Tag |
Content |
WERAM ID |
WERAM-Gaa-0111 |
Ensembl Protein ID |
ENSGACP00000014764.1 |
Gene Name |
hdac11 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-IV |
3.90e-154 |
512.7 |
31 |
317 |
HDAC |
Class-I |
5.20e-23 |
82.5 |
18 |
310 |
|
Organism |
Gasterosteus aculeatus |
Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89 leklhpfda+kw+kvi+flkee++++d+ +vea ea++edllvvht++yl+ lk+sl+va iteip+++flpnflvqr+vlrplr+q+g ENSGACP00000014764.1 31 LEKLHPFDAGKWGKVIHFLKEEQFVTDGNIVEALEATEEDLLVVHTQRYLNRLKWSLVVAAITEIPPLMFLPNFLVQRRVLRPLRTQTG 119 79*************************************************************************************** PP class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178 Gti+aaklav+rGwainvGGGfhhcss++GGGfcayaditlaikflfer+++isr++iidldahqGnGherdf dd rvyi+dvynr+i ENSGACP00000014764.1 120 GTIMAAKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFLDDGRVYIMDVYNRHI 208 ***************************************************************************************** PP class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267 yp+d ak+ai+rkvel++gted+eyl+k+e + +l+e +pd++vynaGtdvl+Gd+lG+l+ispegi krde+vfr +r +++pi+ ENSGACP00000014764.1 209 YPGDGYAKRAIKRKVELDWGTEDSEYLQKVELHTDGALNEVRPDILVYNAGTDVLDGDPLGGLSISPEGIRKRDEIVFRAARRRGVPIL 297 ***************************************************************************************** PP class-4.txt 268 mvtsGGyqkrsarviadsil 287 mvtsGGyqk++ar+iadsil ENSGACP00000014764.1 298 MVTSGGYQKKTARIIADSIL 317 ******************95 PP
HDAC Class-I
class-1.txt 3 vayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepen.aeelskelkkfnvge 90 ++y+ d +++ + ++ hp ++ + +++ + + + +iv++ +a+ e+ll +h++ y++ lk + + +e++ ENSGACP00000014764.1 18 IVYHPDYNITFMGLEKLHPFDAGKWGKVIHFLKEEQFVTDGNIVEALEATEEDLLVVHTQRYLNRLKWSLVVAaITEIP----PLMFLP 102 567778888888889999999999999999999999999***********************99998665544044444....334444 PP class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgve 176 + v + ++ tG+++ aak ++ ain GG+hh ++ Gfc Di lai l +r + id+d h G+g e ENSGACP00000014764.1 103 NFLVQRRVLRPLRTQTGGTIMAAKLAV--DRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFErveGISRATIIDLDAHQGNGHE 189 555666677777999*****9886544..46789****************************99987222467999************* PP class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265 f rv + + y+ + +Pg G + + v l+ g +D++y + ++ + ++ +P+++v + G+D l gD+lg ENSGACP00000014764.1 190 RDFLDDGRVYIMDV--YNRHIYPGDGYAKRAIKR-------KVELDWGTEDSEYLQKVELHTDGALNEVRPDILVYNAGTDVLDGDPLG 269 *********98765..88889****987655444.......4799******************************************** PP class-1.txt 266 efnlsikghae....cvkfvksfnlpllvlGGGGYtlrnvaR 303 ++s +g+ + + + ++ +p+l++ GGY+++ +aR ENSGACP00000014764.1 270 GLSISPEGIRKrdeiVFRAARRRGVPILMVTSGGYQKK-TAR 310 ********9874443446668889***********875.455 PP
|
Protein Sequence (Fasta) | SSHCTALHAC IPRTALPIVY HPDYNITFMG LEKLHPFDAG KWGKVIHFLK EEQFVTDGNI 60 VEALEATEED LLVVHTQRYL NRLKWSLVVA AITEIPPLMF LPNFLVQRRV LRPLRTQTGG 120 TIMAAKLAVD RGWAINVGGG FHHCSSDKGG GFCAYADITL AIKFLFERVE GISRATIIDL 180 DAHQGNGHER DFLDDGRVYI MDVYNRHIYP GDGYAKRAIK RKVELDWGTE DSEYLQKVEL 240 HTDGALNEVR PDILVYNAGT DVLDGDPLGG LSISPEGIRK RDEIVFRAAR RRGVPILMVT 300 SGGYQKKTAR IIADSILNLR LQGLIGAEAL EGEGSSPPPP ATS 343Protein Fasta Sequence
>ENSGACP00000014764.1|Class-I|Gasterosteus aculeatus SSHCTALHACIPRTALPIVYHPDYNITFMGLEKLHPFDAGKWGKVIHFLKEEQFVTDGNIVEALEATEEDLLVVHTQRYLNRLKWSLVVAAITEIPPLMFLPNFLVQRRVLRPLRTQTGGTIMAAKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFLDDGRVYIMDVYNRHIYPGDGYAKRAIKRKVELDWGTEDSEYLQKVELHTDGALNEVRPDILVYNAGTDVLDGDPLGGLSISPEGIRKRDEIVFRAARRRGVPILMVTSGGYQKKTARIIADSILNLRLQGLIGAEALEGEGSSPPPPATS
|
Nucleotide Sequence (Fasta) | AGCTCGCACT GCACTGCATT GCACGCCTGC ATCCCAAGAA CAGCCCTGCC CATTGTGTAC 60 CACCCAGACT ACAACATCAC CTTCATGGGC CTTGAAAAGC TCCACCCGTT TGATGCTGGG 120 AAGTGGGGGA AAGTCATTCA CTTCTTGAAA GAGGAGCAGT TTGTCACTGA CGGGAATATC 180 GTGGAAGCCC TGGAAGCGAC CGAAGAGGAC CTGCTGGTGG TTCACACTCA ACGCTACCTG 240 AACAGATTAA AGTGGTCGCT GGTGGTGGCG GCGATCACAG AAATCCCACC TCTGATGTTT 300 CTGCCTAATT TCCTTGTGCA GCGGAGAGTG TTGAGGCCTT TGCGGACACA GACTGGGGGA 360 ACAATAATGG CAGCAAAGCT GGCCGTCGAC CGAGGATGGG CCATAAACGT AGGAGGAGGC 420 TTCCACCACT GCTCCAGCGA CAAGGGAGGG GGCTTCTGCG CCTACGCCGA CATCACTCTG 480 GCCATCAAGT TCCTGTTCGA GCGAGTGGAA GGCATCTCCA GGGCTACCAT CATCGATCTG 540 GACGCTCATC AGGGAAACGG ACACGAGCGT GATTTCCTGG ACGACGGGCG GGTGTACATC 600 ATGGACGTGT ATAACCGCCA CATATATCCT GGGGACGGTT ATGCCAAGCG AGCCATAAAG 660 AGGAAGGTGG AGCTCGACTG GGGCACCGAG GACTCCGAGT ACCTCCAGAA AGTAGAGCTG 720 CACACCGACG GGGCGCTGAA TGAGGTCCGC CCCGACATCC TCGTCTACAA CGCGGGGACG 780 GACGTCTTGG ACGGAGACCC CCTCGGAGGA CTCTCTATAT CACCAGAGGG CATCAGGAAG 840 CGGGACGAGA TCGTGTTCCG GGCCGCCAGG CGACGGGGCG TCCCCATACT CATGGTGACG 900 TCCGGGGGTT ACCAGAAGAA AACCGCTCGC ATCATCGCCG ACTCCATCCT CAACCTTCGC 960 CTTCAGGGCC TGATCGGAGC GGAGGCCCTG GAGGGGGAGG GTTCATCGCC GCCGCCGCCG 1020 GCGACCAGC
Nucleotide Fasta Sequence
>ENSGACP00000014764.1|Class-I|Gasterosteus aculeatus AGCTCGCACTGCACTGCATTGCACGCCTGCATCCCAAGAACAGCCCTGCCCATTGTGTACCACCCAGACTACAACATCACCTTCATGGGCCTTGAAAAGCTCCACCCGTTTGATGCTGGGAAGTGGGGGAAAGTCATTCACTTCTTGAAAGAGGAGCAGTTTGTCACTGACGGGAATATCGTGGAAGCCCTGGAAGCGACCGAAGAGGACCTGCTGGTGGTTCACACTCAACGCTACCTGAACAGATTAAAGTGGTCGCTGGTGGTGGCGGCGATCACAGAAATCCCACCTCTGATGTTTCTGCCTAATTTCCTTGTGCAGCGGAGAGTGTTGAGGCCTTTGCGGACACAGACTGGGGGAACAATAATGGCAGCAAAGCTGGCCGTCGACCGAGGATGGGCCATAAACGTAGGAGGAGGCTTCCACCACTGCTCCAGCGACAAGGGAGGGGGCTTCTGCGCCTACGCCGACATCACTCTGGCCATCAAGTTCCTGTTCGAGCGAGTGGAAGGCATCTCCAGGGCTACCATCATCGATCTGGACGCTCATCAGGGAAACGGACACGAGCGTGATTTCCTGGACGACGGGCGGGTGTACATCATGGACGTGTATAACCGCCACATATATCCTGGGGACGGTTATGCCAAGCGAGCCATAAAGAGGAAGGTGGAGCTCGACTGGGGCACCGAGGACTCCGAGTACCTCCAGAAAGTAGAGCTGCACACCGACGGGGCGCTGAATGAGGTCCGCCCCGACATCCTCGTCTACAACGCGGGGACGGACGTCTTGGACGGAGACCCCCTCGGAGGACTCTCTATATCACCAGAGGGCATCAGGAAGCGGGACGAGATCGTGTTCCGGGCCGCCAGGCGACGGGGCGTCCCCATACTCATGGTGACGTCCGGGGGTTACCAGAAGAAAACCGCTCGCATCATCGCCGACTCCATCCTCAACCTTCGCCTTCAGGGCCTGATCGGAGCGGAGGCCCTGGAGGGGGAGGGTTCATCGCCGCCGCCGCCGGCGACCAGC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |