Tag |
Content |
WERAM ID |
WERAM-Cap-0083 |
Ensembl Protein ID |
ENSCPOP00000005971.2 |
Gene Name |
HDAC11 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-IV |
6.10e-168 |
557.5 |
31 |
317 |
HDAC |
Class-I |
9.70e-26 |
91 |
32 |
310 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89 leklhpfda+kw+kvi flkeekll+d++lveareas++dllvvhtr+yl++lk+s++vatiteip+v+flpnflvqrkvlrplr+q+g ENSCPOP00000005971.2 31 LEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDDDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTG 119 79*************************************************************************************** PP class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178 Gti+a+klaverGwainvGGGfhhcss+rGGGfcayaditlaikflfer+++isr++iidldahqGnGherdf++dkrvyi+dvynr+i ENSCPOP00000005971.2 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERMEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 208 ***************************************************************************************** PP class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267 yp+dr+ak+airrkvele+gtedeeyl+k+er+++++lqe+ pd+vvynaGtd+leGdrlG+l+isp givkrdevvfrlvra++ipi+ ENSCPOP00000005971.2 209 YPGDRFAKQAIRRKVELEWGTEDEEYLSKVERNVERALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDEVVFRLVRAHQIPIL 297 ***************************************************************************************** PP class-4.txt 268 mvtsGGyqkrsarviadsil 287 mvtsGGyqkr+ar+iadsil ENSCPOP00000005971.2 298 MVTSGGYQKRTARIIADSIL 317 ******************95 PP
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkve.penaeelskelkkfnvgedcPvfdglfeycql 104 ++ hp ++ + +++ + +l + +v++++as ++ll +h+ y++ lk + + + +e++ + + v ++ ++ ENSCPOP00000005971.2 32 EKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDDDLLVVHTRRYLNELKWSFvVATITEIPPVIFL----PNFLVQRKVLRPLRT 116 5667777777777777777777777777888888888888888888888888754404444454433332....333444555666688 PP class-1.txt 105 itGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmtvsf 190 tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l +r + id+d h G+g e f +rv + + ENSCPOP00000005971.2 117 QTGGTIMAG-KLA-VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFErmeGISRATIIDLDAHQGNGHERDFMGDKRVYIMDV 203 99***9876.554.45778*****************************99977222457899**********************98766 PP class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae... 276 y+ + +Pg + + + v l+ g +De+y + +++ +++ ++ + P++vv + G+D l gDrlg ++s g+ + ENSCPOP00000005971.2 204 --YNRHIYPGDRFAK-QAIRR------KVELEWGTEDEEYLSKVERNVERALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKrde 283 ..88889**964333.33333......489**************************************************999876565 PP class-1.txt 277 .cvkfvksfnlpllvlGGGGYtlrnvaR 303 + ++v+ +++p+l++ GGY++r aR ENSCPOP00000005971.2 284 vVFRLVRAHQIPILMVTSGGYQKRT-AR 310 56799****************9874.45 PP
|
Protein Sequence (Fasta) | RPHATQLYQH VPETRWPIVY SPRYNITFMG LEKLHPFDAG KWGKVISFLK EEKLLSDGML 60 VEAREASDDD LLVVHTRRYL NELKWSFVVA TITEIPPVIF LPNFLVQRKV LRPLRTQTGG 120 TIMAGKLAVE RGWAINVGGG FHHCSSDRGG GFCAYADITL AIKFLFERME GISRATIIDL 180 DAHQGNGHER DFMGDKRVYI MDVYNRHIYP GDRFAKQAIR RKVELEWGTE DEEYLSKVER 240 NVERALQEHL PDVVVYNAGT DILEGDRLGG LSISPGGIVK RDEVVFRLVR AHQIPILMVT 300 SGGYQKRTAR IIADSILNLH DLGLIGLESP SLSAQSSDTP LLPPAVP 347Protein Fasta Sequence
>ENSCPOP00000005971.2|Class-I|Cavia porcellus RPHATQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDDDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERMEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDEEYLSKVERNVERALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDEVVFRLVRAHQIPILMVTSGGYQKRTARIIADSILNLHDLGLIGLESPSLSAQSSDTPLLPPAVP
|
Nucleotide Sequence (Fasta) | AGGCCACACG CCACCCAGCT GTACCAGCAT GTGCCAGAAA CTCGTTGGCC CATCGTGTAT 60 TCACCCCGCT ACAATATCAC CTTCATGGGC CTGGAGAAGC TGCACCCCTT CGACGCTGGC 120 AAATGGGGCA AGGTGATCAG TTTCCTAAAA GAAGAGAAGC TGCTGTCAGA TGGCATGTTG 180 GTGGAGGCGC GGGAGGCCTC GGATGACGAC CTGCTGGTAG TGCACACCAG GCGGTATCTC 240 AATGAACTGA AGTGGTCCTT CGTCGTCGCC ACCATCACAG AAATACCCCC TGTCATCTTC 300 CTCCCCAACT TCCTGGTGCA GAGGAAGGTG CTGCGGCCCC TCCGGACCCA GACTGGAGGA 360 ACCATTATGG CAGGGAAGCT GGCTGTGGAA CGAGGCTGGG CCATCAATGT GGGGGGTGGC 420 TTCCACCACT GCTCCAGTGA CCGGGGCGGG GGCTTCTGTG CCTATGCTGA CATCACGCTG 480 GCCATCAAGT TCCTGTTCGA GCGAATGGAA GGCATCTCAA GGGCCACCAT CATTGATCTT 540 GACGCCCATC AGGGCAATGG GCACGAGAGA GACTTCATGG GTGACAAACG CGTGTACATC 600 ATGGATGTCT ACAACCGCCA CATCTACCCT GGGGACCGCT TTGCCAAGCA AGCCATCAGG 660 CGGAAGGTGG AGCTGGAGTG GGGCACAGAG GATGAGGAGT ACCTGAGCAA AGTGGAGAGG 720 AACGTGGAGA GAGCCCTCCA GGAGCACCTA CCTGACGTGG TGGTGTACAA CGCCGGCACC 780 GACATCCTGG AGGGGGACCG CCTCGGGGGA CTGTCAATCA GCCCTGGGGG CATTGTGAAG 840 CGGGATGAGG TGGTATTCCG CTTGGTCCGG GCTCACCAGA TCCCCATCCT CATGGTGACC 900 TCAGGCGGGT ACCAGAAGCG CACAGCCCGC ATCATTGCAG ACTCCATCCT CAATTTGCAT 960 GACCTGGGGC TCATCGGCCT AGAGTCACCC AGCCTGTCGG CACAGAGCTC AGACACGCCT 1020 CTGCTCCCAC CTGCGGTTCC CTGA
1045Nucleotide Fasta Sequence
>ENSCPOP00000005971.2|Class-I|Cavia porcellus AGGCCACACGCCACCCAGCTGTACCAGCATGTGCCAGAAACTCGTTGGCCCATCGTGTATTCACCCCGCTACAATATCACCTTCATGGGCCTGGAGAAGCTGCACCCCTTCGACGCTGGCAAATGGGGCAAGGTGATCAGTTTCCTAAAAGAAGAGAAGCTGCTGTCAGATGGCATGTTGGTGGAGGCGCGGGAGGCCTCGGATGACGACCTGCTGGTAGTGCACACCAGGCGGTATCTCAATGAACTGAAGTGGTCCTTCGTCGTCGCCACCATCACAGAAATACCCCCTGTCATCTTCCTCCCCAACTTCCTGGTGCAGAGGAAGGTGCTGCGGCCCCTCCGGACCCAGACTGGAGGAACCATTATGGCAGGGAAGCTGGCTGTGGAACGAGGCTGGGCCATCAATGTGGGGGGTGGCTTCCACCACTGCTCCAGTGACCGGGGCGGGGGCTTCTGTGCCTATGCTGACATCACGCTGGCCATCAAGTTCCTGTTCGAGCGAATGGAAGGCATCTCAAGGGCCACCATCATTGATCTTGACGCCCATCAGGGCAATGGGCACGAGAGAGACTTCATGGGTGACAAACGCGTGTACATCATGGATGTCTACAACCGCCACATCTACCCTGGGGACCGCTTTGCCAAGCAAGCCATCAGGCGGAAGGTGGAGCTGGAGTGGGGCACAGAGGATGAGGAGTACCTGAGCAAAGTGGAGAGGAACGTGGAGAGAGCCCTCCAGGAGCACCTACCTGACGTGGTGGTGTACAACGCCGGCACCGACATCCTGGAGGGGGACCGCCTCGGGGGACTGTCAATCAGCCCTGGGGGCATTGTGAAGCGGGATGAGGTGGTATTCCGCTTGGTCCGGGCTCACCAGATCCCCATCCTCATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCAGACTCCATCCTCAATTTGCATGACCTGGGGCTCATCGGCCTAGAGTCACCCAGCCTGTCGGCACAGAGCTCAGACACGCCTCTGCTCCCACCTGCGGTTCCCTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |