WERAM Information

Tag Content
WERAM ID WERAM-Art-0014
Ensembl Protein ID AT1G17790.1
Uniprot Accession Q8H1D7; GTE5_ARATH; Q93ZU2; Q9LMU8
Genbank Protein ID NP_564037.1
Protein Name Transcription factor GTE5, chloroplastic
Genbank Nucleotide ID NM_101642.2
Gene Name GTE5;At1g17790;F2H15.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G17790 AT1G17790.1 AT1G17790.1
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.80e-23 82.6 131 216
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt  56 lifnNaka 63 
                  +if+N++ 
  AT1G17790.1 131 QIFKNCNS 138
                  8*****85 PP
    BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                  +h+ +++F+ pvd++ l ++dY++i+kePmdL t+k +l +  Y+sp++f++Dvrl fnNa  yn+ +++v+
  AT1G17790.1 145 KHKSAWVFNVPVDAKgLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVY 216
                  799***************************************************************999987 PP
Protein Sequence
(Fasta)		MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL 60
SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA KSGVVGRSKK VKTGNGGGKK 120
SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK 180
TKLGKSLYKS PLDFAEDVRL TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL 240
HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE 300
SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS 360
NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK NEAHGFGSER DAESVHNSIQ 420
EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG 480
RGSDNGN 487
Nucleotide Sequence
(Fasta)		AACCATTGAA CCCTAATTTT CTTCTCTTTC GATCTCACCA ATCTTCGATT TCGTGTTTAA 60
ATTCCTCAAT CTTGGTACCT CGGAGCTCAA AAAACCCTAG AGAAACCCCA AATTTGGTTG 120
TCAGGGGAAT GTCTTCTGAA CATATATCAG GTGGTGGAGC TTCAAAGACG AAGAAACATA 180
AGTGGAGCTC AAGCCAGAAC CGACCCAAAC CAATGGGAGT TTCTAGACAG GAACGATCTG 240
TTCCTCTTGT ATCTCCTTCG AACTCGTTTG CGTCGGAGGA CGATCATCAC ATGTTGAAGA 300
TAAGTCTGAG CTCGATTTCG AAGCTTGAGG TTAGGAACTT GAAGCGGAAA CTAAAATCTG 360
AGCTTGATGA GGTTAGGAGC TTGATCAAAC GGTTCGATCC CGAAGCTAAT CCTGGTGGGT 420
CAATGGCTAA AAGTGGTGTT GTAGGGAGAA GCAAGAAGGT GAAAACAGGG AATGGAGGAG 480
GTAAGAAAAG TGGGCATGGA GCTGATAAAG GTACGGTTCA GATTTTTAAG AACTGTAACA 540
GTTTGCTTAC GAAATTGATG AAGCATAAGA GTGCATGGGT ATTCAATGTC CCTGTGGATG 600
CTAAAGGACT TGGCTTGCAT GATTATCACA ATATTGTTAA AGAGCCTATG GATTTGGGTA 660
CAGTGAAGAC TAAGTTGGGG AAAAGTTTGT ATAAGTCGCC ATTGGATTTC GCTGAAGATG 720
TTAGACTTAC TTTTAACAAT GCGATTTTGT ATAATCCGAT TGGGCATGAT GTGTATCGTT 780
TTGCTGAGCT TTTGTTGAAC ATGTTTGAAG ATAAATGGGT ATCCATTGAA ATGCAGTATG 840
ATAATCTTCA TAGGAAGTTC AAACCAACTC GTGATATTGA GTTCCCTGCT CCTGCTCCAT 900
CCATTGCTCC TATTGTAGAG CCATTACCTG CCATTGTTCC TTCACCATCC CCGTCTTCTC 960
CTCCTCCTCC TCCACCGCCA CCAGTAGCAG CTCCGGTACT TGAAAATAGG ACTTGGGAGA 1020
GAGAAGAATC TATGACAATC CCTGTGGAAC CTGAAGCTGT AATTACTGCT CCAGAGAAAG 1080
CTGAAGAAGA GGAAGCACCT GTTAACAACA GGGACCTCAC CTTGGAAGAG AAACGGAGAC 1140
TCAGTGAAGA GCTTCAAGAC TTGCCTTATG ACAAACTAGA GACTGTTGTT CAGATCATAA 1200
AGAAGAGCAA TCCAGAGCTC TCTCAAAAAG ATGATGAGAT TGAGCTGGAT ATTGATAGTC 1260
TTGATATCAA CACGCTTTGG GAGCTTTATA GATTTGTGAC TGGGTATAAG GAGAGCTTGA 1320
GCAAGAAAAA CGAGGCTCAT GGATTTGGTT CAGAAAGAGA TGCTGAATCT GTTCACAATA 1380
GTATTCAAGA ACCTACCACT TTAGTAAGTG GCACCACAAC ATCGAGAGTT ACTGAATCAG 1440
GAAAAGCAAT TCGCACATCA TCTCCTGCTC GGCAAGAAAA CAATGCAAGT GGATCAAGTA 1500
GTTCTAACAG TTCTAGTAGT GACTCAGGAT CTTGCTCTAG TGATACTGAC AGTGACAGCT 1560
CTTCAGGACG TGGATCAGAT AATGGTAATT AGGCCAACAA GTCGAAAGTC TTTTAGCTTT 1620
AGAGTCAGAA CCGTCATGCT GTTTGATCTC TTTCAATAGC ACAGTTAGAT TGATTACACT 1680
AAGTCGATAA CTCTTCCCAA AAGGATTGAT TCCTGTATTG CGATTTTTTA CTGTACAGAA 1740
AAATGAAACC ATTTAATGTT TTCTTCTC 1769
Sequence Source Ensembl
Keyword

KW-0103--Bromodomain
KW-0150--Chloroplast
KW-0181--Complete proteome
KW-0934--Plastid
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0809--Transit peptide
KW-0832--Ubl conjugation
--
Interpro

IPR001487--Bromodomain
IPR027353--NET_dom
PROSITE

PS50014--BROMODOMAIN_2
PS51525--NET
Pfam

PF17035--BET
PF00439--Bromodomain
Gene Ontology

GO:0009507--C:chloroplast
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0031 fgenesh1_pm.C_scaffold_1001524 Arabidopsis lyrata 89 0.0 642
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 65 1e-133 473
WERAM-Brr-0083 Bra016586.1-P Brassica rapa 66 5e-133 471
WERAM-Thc-0085 EOY13187 Theobroma cacao 47 3e-63 239
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 44 1e-58 224
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 44 2e-58 223
WERAM-Prp-0055 EMJ15030 Prunus persica 43 3e-58 223
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 41 3e-57 220
WERAM-Sot-0105 PGSC0003DMT400032373 Solanum tuberosum 43 4e-57 219
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 42 2e-56 217
WERAM-Amt-0025 ERN13953 Amborella trichopoda 50 2e-56 217
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 46 1e-55 215
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 38 4e-55 213
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 38 2e-53 207
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 44 3e-53 206
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 48 2e-52 204
WERAM-Met-0054 KEH39252 Medicago truncatula 43 2e-52 204
WERAM-Sei-0009 Si001167m Setaria italica 41 3e-51 200
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 46 6e-51 199
WERAM-Aet-0058 EMT09500 Aegilops tauschii 46 2e-48 191
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 46 1e-40 165
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 62 1e-38 158
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 46 2e-38 157
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 62 2e-38 157
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 63 2e-38 157
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 62 4e-38 156
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 62 1e-37 155
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 62 1e-37 155
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 62 1e-37 155
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 58 3e-37 153
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 51 8e-34 142
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 58 4e-33 140
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 59 7e-33 139
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 65 9e-33 139
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 57 2e-32 137
WERAM-Drm-0012 FBpp0071074 Drosophila melanogaster 51 2e-23 107
Created Date 25-Jun-2016