WERAM Information

Tag Content
WERAM ID WERAM-Asm-0040
Ensembl Protein ID ENSAMXP00000005078.1
Gene Name prdm1a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMXG00000004952.1 ENSAMXT00000005078.1 ENSAMXP00000005078.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 8.50e-41 139 85 196
Organism Astyanax mexicanus
Domain Profile
  HMT RIZ
               RIZ.txt   6 aessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalq 94 
                           ++ss  ke +gv ++++i+kg++fGP+vGek++ e+v + an+k++w+i+  +ge +++vD+ dee+snW+ryvn A+s+eeqNLaa+q
  ENSAMXP00000005078.1  85 RHSSDSKEVIGVVSREYIPKGTRFGPLVGEKYTAENVPKDANRKYFWRIY-TEGEFHHFVDGLDEERSNWMRYVNPAHSQEEQNLAACQ 172
                           556667888*****************************************.88999999****************************** PP
               RIZ.txt  95 ineqifYktikdIepdeELLvwyk 118
                           ++++i+++t+k I++d+ELLvwy+
  ENSAMXP00000005078.1 173 NGMNIYFYTVKAIPADQELLVWYC 196
                           ***********************6 PP
Protein Sequence
(Fasta)		MWRWTEGVAA SQHSSVMLTT EEAPHTADQV DAKMNVEDAD MSKWTEAEFE EKCTYIVKDH 60
TWENPQDKPE LTRAQASLPR NLAFRHSSDS KEVIGVVSRE YIPKGTRFGP LVGEKYTAEN 120
VPKDANRKYF WRIYTEGEFH HFVDGLDEER SNWMRYVNPA HSQEEQNLAA CQNGMNIYFY 180
TVKAIPADQE LLVWYCSDFA QRLHYPLSGD LMMQKLKQSL VEAKQQASEE MPVVKREYTV 240
SEILKDTWKV PARPLPTRPH CQYSPDRPIY PRVIYPIRPQ PHHIREEFLK ASTAICFATR 300
SPGQSSSTPS PPARSSPESS PQSSPAPRDP RDLPALPYSA SLGHYPGFSP PTPISSFYPN 360
PHYILSHYSM NGAPPVGSVF PRMYPFINGL LPPHMPHPSA MLPPEGGRNL LLPPPYRDLL 420
IPPPKSAFPQ ATTPKDKPLH GHGHPHVPAS GSPTAGCAAS PDQQPANPTS AQPSAGRLED 480
EEIRLSKMKR GPAGYKTLPY PLKKQNGKIK YECNVCSKTF GQLSNLKVHL RVHSGERPFK 540
CQTCNKGFTQ LAHLQKHYLV HTGEKPHECQ VCHKRFSSTS NLKTHLRLHS GEKPYQCKLC 600
PAKFTQFVHL KLHKRLHTRE RPHKCPHCHR NYIHLCSLRL HLKGYCLAAM PSPCCSLDEL 660
NRINEEIERF DISDHADRLE EIEGVDVERL VEKQILSLLF SREMDLKSSY HKGSDLLGPH 720
LSSSYGLYEP SSETSVIKLL PVKVKQETVE AMEP 754
Nucleotide Sequence
(Fasta)		ATGTGGAGAT GGACGGAGGG AGTGGCCGCC TCTCAGCATA GCTCTGTCAT GTTGACCACT 60
GAGGAGGCTC CCCACACCGC TGACCAGGTG GACGCAAAGA TGAACGTAGA GGACGCCGAC 120
ATGTCCAAGT GGACGGAGGC CGAGTTTGAA GAGAAATGCA CCTACATAGT GAAGGACCAC 180
ACGTGGGAAA ACCCACAAGA CAAGCCAGAG CTTACAAGGG CCCAGGCTTC ACTCCCCCGG 240
AACCTGGCCT TCAGACACTC ATCAGACTCC AAAGAGGTAA TCGGTGTAGT GAGCCGAGAG 300
TACATCCCCA AAGGCACTCG CTTCGGCCCT CTAGTGGGAG AGAAGTACAC CGCAGAGAAT 360
GTCCCCAAAG ATGCCAACAG GAAGTACTTC TGGAGGATTT ACACAGAAGG CGAGTTCCAT 420
CACTTTGTGG ATGGCCTGGA CGAGGAGAGG AGCAACTGGA TGCGCTATGT GAACCCAGCC 480
CATTCACAGG AGGAGCAGAA CCTGGCAGCC TGCCAGAACG GCATGAACAT CTACTTCTAC 540
ACAGTGAAGG CGATTCCAGC TGACCAAGAG CTGCTGGTGT GGTACTGCTC CGACTTCGCC 600
CAGCGACTGC ACTACCCTCT TTCGGGAGAT CTCATGATGC AAAAGCTCAA ACAAAGTCTG 660
GTGGAGGCGA AGCAGCAAGC ATCTGAAGAA ATGCCAGTGG TGAAGAGAGA ATACACTGTT 720
TCAGAGATCC TGAAAGACAC ATGGAAGGTA CCTGCTAGGC CCCTGCCCAC GCGGCCTCAC 780
TGTCAATACA GCCCTGACCG ACCCATCTAC CCCCGTGTCA TCTATCCCAT TCGTCCACAA 840
CCTCATCACA TCAGAGAAGA ATTCTTGAAG GCAAGCACAG CTATCTGCTT TGCCACTCGC 900
TCACCTGGAC AATCCTCATC CACCCCCAGC CCACCAGCAC GCAGCAGCCC AGAGTCCAGT 960
CCCCAGAGCA GTCCTGCACC ACGGGATCCT AGAGACTTAC CTGCCCTCCC CTACAGTGCT 1020
AGCTTGGGCC ACTACCCAGG CTTCTCCCCT CCTACTCCTA TCTCCTCCTT CTACCCCAAT 1080
CCACATTACA TTCTGAGCCA CTACTCTATG AATGGGGCTC CTCCAGTGGG GAGTGTGTTC 1140
CCCCGCATGT ACCCTTTCAT CAATGGCCTA CTGCCTCCTC ACATGCCCCA CCCTTCAGCC 1200
ATGCTTCCTC CTGAGGGAGG CCGGAATTTG CTTTTGCCGC CACCATACAG GGACCTGTTG 1260
ATCCCACCCC CCAAGAGTGC CTTCCCTCAA GCAACAACCC CGAAGGACAA ACCCCTGCAT 1320
GGGCATGGAC ACCCTCATGT CCCTGCTAGT GGATCCCCCA CGGCTGGCTG TGCAGCCTCC 1380
CCTGACCAGC AGCCTGCCAA CCCTACCTCA GCCCAACCAA GCGCTGGACG TCTGGAGGAT 1440
GAGGAAATCC GTCTCAGCAA GATGAAGCGA GGCCCAGCAG GCTACAAGAC CCTGCCATAC 1500
CCTCTGAAAA AGCAGAATGG CAAAATCAAG TACGAGTGCA ATGTATGCAG CAAGACCTTT 1560
GGACAACTTT CCAACCTCAA GGTGCACCTG CGTGTCCACA GTGGTGAACG TCCTTTCAAG 1620
TGTCAGACAT GCAATAAAGG CTTTACCCAG CTGGCCCACC TGCAGAAGCA TTACCTGGTC 1680
CACACAGGAG AGAAGCCCCA TGAGTGCCAG GTGTGTCACA AGCGTTTCAG TAGCACAAGT 1740
AACTTGAAGA CCCACCTGCG ACTACACTCA GGTGAAAAGC CCTACCAGTG CAAGCTTTGC 1800
CCAGCAAAGT TCACACAGTT TGTTCACCTC AAGCTGCACA AACGGCTGCA TACACGAGAG 1860
CGCCCCCACA AGTGCCCGCA CTGTCACCGC AACTACATCC ACCTCTGCAG CCTTCGCCTT 1920
CACCTTAAGG GATACTGCCT GGCTGCCATG CCATCTCCCT GCTGCAGCCT AGATGAGCTC 1980
AATCGCATTA ATGAGGAGAT TGAGCGCTTC GACATCAGTG ACCACGCTGA CCGATTGGAG 2040
GAGATCGAAG GCGTAGATGT GGAGAGGCTG GTGGAGAAGC AGATCCTTAG TCTGCTCTTC 2100
AGCCGGGAAA TGGACCTCAA GTCATCGTAC CACAAAGGCA GTGATCTTCT TGGCCCACAT 2160
CTTTCCAGTT CCTACGGCCT GTACGAGCCA AGCAGCGAGA CATCGGTCAT TAAACTCCTG 2220
CCCGTCAAGG TGAAACAAGA GACTGTGGAG GCGATGGAGC CTTAGCCCCA TCTCTAGCAC 2280
ACAGCCACTA AAAGACACGC TGTCCATCAG CTCCAGCTCC CTGGGTCTGA GCGGTGGACA 2340
GCCACAGGTG TACAAAATCC TTTTCAAAAG GAGCCAGGCT CAGGCCTTTG TCTTCAGGGA 2400
CTTCTTGTAC TCAGGGCTAA GAGGCACTGT TGCAGACTGC TAGCGGTCCA ATGTGTCCTA 2460
CACTTACTTT AGAGACAATC ATCTACTCTT AAATTCATAG TAATATTATT GTTGTTATTG 2520
ATGTTTCTAA TTGTTAATCT TTAATAATAT TTGGTTCAGT TTAGTATGCA ATTTCCTTAA 2580
TTTATTGTCC GATTTGTTTT CCTTTAAAAA CAAAAAATGT TTACAATGAC TTGGTAATCA 2640
TTGCAATTGG ATGTTATGTA TATTTTCTTT CGTCTTTTTT GTCATTCTTT TGTACATAGT 2700
TTCTTGTAGC CTGCATTAGC TGTTTAATTT GTTTGGCTTC TGATTGTGAT AATGTCAAAC 2760
AAAAATAAGG AGCTCACCTT AATTCAGGGT TTTAATTTCT TATATGCAGG CTGGTATTTA 2820
AAAAACAAAA CAAAGGTAGC TCTTTTTGTG GAAGGCTTTG ATGGAATTTT GAATATGCCA 2880
CAATCACATT GTTTCAAATG TCGGGGGGCA GCAGGGCAAG GTTGCTTTTA GATGACTTTC 2940
CCCACAGGCC TTTCTTTAAT CTCTGTCGAG CACTCCTCTG TATAAAAAGG GCATTTTATA 3000
ATTTTTCAAC AAGTTACCTC AAATTATGAG TGTGTGTGTG TATATAGTTC TATTTGTGTG 3060
TTCTGAAGGA AGTCAGAGGC ATATATGATA TTTATTGCTT TTCTACTTGA AGAAGAAACC 3120
AAATGTCCTG GAGTGCAGCT CTCCACGTGG TCCAAATGAA CAGGGGTCTG CTCGCATGTA 3180
GCACACTGGC TATAAAGCTG AGAGTACGTC TCTACTCACT CACTAATATT TTTGGAGCAA 3240
TACTGATACC AAAAGGGGGA GGGGATTGGG GATAAACAAG GAATGCGGAG CTAGTTACCA 3300
AAGTTCACTT ACTTAAAGAG CAATGCGTGT CTATGAAGTG TTAGTTGCTC TTTAGCTGTT 3360
GTCTGTTCTG TAGAGTTTTT TTTGTTTTGT TATTGTTTGC CCCTTTTGCG CTCATGGATG 3420
GCACAAACCA AAGCGCCTTG GTCTTTATAT GCACTGGTTC TTCCTCATCT TCCTCATTTG 3480
TCTTGTATCT GTACTTTTTT TTTTATTTCT TTTCAGACCA GGTTTTGTTA AGTCCAGCTA 3540
TTAAGATGAT CTATTTTCTT AAGGCAACAA GACGTGCCGT AAAGCAGTAG CATCTCCGAA 3600
CTTCTTTTTC TATCTCTTT
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 70 0.0 992
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 56 0.0 796
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 61 0.0 791
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 57 0.0 771
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 55 0.0 718
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 52 0.0 689
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 64 2e-143 507
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 60 8e-130 462
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 61 5e-129 459
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 60 1e-128 458
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 61 2e-128 457
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 61 2e-128 457
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 61 2e-128 457
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 61 3e-128 456
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 61 3e-128 456
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 59 4e-126 449
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 59 4e-126 449
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 60 8e-125 445
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 59 2e-124 443
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 60 5e-124 442
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 60 9e-124 441
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 57 2e-123 441
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 61 4e-123 439
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 58 9e-123 438
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 59 2e-122 437
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 57 2e-122 437
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 58 3e-122 436
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 58 3e-122 436
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 58 3e-122 436
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 58 3e-122 436
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 58 5e-122 436
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 58 6e-122 436
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 58 1e-121 435
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 58 2e-121 434
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 58 2e-121 434
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 58 2e-121 434
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 58 1e-120 431
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 58 1e-120 431
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 58 2e-120 431
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 58 2e-120 431
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 58 8e-120 429
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 70 4e-119 426
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 58 6e-119 426
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 60 4e-117 419
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 69 8e-117 418
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 58 8e-117 418
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 56 6e-116 416
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 55 1e-114 411
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 56 4e-113 406
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 49 2e-90 330
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 67 5e-89 326
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 49 5e-89 326
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 55 1e-87 322
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 67 1e-87 321
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 51 3e-85 313
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 64 2e-82 305
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 70 6e-75 279
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 61 4e-73 273
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 64 2e-54 211
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 39 5e-29 127
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 37 9e-23 106
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 7e-22 103
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 44 5e-21 100
Created Date 25-Jun-2016