tag Content
WERAM ID WERAM-Lac-0194
Ensembl Protein ID ENSLACP00000022113.1
Gene Name prdm1a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000022375.1 ENSLACT00000026474.1 ENSLACP00000022113.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 6.80e-42 142.5 60 165
Organism Latimeria chalumnae
Domain Profile
  HMT RIZ
               RIZ.txt  12 keglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqineqif 100
                           ke +g+ +k++i+kg++fGP+vGe++++++v +nan+k++w+i+ ++g+ ++++D+ +eeksnW+ryvn A+s +eqNLaa+q++++i+
  ENSLACP00000022113.1  60 KEIIGILSKEYIPKGTRFGPLVGEVYTNDTVPKNANRKYFWRIY-SSGKFHHFIDGFNEEKSNWMRYVNPAHSVQEQNLAACQNGMNIY 147
                           4669****************************************.99999999************************************ PP
               RIZ.txt 101 YktikdIepdeELLvwyk 118
                           ++tik+I++++ELLvwy+
  ENSLACP00000022113.1 148 FYTIKPIPANQELLVWYC 165
                           *****************6 PP
Protein Sequence
(Fasta)		MKMGTEDADM TQWSEMEFEE NCTYIVNDNP WDPCADGGNW TQAEASLPRN LIFKYAPSCK 60
EIIGILSKEY IPKGTRFGPL VGEVYTNDTV PKNANRKYFW RIYSSGKFHH FIDGFNEEKS 120
NWMRYVNPAH SVQEQNLAAC QNGMNIYFYT IKPIPANQEL LVWYCREFAD RLDYPS 176
Nucleotide Sequence
(Fasta)		AAAATACTGG GGGATGCTTT GACTGGATAC ATGGGAACAG TTAAAAGTAC AACTTTGAGA 60
CAGACATCAT TGCTGGCTGC CACACAGCAT AGCTCGGACG CTTTGAATCG TGAGGTTTGA 120
ACAGGGGAAG AAGCGAGTTC ACGATGAAAA TGGGCACGGA GGATGCCGAT ATGACGCAGT 180
GGTCAGAGAT GGAATTTGAG GAGAATTGCA CCTACATAGT CAACGACAAT CCCTGGGACC 240
CTTGTGCTGA CGGGGGCAAC TGGACTCAGG CTGAGGCTTC CCTACCAAGA AACTTGATCT 300
TCAAATATGC ACCCAGTTGT AAAGAGATTA TTGGTATTTT AAGCAAAGAA TACATCCCAA 360
AAGGAACCCG GTTTGGACCA CTTGTAGGCG AGGTGTACAC CAACGATACA GTTCCCAAGA 420
ATGCAAACCG AAAGTATTTC TGGCGGATTT ATTCCAGTGG AAAGTTCCAT CACTTTATTG 480
ACGGGTTCAA TGAGGAGAAG AGCAACTGGA TGCGCTATGT AAACCCAGCC CACTCTGTTC 540
AGGAGCAGAA CCTGGCTGCT TGTCAGAACG GGATGAATAT TTACTTCTAC ACCATCAAGC 600
CCATCCCTGC CAATCAGGAA TTGCTGGTCT GGTATTGTCG GGAATTTGCA GACCGCCTTG 660
ATTACCCTTC C 672
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 85 8e-93 336
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 84 6e-92 333
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 85 1e-91 332
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 84 1e-91 332
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 84 2e-91 331
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 84 2e-91 331
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 83 1e-90 329
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 83 2e-89 325
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 83 2e-89 324
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 83 2e-89 324
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 83 2e-89 324
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 83 3e-89 324
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 83 4e-89 323
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 83 4e-89 323
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 83 4e-89 323
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 83 5e-89 323
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 83 6e-89 323
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 83 7e-89 323
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 82 8e-89 322
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 83 8e-89 322
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 82 9e-89 322
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 84 1e-88 322
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 81 1e-88 322
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 82 2e-88 321
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 82 2e-88 321
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 83 2e-88 321
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 82 2e-88 321
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 84 4e-88 320
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 80 6e-88 320
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 83 7e-88 319
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 81 9e-88 319
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 82 1e-87 318
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 80 3e-87 317
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 81 4e-87 317
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 81 5e-87 317
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 81 1e-86 315
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 81 1e-86 315
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 81 1e-86 315
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 80 1e-86 315
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 80 2e-86 315
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 81 7e-86 313
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 81 8e-86 313
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 78 1e-85 312
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 80 6e-84 306
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 82 1e-83 305
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 78 4e-82 300
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 78 4e-80 293
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 74 3e-78 288
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 72 6e-77 283
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 70 2e-75 278
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 68 1e-72 269
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 69 4e-72 267
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 68 2e-71 265
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 67 6e-71 263
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 85 7e-66 246
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 60 2e-64 241
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 63 4e-63 237
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 59 1e-56 216
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 54 1e-52 202
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 39 6e-20 94.4
WERAM-Tut-0059 ENSTTRP00000004738.1 Tursiops truncatus 41 2e-15 79.3
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 37 3e-15 78.6
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 32 6e-14 74.3
Created Date 25-Jun-2016