WERAM Information

Tag Content
WERAM ID WERAM-Sol-0076
Ensembl Protein ID Solyc06g051420.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc06g051420.2 Solyc06g051420.2.1 Solyc06g051420.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.90e-13 50.1 188 238
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C  Cg++++++++++ Cd C++w+H+kCvk++  ++++ k+++CpsC +
  Solyc06g051420.2.1 188 TLCGSCGTNGNEDEFWIGCDICEKWYHGKCVKITPAKAQSIKEYRCPSCSN 238
                         78****988888899*******************666665589******86 PP
Protein Sequence
(Fasta)		MATNSSSHSP RTVEEIFKDF SARHAAVLRA LTTDVEDFYS QCDPERDNLC LYGHPNESWE 60
VAVPAEEVPP ELPEPVLGIN FARDGMERRD WLSLVAMHTD SWLLSVAFYF GARLNRNERS 120
RVFTLINDLP TVFEAVTGRK PLKDKPSVDS GKKSKNNAKR EKQMKANQRL QEESDDEDEG 180
NEDEHEETLC GSCGTNGNED EFWIGCDICE KWYHGKCVKI TPAKAQSIKE YRCPSCSNKR 240
AKHMA 245
Nucleotide Sequence
(Fasta)		GGGGAGTCTG CAGTGTACTT ATTTGTCCTA CACCCAGAAA TAGGTGTGAC TTGTAATTGA 60
CTAACGCATG GCTACCAACT CTTCCTCCCA TAGCCCTCGC ACCGTCGAGG AGATCTTCAA 120
AGACTTCTCC GCCCGTCACG CCGCCGTCCT CCGTGCCCTC ACTACAGATG TGGAGGATTT 180
TTACTCACAG TGCGATCCAG AGAGAGACAA TTTGTGTTTG TATGGACATC CGAATGAGTC 240
TTGGGAAGTT GCTGTTCCGG CCGAGGAAGT TCCGCCGGAG TTACCGGAGC CGGTGTTAGG 300
TATCAATTTT GCTAGGGATG GGATGGAGCG TAGAGACTGG TTGTCTTTGG TTGCTATGCA 360
CACAGATTCG TGGCTGCTCT CTGTCGCTTT CTACTTTGGT GCTCGCTTAA ACAGAAATGA 420
AAGGAGTCGT GTGTTTACCC TGATAAATGA TCTACCAACT GTCTTTGAAG CCGTGACAGG 480
GAGGAAGCCT TTAAAGGACA AACCTAGTGT TGATAGTGGA AAGAAATCAA AGAACAATGC 540
AAAGAGAGAA AAACAAATGA AAGCAAATCA AAGGCTGCAA GAGGAGAGTG ATGATGAGGA 600
TGAAGGGAAT GAAGATGAGC ATGAAGAAAC TCTATGTGGA AGTTGTGGAA CAAATGGCAA 660
TGAGGATGAG TTCTGGATTG GCTGTGATAT ATGTGAAAAG TGGTATCATG GCAAGTGTGT 720
GAAAATAACT CCTGCAAAGG CTCAAAGTAT CAAGGAATAC AGATGTCCTT CATGCAGCAA 780
TAAAAGGGCA AAACATATGG CTTGAGTTAA TAGCTTTAGG AAGAGTTGAG TTCATGTTAG 840
CATAACCTGA AGATTCCTTA AATCTGCAGA TGAACCCCCT GACCTGCACA ACTCCCATTC 900
TGCAGCCCCT TACTCTGTCT TTAATTTATA CTTTTGTTTC TTTTCTCAGA AGTTATTTCT 960
GTTTGTCGTT AGTTTACAGA TGTAGCTTTA TATCAGGAGG GATAAAATCA AGTTCCTTGT 1020
AACTGTTGGC ATGTTCAGTT CCTTTTCGTA TAACTCTATT AAAAACTGCT GCTTTCTTTC 1080
TTCT 1085
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0085 EMJ19499 Prunus persica 73 9e-89 323
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 71 2e-87 318
WERAM-Met-0092 KEH28874 Medicago truncatula 73 6e-87 317
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 70 6e-86 313
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 74 1e-85 313
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 71 1e-85 313
WERAM-Thc-0059 EOY07191 Theobroma cacao 70 2e-85 312
WERAM-Amt-0010 ERN05231 Amborella trichopoda 70 8e-84 306
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 69 2e-83 305
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 70 9e-83 303
WERAM-Mua-0047 GSMUA_Achr2P18960_001 Musa acuminata 64 3e-82 301
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 68 2e-81 299
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 68 2e-81 299
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 62 2e-78 289
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 62 4e-75 278
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 62 6e-75 277
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 62 6e-75 277
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 1e-74 276
WERAM-Sei-0134 Si037171m Setaria italica 61 2e-74 275
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 62 3e-74 275
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 64 7e-74 273
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 61 9e-74 273
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 64 2e-73 272
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 64 2e-73 272
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 64 2e-73 272
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 64 3e-73 271
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 65 6e-73 270
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 61 8e-73 270
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 63 2e-72 269
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 61 3e-72 268
WERAM-Brd-0001 BRADI1G03900.1 Brachypodium distachyon 59 3e-71 265
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 59 3e-70 261
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 59 3e-70 261
WERAM-Aet-0099 EMT23706 Aegilops tauschii 53 3e-65 245
Created Date 25-Jun-2016