WERAM Information

Tag Content
WERAM ID WERAM-Sob-0120
Ensembl Protein ID Sb09g018336.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g018336 Sb09g018336.1 Sb09g018336.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-08 35.9 348 386
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslp 40 
                    ++C  C+ +++ + ++++CdeC +w+H kCv+++ s+++
  Sb09g018336.1 348 DYCASCNSRYKANAFWICCDECGKWYHEKCVNITSSEAE 386
                    69****99999999********************66665 PP
Protein Sequence
(Fasta)		MDSGGSSHTS GDEFFAENFR IVVRLPAMSS RPESDTSDSD DELSAEAFCV VRRCKKPRPE 60
PDTDQDHDGA ADSGYVLTPT MAALSPLPSP RSESGARRRR QPTTRRAPTP HYTVESIFDD 120
FKKRRGALIR ALTEDVCIQV LITVQSAIFF SIEASSTSSF RLTNYEEAFF QKCDPGMQPL 180
HLYGGRNGSW EVKPPALKLR APAMPEPTPG INIWRDTMER QKWLQKVAVH CDEWLMKISS 240
FAAKYIAATE RVLLFTMLTD LPSIEEILLA NSDMSRCMYH IEEKSSSGPE ANAVVEEEKE 300
ERSSGPDEAN EVVEEQEVYY MEEQRSSGPT KANEVLEEED DVINDDNDYC ASCNSRYKAN 360
AFWICCDECG KWYHEKCVNI TSSEAEHKE 389
Nucleotide Sequence
(Fasta)		ATGGACTCCG GCGGCTCCTC CCACACCTCC GGCGACGAGT TCTTTGCAGA GAATTTCCGT 60
ATCGTCGTTC GCCTGCCTGC CATGAGCTCC CGCCCCGAGT CCGACACCTC CGACTCCGAC 120
GACGAGTTGT CCGCTGAGGC TTTCTGTGTC GTTCGCCGCT GCAAGAAGCC GCGACCAGAA 180
CCAGACACAG ATCAGGATCA CGATGGTGCG GCCGATTCTG GGTACGTGCT CACCCCGACC 240
ATGGCGGCGC TATCGCCGCT CCCTAGTCCT CGGTCTGAAT CTGGTGCCCG CCGGAGGCGC 300
CAGCCGACCA CACGCCGGGC TCCGACGCCG CACTACACAG TGGAGAGTAT CTTCGACGAC 360
TTCAAGAAAC GCCGCGGAGC CCTTATCCGT GCGCTCACAG AAGATGTATG CATCCAGGTA 420
CTAATAACAG TGCAAAGCGC AATTTTTTTT TCGATTGAAG CTTCATCCAC CAGTTCTTTC 480
AGGCTGACAA ATTATGAAGA GGCGTTCTTT CAGAAATGTG ATCCAGGTAT GCAGCCCCTA 540
CACTTATATG GCGGCAGGAA TGGGAGCTGG GAGGTGAAAC CACCGGCATT GAAGCTGCGA 600
GCACCAGCGA TGCCTGAGCC AACACCTGGC ATCAATATAT GGAGGGACAC GATGGAACGG 660
CAGAAGTGGC TGCAAAAAGT TGCTGTGCAC TGTGATGAAT GGCTTATGAA GATTTCCAGC 720
TTCGCTGCTA AATATATAGC AGCTACAGAA CGGGTTCTGC TGTTCACTAT GCTCACCGAT 780
CTGCCATCAA TCGAAGAAAT ATTACTGGCT AACAGCGACA TGTCCAGATG CATGTACCAT 840
ATAGAAGAAA AGAGCTCTAG TGGTCCAGAA GCCAATGCGG TGGTTGAGGA GGAGAAAGAG 900
GAGAGATCTA GTGGCCCAGA TGAAGCCAAT GAGGTGGTGG AGGAACAGGA GGTATACTAT 960
ATGGAAGAGC AGAGATCTAG TGGTCCTACT AAAGCCAATG AAGTGCTGGA GGAGGAAGAT 1020
GATGTTATAA ATGATGATAA CGACTATTGT GCTAGTTGCA ATAGTCGCTA CAAGGCAAAC 1080
GCATTTTGGA TTTGCTGTGA CGAGTGTGGA AAATGGTACC ATGAAAAATG TGTAAATATA 1140
ACATCTAGCG AAGCAGAGCA TAAGGAA 1168
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 33 5e-36 149
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 36 4e-32 136
WERAM-Brd-0001 BRADI1G03900.1 Brachypodium distachyon 32 5e-32 135
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 34 2e-31 134
WERAM-Sei-0039 Si010912m Setaria italica 32 5e-31 132
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 34 6e-31 132
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 34 6e-31 132
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 34 6e-31 132
WERAM-Ori-0031 BGIOSGA009559-PA Oryza indica 34 6e-31 132
WERAM-Orgl-0042 OGLUM03G38760.1 Oryza glumaepatula 34 6e-31 132
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 34 7e-31 132
WERAM-Org-0041 ORGLA03G0356800.1 Oryza glaberrima 34 7e-31 132
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 34 3e-30 130
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 32 3e-30 130
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 33 4e-30 129
WERAM-Thc-0075 EOY26404 Theobroma cacao 32 7e-30 129
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 32 1e-29 128
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 32 1e-29 128
WERAM-Met-0117 KEH32736 Medicago truncatula 31 1e-29 128
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 32 1e-29 127
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 32 1e-29 127
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 31 1e-29 127
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 32 2e-29 127
WERAM-Aet-0073 EMT09936 Aegilops tauschii 30 2e-29 127
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 32 3e-29 127
WERAM-Amt-0032 ERN11177 Amborella trichopoda 32 3e-29 127
WERAM-Prp-0081 EMJ24886 Prunus persica 32 3e-29 126
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 33 4e-29 126
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 32 1e-28 124
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 31 5e-28 122
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 31 1e-27 121
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 30 5e-26 115
WERAM-Tru-0101 TRIUR3_35276-P1 Triticum urartu 30 9e-26 115
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 30 2e-25 114
WERAM-Sem-0057 EFJ21827 Selaginella moellendorffii 30 1e-24 111
Created Date 25-Jun-2016