WERAM Information

Tag Content
WERAM ID WERAM-Sus-0037
Ensembl Protein ID ENSSSCP00000006110.2
Gene Name PRDM12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000005703.2 ENSSSCT00000006272.2 ENSSSCP00000006110.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 8.90e-48 161.6 89 205
Organism Sus scrofa
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           ev +a+ssip+eglg+++k++i++g+++GPf+G++ ++e+v+ ++n++l+we+++++g+v+y++Das+e++++W++y+++Ar+++eqNL
  ENSSSCP00000006110.2  89 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNL 177
                           7899************************************************************************************* PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           +++qi+++ifYk+i++I+pd+ELLvwy+
  ENSSSCP00000006110.2 178 EVVQIGTSIFYKAIEMIPPDQELLVWYG 205
                           ***************************6 PP
Protein Sequence
(Fasta)		MMGSVLPAEA LVLKTGLKAP GLALAEVITS DILHSFLYGR WRNVLGEQLF EDKSHHASPK 60
TAFTAEVLAQ SFSGATEVQK LSSLVLPAEV IIAQSSIPGE GLGIFSKTWI KAGTEMGPFT 120
GRVIAPEHVD ICKNNNLMWE VFNEDGTVRY FIDASQEDHR SWMTYIKCAR NEQEQNLEVV 180
QIGTSIFYKA IEMIPPDQEL LVWYGNSHNT FLGIPGVPGL EEEQKKNKHE DFHPADSAAG 240
TAGRMRCVIC HRGFNSRSNL RSHMRIHTLD KPFVCRFCNR RFSQSSTLRN HVRLHTGERP 300
YKCQVCQSAY SQLAGLRAHQ KSARHRPPSA ALQAHSPALP APHAHAPALA AAAAAAAAHH 360
LPAMVL 366
Nucleotide Sequence
(Fasta)		ATGATGGGCT CCGTGCTCCC GGCTGAGGCC CTGGTGCTCA AGACGGGGCT GAAGGCGCCG 60
GGGCTGGCGC TGGCAGAGGT CATCACCTCG GACATTCTGC ACAGCTTCCT GTACGGCCGC 120
TGGCGCAACG TGCTGGGCGA GCAGCTCTTC GAAGACAAGA GCCACCACGC CAGCCCCAAG 180
ACAGCCTTCA CCGCCGAGGT CCTGGCACAG TCCTTCTCCG GCGCCACAGA GGTTCAGAAG 240
CTGTCCAGCC TGGTGCTGCC GGCGGAGGTG ATCATTGCGC AGAGCTCCAT TCCCGGCGAG 300
GGCCTTGGCA TCTTCTCCAA GACGTGGATC AAGGCGGGCA CGGAGATGGG CCCCTTCACC 360
GGCCGCGTCA TCGCTCCCGA GCATGTGGAC ATCTGCAAGA ACAACAACCT CATGTGGGAG 420
GTGTTCAATG AGGACGGCAC GGTGCGCTAC TTCATCGACG CCAGCCAGGA GGACCACCGA 480
AGCTGGATGA CCTACATCAA ATGTGCACGG AACGAGCAGG AGCAGAACCT GGAGGTCGTC 540
CAGATCGGAA CCAGCATCTT CTACAAGGCC ATCGAGATGA TCCCTCCCGA CCAGGAACTG 600
CTGGTGTGGT ATGGAAACTC GCACAACACC TTCCTGGGTA TCCCTGGTGT GCCTGGGCTG 660
GAGGAGGAGC AGAAAAAGAA CAAGCATGAG GACTTCCACC CGGCGGATTC GGCCGCGGGC 720
ACTGCGGGCC GCATGCGCTG CGTCATCTGT CACCGCGGCT TCAACTCGCG CAGCAACCTG 780
CGCTCGCACA TGCGCATCCA CACGCTGGAC AAGCCCTTCG TGTGCCGCTT CTGCAACCGC 840
CGCTTCAGCC AGTCGTCCAC GCTGCGCAAC CACGTGCGCC TGCACACGGG CGAGCGCCCC 900
TACAAGTGCC AGGTGTGCCA GAGCGCTTAC TCGCAGCTGG CCGGCCTGCG CGCGCACCAG 960
AAGAGCGCGC GCCACCGGCC GCCCAGCGCC GCGCTGCAGG CCCACTCGCC CGCGCTGCCC 1020
GCGCCGCACG CGCACGCGCC CGCGCTCGCC GCCGCCGCCG CTGCCGCCGC CGCGCACCAC 1080
CTGCCGGCCA TGGTGCTGTG A 1102
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 100 0.0 686
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 99 0.0 680
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 99 0.0 677
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 99 0.0 677
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 99 0.0 675
WERAM-Paa-0213 ENSPANP00000018834.1 Papio anubis 99 0.0 674
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 99 0.0 674
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 99 0.0 674
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 99 0.0 674
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 99 0.0 673
WERAM-Ran-0059 ENSRNOP00000012234.3 Rattus norvegicus 98 0.0 672
WERAM-Mum-0228 ENSMUSP00000109098.2 Mus musculus 98 0.0 672
WERAM-Loa-0078 ENSLAFP00000005864.3 Loxodonta africana 98 0.0 671
WERAM-Ocp-0088 ENSOPRP00000007941.1 Ochotona princeps 98 0.0 668
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 98 0.0 667
WERAM-Sah-0180 ENSSHAP00000018820.1 Sarcophilus harrisii 96 0.0 657
WERAM-Mod-0098 ENSMODP00000015165.2 Monodelphis domestica 96 0.0 657
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 98 0.0 654
WERAM-Caj-0218 ENSCJAP00000038158.1 Callithrix jacchus 97 0.0 654
WERAM-Pes-0052 ENSPSIP00000007299.1 Pelodiscus sinensis 93 0.0 642
WERAM-Fia-0018 ENSFALP00000001507.1 Ficedula albicollis 94 0.0 636
WERAM-Gaga-0041 ENSGALP00000006182.3 Gallus gallus 94 0.0 636
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 94 0.0 635
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 91 1e-180 629
WERAM-Aim-0182 ENSAMEP00000017138.1 Ailuropoda melanoleuca 92 2e-180 628
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 88 9e-172 600
WERAM-Asm-0075 ENSAMXP00000007875.1 Astyanax mexicanus 88 2e-171 598
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 95 2e-170 595
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 83 1e-168 589
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 83 2e-168 588
WERAM-Caf-0210 ENSCAFP00000030461.2 Canis familiaris 98 3e-167 585
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 85 2e-166 582
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 83 1e-165 580
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 84 1e-165 579
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 83 2e-164 575
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 84 3e-163 572
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 83 2e-162 569
WERAM-Orn-0028 ENSONIP00000003595.1 Oreochromis niloticus 81 2e-162 569
WERAM-Mae-0037 ENSMEUP00000003491.1 Macropus eugenii 84 9e-160 560
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 82 2e-154 542
WERAM-Ova-0077 ENSOARP00000008071.1 Ovis aries 81 2e-151 532
WERAM-Myl-0140 ENSMLUP00000011265.2 Myotis lucifugus 97 8e-144 507
WERAM-Tut-0169 ENSTTRP00000014364.1 Tursiops truncatus 85 1e-135 480
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 92 4e-132 468
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 99 4e-132 468
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 97 1e-127 453
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 91 9e-123 437
WERAM-Eqc-0024 ENSECAP00000004143.1 Equus caballus 95 9e-100 360
WERAM-Mup-0145 ENSMPUP00000012594.1 Mustela putorius furo 99 2e-65 247
WERAM-Tag-0067 ENSTGUP00000004826.1 Taeniopygia guttata 96 2e-63 240
WERAM-Anc-0161 ENSACAP00000014909.3 Anolis carolinensis 34 2e-42 170
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 34 4e-33 139
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 46 9e-31 131
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 30 1e-24 111
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 28 1e-22 104
WERAM-Chh-0063 ENSCHOP00000006916.1 Choloepus hoffmanni 29 4e-22 102
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 31 5e-22 102
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 25 3e-19 93.6
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 36 1e-18 91.7
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 35 1e-18 91.7
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 4e-18 89.7
WERAM-Pem-0105 ENSPMAP00000010842.1 Petromyzon marinus 32 8e-18 88.6
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 40 2e-17 87.0
Created Date 25-Jun-2016