WERAM Information

Tag Content
WERAM ID WERAM-Brr-0127
Ensembl Protein ID Bra025948.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra025948 Bra025948.1 Bra025948.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 9.90e-23 81 81 151
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +h++ ++F+ pvd++   ++dY++i+kePmdL t+k++l eg Y+sp++f++Dvrl fnNa  yn+ +++v
  Bra025948.1-P  81 KHKDGWVFNVPVDAKgFGLHDYHTIVKEPMDLGTVKAKLGEGLYESPLDFAEDVRLTFNNAILYNPVGHEV 151
                    89***************************************************************998887 PP
Protein Sequence
(Fasta)		MLKVSLSSIS KLEVRSLKRR LTSELDEVRS LIARFDPQGG NFTTGKGGNK KVKTGNGVKK 60
GDKGTVQIFK KCLNLLTKLM KHKDGWVFNV PVDAKGFGLH DYHTIVKEPM DLGTVKAKLG 120
EGLYESPLDF AEDVRLTFNN AILYNPVGHE VHSMAKFLLS MFEEKWAPIE LQYHSLHREM 180
KPVRDVVLPR PAPVVEPLPA PTPSPSPPLP TLPPAVLEDR TLEIAESMTT PLEPETVTTT 240
ALEKPGGDEE APVDIRDLTM DEKQRLSEEL QDLPYDKLET VVQIVKKSNP ELSQQDDEIE 300
LDIDSLDIQT LWELYSFVTG YKENLSNKKE EDQGFGSERD AESAHNIIQE PATGTERSRV 360
TESGKAIRMS SSPVRQENKA GGSSSSNSSS SDSGSSSSDS DSDSSSGRGS DTGN 414
Nucleotide Sequence
(Fasta)		ATGTTGAAGG TCAGCTTGAG CTCAATTTCG AAGCTTGAAG TCAGGAGCTT GAAGCGGAGA 60
CTAACGTCTG AGCTTGACGA AGTTCGGAGC TTGATCGCAC GGTTCGATCC CCAAGGCGGA 120
AACTTTACAA CAGGGAAAGG TGGAAACAAG AAGGTGAAAA CTGGGAATGG AGTTAAGAAA 180
GGTGATAAAG GTACGGTTCA GATTTTCAAG AAATGTCTCA ATTTGCTGAC GAAATTGATG 240
AAGCATAAGG ATGGATGGGT GTTCAATGTG CCCGTTGATG CTAAAGGGTT TGGTTTGCAT 300
GATTACCACA CCATTGTTAA GGAGCCTATG GATTTGGGTA CTGTGAAGGC TAAGTTAGGG 360
GAAGGTTTGT ATGAGTCGCC GTTGGATTTT GCTGAAGATG TTAGACTTAC TTTTAACAAT 420
GCGATTTTGT ATAATCCTGT TGGGCATGAG GTGCATAGTA TGGCTAAGTT TCTGTTGAGC 480
ATGTTTGAGG AGAAGTGGGC TCCTATTGAA CTGCAGTATC ATAGTCTTCA CAGGGAGATG 540
AAACCGGTTC GTGATGTTGT GTTGCCTCGT CCTGCTCCTG TTGTTGAGCC TTTACCAGCT 600
CCTACACCTT CCCCGTCTCC TCCTCTTCCT ACTCTTCCGC CTGCGGTGCT TGAGGATAGG 660
ACTTTGGAGA TTGCTGAATC TATGACGACA CCGTTGGAAC CGGAAACTGT CACTACTACT 720
GCCCTCGAGA AGCCTGGAGG AGATGAGGAG GCGCCTGTTG ATATTAGGGA CCTGACGATG 780
GATGAGAAAC AGAGACTCAG TGAAGAGCTT CAGGACTTGC CTTATGATAA ACTAGAGACA 840
GTTGTTCAGA TTGTAAAGAA GAGTAATCCG GAACTCTCTC AACAGGATGA TGAGATTGAG 900
CTGGATATTG ACAGTCTTGA CATCCAAACG CTTTGGGAGC TTTATAGTTT TGTGACTGGG 960
TATAAGGAGA ACTTGAGCAA TAAAAAGGAG GAGGATCAGG GTTTTGGTTC AGAAAGAGAT 1020
GCTGAATCTG CTCACAACAT TATCCAAGAA CCGGCAACTG GCACCGAAAG ATCGAGAGTT 1080
ACTGAATCAG GGAAAGCTAT TCGCATGTCT TCTTCTCCTG TTCGGCAAGA AAACAAGGCA 1140
GGTGGATCAA GTAGTTCTAA CAGTTCCAGC AGTGACTCGG GATCTAGCTC TAGTGATTCT 1200
GACAGTGACA GCTCCTCTGG ACGTGGATCA GATACTGGTA ATTAG 1246
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 75 3e-123 439
WERAM-Arl-0031 fgenesh1_pm.C_scaffold_1001524 Arabidopsis lyrata 65 2e-107 386
WERAM-Art-0028 AT1G73150.1 Arabidopsis thaliana 59 2e-89 327
WERAM-Thc-0085 EOY13187 Theobroma cacao 48 2e-52 204
WERAM-Sot-0042 PGSC0003DMT400039787 Solanum tuberosum 44 3e-51 200
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 49 2e-49 193
WERAM-Mua-0032 GSMUA_Achr1P11660_001 Musa acuminata 40 2e-49 193
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 48 3e-49 193
WERAM-Prp-0055 EMJ15030 Prunus persica 45 4e-49 192
WERAM-Sei-0009 Si001167m Setaria italica 48 6e-49 192
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 45 3e-48 190
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 45 4e-48 189
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 45 4e-48 189
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 45 5e-48 189
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 46 7e-48 188
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 40 8e-48 188
WERAM-Met-0055 KEH39253 Medicago truncatula 43 1e-47 188
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 45 2e-47 187
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 45 2e-47 187
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 45 3e-47 186
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 47 1e-46 184
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 45 7e-43 172
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 45 9e-43 171
WERAM-Aet-0058 EMT09500 Aegilops tauschii 43 1e-39 161
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 66 3e-39 160
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 64 8e-39 158
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 66 9e-39 158
WERAM-Amt-0025 ERN13953 Amborella trichopoda 64 1e-38 157
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 61 2e-38 157
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 63 1e-37 154
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 61 3e-37 153
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 63 9e-36 148
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 58 2e-34 144
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 60 1e-32 137
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 56 6e-32 135
Created Date 25-Jun-2016