WERAM Information

Tag Content
WERAM ID WERAM-Lac-0165
Ensembl Protein ID ENSLACP00000019582.1
Gene Name prdm1a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000017221.1 ENSLACT00000019720.1 ENSLACP00000019582.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 2.00e-36 124.9 59 163
Organism Latimeria chalumnae
Domain Profile
  HMT RIZ
               RIZ.txt  12 keglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqineqif 100
                           ++ +gv ++++i++g++fGP+vG+++++++v +n+n+k++w+i    g  + ++Da d +ksnW+ryvn A+s +eqNL+a+q++++i+
  ENSLACP00000019582.1  59 EDVVGVLSREYIPQGTRFGPVVGDIYTKDNVPKNTNRKYFWRIH-AAGRLHRFIDAYDTQKSNWMRYVNPAHSLQEQNLVACQNGMDIY 146
                           4459****************************************.66666666************************************ PP
               RIZ.txt 101 YktikdIepdeELLvwy 117
                           ++t+k+I+  +ELLvwy
  ENSLACP00000019582.1 147 FYTVKPIPSSTELLVWY 163
                           ***************** PP
Protein Sequence
(Fasta)		KMKAEVTDMA YWREADLEEK CTYIVNDQPW DSSRCANTLR AKASIPRNLT FKYDSCNEED 60
VVGVLSREYI PQGTRFGPVV GDIYTKDNVP KNTNRKYFWR IHAAGRLHRF IDAYDTQKSN 120
WMRYVNPAHS LQEQNLVACQ NGMDIYFYTV KPIPSSTELL VWYSREFLER LSYLPTEELR 180
MELSKKKKKG GFNSSEPNII QDKSNLKRHY LFEILRLEFF LTQEKSSFTS TDTPESFNMH 240
VLAFSKPLLP PPPSPPKIIY PVGMILPFQF LKEHLSYQYI KPFYLNEGAQ PRAAHPSPRT 300
SPNQRSKSPN NHTGLNCHSS KMSTSLHKEL PLHLNGLYNN VESLVSYPMF STSNLSPPYI 360
YSYSSLPSNY PRFLLPHYSP GLHGISPLNS SSNGNNLALS SRNPPTYGSF LGNDVQPYPL 420
ISRSVFPMPQ PHGQIQPLQM PEDRKDILIP APTSAFSLTG PAACLKERPL NNSPPTGTTA 480
TSDVQLPKST SHVSSHNEAI NLSRPKTTQA ATLSQYRSVP YPLKKQNGKI KYECNVCFKT 540
FGQLSNLKVD IVHIHIIPFN CHQCKNRMLY LALSKWYSMY RGSKGSRFQG CRFGHFQILL 600
KHLRQPITSK VRCYKVCALL YKQLSILKIY TELCHKRFSS NQCPLCSKTY IHHFSLKVHQ 660
RGNCPLSPAA GQSQQELCKV NEEIDRFDMS QDADNLEGKT DMNEMVVAAE NLIL 714
Nucleotide Sequence
(Fasta)		AAGATGAAGG CGGAGGTAAC AGATATGGCT TACTGGCGCG AGGCAGATTT GGAAGAGAAA 60
TGTACTTACA TTGTGAATGA CCAGCCTTGG GACTCATCCA GATGTGCTAA TACTCTTCGT 120
GCGAAGGCTT CCATACCCCG AAACCTTACC TTTAAATATG ACAGCTGCAA TGAAGAAGAT 180
GTAGTTGGAG TTCTCAGCAG AGAATACATC CCCCAGGGAA CACGCTTTGG ACCAGTGGTA 240
GGGGATATCT ACACCAAAGA TAATGTTCCA AAGAACACAA ACAGAAAGTA TTTCTGGAGG 300
ATACACGCGG CTGGACGACT CCATCGTTTT ATTGATGCCT ACGACACACA GAAGAGTAAC 360
TGGATGCGCT ATGTGAATCC AGCGCACTCC CTCCAGGAGC AGAACCTTGT GGCTTGCCAG 420
AATGGCATGG ACATTTACTT CTACACTGTC AAACCCATCC CCTCCAGCAC CGAGCTCCTG 480
GTGTGGTACA GCCGAGAGTT TCTCGAACGT CTGAGCTACC TTCCAACTGA GGAGCTGAGG 540
ATGGAACTGA GTAAGAAAAA AAAAAAGGGG GGGTTTAATT CTTCTGAACC AAATATAATA 600
CAAGATAAAA GCAATTTAAA GAGGCATTAT CTTTTTGAGA TTTTAAGATT AGAATTTTTT 660
TTAACACAGG AAAAAAGTTC ATTCACTAGC ACTGATACAC CTGAATCATT CAACATGCAT 720
GTTTTGGCTT TTAGTAAACC CCTCCTCCCT CCTCCCCCCT CCCCACCAAA AATCATTTAC 780
CCTGTAGGCA TGATATTACC TTTCCAGTTT CTAAAAGAAC ACTTGTCTTA TCAGTACATC 840
AAACCATTCT ATCTTAATGA GGGTGCTCAG CCCAGGGCAG CTCACCCTTC TCCCAGAACG 900
AGTCCAAACC AAAGATCAAA AAGTCCAAAT AACCATACAG GCCTCAACTG CCATTCTTCA 960
AAGATGTCTA CCTCACTACA CAAAGAGCTC CCACTTCATT TGAATGGACT TTATAACAAT 1020
GTGGAAAGTT TAGTGTCCTA CCCAATGTTT TCAACAAGCA ATCTCTCACC ACCATACATA 1080
TACTCCTACA GCTCTCTTCC TTCTAATTAT CCAAGATTCC TATTACCTCA CTATTCTCCT 1140
GGTTTGCATG GGATCAGTCC CCTGAACAGC TCTAGCAATG GGAATAACCT AGCGTTGTCT 1200
TCTAGAAATC CTCCAACATA TGGTAGCTTT TTGGGTAATG ATGTCCAGCC TTACCCATTG 1260
ATATCAAGGT CCGTTTTCCC AATGCCACAG CCTCATGGAC AAATCCAGCC ACTTCAAATG 1320
CCAGAGGACA GAAAAGACAT TCTTATTCCA GCACCCACCA GTGCCTTCTC GCTCACTGGT 1380
CCAGCAGCTT GCCTCAAAGA GAGGCCTTTG AACAACTCCC CACCGACCGG CACCACAGCA 1440
ACCTCAGACG TTCAACTACC AAAATCTACC TCACACGTTT CAAGCCATAA TGAAGCAATT 1500
AACCTCAGTA GACCAAAGAC CACCCAGGCA GCAACTCTCA GTCAATACAG ATCTGTTCCA 1560
TATCCTCTGA AAAAGCAAAA TGGCAAGATT AAGTACGAAT GCAACGTGTG CTTTAAAACC 1620
TTTGGACAGT TGTCGAACCT AAAGGTAGAT ATAGTTCACA TACACATTAT ACCATTTAAT 1680
TGTCATCAGT GTAAAAATAG GATGCTATAT CTAGCTCTTT CTAAATGGTA CAGTATGTAC 1740
AGGGGTTCAA AGGGGTCTCG TTTTCAGGGC TGCAGATTTG GGCATTTTCA AATATTACTG 1800
AAACACCTAA GGCAACCAAT TACATCTAAG GTTAGGTGTT ACAAAGTGTG TGCACTGTTG 1860
TACAAGCAGC TTTCAATTCT AAAAATTTAT ACTGAATTAT GCCACAAACG CTTTAGCAGC 1920
AACCAGTGTC CCTTGTGCTC CAAGACATAC ATCCATCACT TCAGTCTGAA GGTCCACCAG 1980
AGGGGGAACT GCCCCCTGTC CCCAGCTGCT GGTCAATCTC AGCAGGAACT CTGTAAGGTG 2040
AATGAAGAGA TTGACAGGTT TGACATGAGT CAAGATGCTG ACAATTTGGA GGGCAAAACT 2100
GACATGAACG AGATGGTTGT CGCAGCGGAA AACTTGATCC TA 2143
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 45 9e-147 518
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 44 5e-146 515
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 44 9e-145 511
WERAM-Leo-0040 ENSLOCP00000005995.1 Lepisosteus oculatus 44 4e-144 509
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 44 9e-144 508
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 44 9e-144 508
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 44 1e-143 508
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 44 2e-143 507
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 44 3e-143 506
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 44 3e-143 506
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 44 5e-143 505
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 44 5e-143 505
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 44 6e-143 505
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 44 9e-143 504
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 43 1e-142 504
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 44 4e-142 503
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 44 4e-142 502
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 44 2e-140 497
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 44 2e-140 497
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 43 3e-140 496
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 44 2e-139 493
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 42 4e-139 492
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 43 1e-138 491
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 43 1e-138 491
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 43 1e-138 491
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 44 3e-138 489
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 44 3e-138 489
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 44 4e-138 489
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 43 7e-138 488
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 43 2e-137 487
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 44 1e-136 484
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 44 1e-136 484
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 43 3e-136 483
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 42 9e-133 471
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 43 5e-132 469
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 42 1e-130 464
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 42 4e-130 462
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 41 5e-126 449
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 41 9e-126 448
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 41 5e-125 446
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 41 2e-124 444
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 42 4e-124 442
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 37 2e-109 394
WERAM-Xim-0207 ENSXMAP00000016799.1 Xiphophorus maculatus 38 1e-104 378
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 38 7e-104 375
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 37 1e-103 375
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 48 5e-78 290
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 45 3e-75 280
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 48 5e-75 280
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 63 5e-68 256
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 60 3e-63 241
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 59 7e-63 239
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 58 1e-61 235
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 63 9e-60 229
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 43 1e-59 228
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 63 4e-59 227
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 60 5e-55 213
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 48 2e-54 211
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 44 1e-52 206
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 40 2e-19 95.1
WERAM-Tut-0059 ENSTTRP00000004738.1 Tursiops truncatus 40 2e-16 85.5
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 36 3e-13 74.3
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 29 5e-13 73.9
Created Date 25-Jun-2016