WERAM Information

Tag Content
WERAM ID WERAM-Brd-0043
Ensembl Protein ID BRADI2G14120.1
Gene Name BRADI2G14120.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI2G14120 BRADI2G14120.1 BRADI2G14120.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 6.00e-18 88
Organism Brachypodium distachyon
Domain Profile
  HDAC HD2
Query: 1  MEFWGLELKPGQTVKVEPEPEHFLHLSQGALGESKKDDKATMF-VKIDGKKLAIGTLSTD 59
          MEFWG+ + P    KV PE +  +H+SQ +L  + K  ++ +  V + G KL IGTLS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 60 KFPQIQFDLVFEKDFELXXXXXXXXXXXXGYK 91
          KFPQI FDLVF+K+FEL            GYK
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYK 92
Query: 207 KKRAAETVLKTPAS-----DKKAKAATPSGQKTGDKKGAVHVATPHPAKKASKTPATSDK 261
           KKR  E+V KTP S        A A+TP  QKT +KK   H ATPHPAKK  K+P  +++
Sbjct: 208 KKRPNESVSKTPVSGKKAKPAAAPASTP--QKTEEKKKGGHTATPHPAKKGGKSPVNANQ 265
Query: 262 SPKSGG-SVACKSCSKTFNS 280
           SPKSGG S    +  K FNS
Sbjct: 266 SPKSGGQSSGGNNNKKPFNS 285
Protein Sequence
(Fasta)		MEFWGLELKP GQTVKVEPEP EHFLHLSQGA LGESKKDDKA TMFVKIDGKK LAIGTLSTDK 60
FPQIQFDLVF EKDFELSHSS KSSSVFFSGY KVFQPAEGDE MDFDSEGSEE SEEDEEEAVI 120
PVTKENGKAE GKQKQVKIDA GSSKAKPVLK AVGNKKGGDE SSDDDESDES DDDIADLSDD 180
DSGSEDGTSE ESDEEEEEET PKKSTGKKRA AETVLKTPAS DKKAKAATPS GQKTGDKKGA 240
VHVATPHPAK KASKTPATSD KSPKSGGSVA CKSCSKTFNS ETALQSHSKA KHNEAK 296
Nucleotide Sequence
(Fasta)		CCCTCTTCAC CGTTCCAATC GCCCTTAAAC CCTAGCACCA GCAGCCGCGC GGCGCTCCTC 60
CCGGCGACTA GGGTTCTTCT CGCCGCCGCC GCCGCCGATT GCAATGGAGT TCTGGGGTCT 120
TGAACTTAAG CCTGGGCAGA CAGTCAAGGT TGAGCCTGAA CCGGAGCACT TTTTGCATCT 180
TTCTCAGGGT GCCCTTGGGG AATCAAAGAA GGATGACAAG GCAACTATGT TTGTGAAAAT 240
TGATGGCAAG AAGTTGGCCA TTGGGACCCT CTCCACTGAC AAGTTCCCTC AAATCCAGTT 300
TGATTTGGTA TTTGAGAAAG ATTTTGAACT ATCGCACAGC TCAAAGAGTT CAAGTGTCTT 360
CTTCTCTGGA TACAAGGTTT TCCAGCCAGC TGAGGGAGAT GAGATGGATT TTGATTCTGA 420
GGGTTCTGAA GAATCAGAGG AAGATGAGGA AGAGGCAGTC ATCCCAGTGA CCAAGGAAAA 480
TGGCAAAGCT GAAGGAAAGC AGAAACAAGT AAAAATTGAT GCGGGATCGT CAAAGGCAAA 540
GCCTGTTTTG AAGGCAGTGG GAAATAAGAA GGGTGGTGAT GAGAGCTCTG ATGATGATGA 600
GTCTGATGAG TCTGATGATG ATATTGCTGA TTTGAGCGAT GATGATTCTG GCAGTGAGGA 660
TGGTACCAGT GAGGAGAGTG ATGAGGAGGA AGAAGAGGAA ACACCCAAGA AGTCTACTGG 720
GAAGAAGAGA GCAGCTGAAA CTGTGTTGAA GACTCCTGCT TCTGATAAGA AGGCAAAGGC 780
TGCTACACCA TCTGGCCAGA AGACAGGTGA CAAGAAGGGG GCTGTCCATG TGGCGACTCC 840
ACATCCGGCG AAGAAGGCAA GCAAGACCCC TGCCACCAGT GACAAGTCCC CCAAATCTGG 900
TGGGTCAGTC GCTTGCAAGT CGTGCAGCAA GACTTTCAAC AGTGAAACTG CTCTACAGTC 960
TCACTCGAAG GCGAAGCACA ATGAGGCCAA GTGAGGATGG TTGGCCGGCT CATCTACCGC 1020
GTTCTGCTAT GTGTTAGGCT ATGTTATTTT GTTCCCCTGA GAAAGTGTCG AGTGAAGCGA 1080
GAAACTGTTA GTGACGATGT TATTGTTATT TCAAGTGGGA AGTGGTTGGT GGTCGTTTTT 1140
TAATGATTGA ATGCTCGTTG TTTGGCTGAA ACTCTGGATG ATGTTTGGCA GTTGAATGTG 1200
TTTATCCCCT CACTCTTTTA ACGATCGTAA AGGTCCAAAA GAAACTAAAC AATGTCATTG 1260
CGAATCACCC AAAGTAAA 1279
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 64 2e-68 256
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 64 2e-68 256
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 66 8e-68 254
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 54 2e-63 239
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 56 2e-60 229
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 47 8e-46 181
WERAM-Mua-0063 GSMUA_Achr3P22840_001 Musa acuminata 47 3e-45 179
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 70 2e-41 166
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 88 4e-38 155
WERAM-Thc-0115 EOY33573 Theobroma cacao 48 5e-38 155
WERAM-Aet-0097 EMT09079 Aegilops tauschii 71 3e-37 152
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 41 3e-34 142
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 70 6e-34 141
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 82 6e-34 141
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 67 1e-33 140
WERAM-Sei-0085 Si022778m Setaria italica 70 5e-32 135
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 78 8e-32 134
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 66 3e-24 109
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 60 5e-23 105
WERAM-Prp-0077 EMJ03579 Prunus persica 59 6e-22 102
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 58 9e-22 101
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 57 9e-22 101
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 57 4e-21 99.4
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 55 6e-21 99.0
WERAM-Met-0051 KEH38943 Medicago truncatula 63 3e-19 92.8
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 51 9e-18 88.2
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 51 9e-18 88.2
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 47 4e-17 85.9
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 49 3e-15 79.7
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 49 3e-15 79.7
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 42 4e-14 75.9
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 46 4e-13 72.8
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 38 1e-11 67.4
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 39 4e-10 62.8
Created Date 25-Jun-2016