WERAM Information

Tag Content
WERAM ID WERAM-Ran-0059
Ensembl Protein ID ENSRNOP00000012234.3
Gene Name Prdm12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000009218.3 ENSRNOT00000012234.3 ENSRNOP00000012234.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.40e-47 161.1 87 203
Organism Rattus norvegicus
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           ev +a+ssip+eglg+++k++i++g+++GPf+G++ ++e+v+ ++n++l+we+++++g+v+y++Das+e++++W++y+++Ar+++eqNL
  ENSRNOP00000012234.3  87 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNL 175
                           67899************************************************************************************ PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           +++qi+++ifYk+i++I+pd+ELLvwy+
  ENSRNOP00000012234.3 176 EVVQIGTSIFYKAIEMIPPDQELLVWYG 203
                           ***************************6 PP
Protein Sequence
(Fasta)		MMGSVLPAEA LVLKTGLKAP GLALAEVITS DILHSFLYGR WRNVLGEQLL EDKSHHASPK 60
TAFTAEVLAQ SFSGEVQKLS SLVLPVEVII AQSSIPGEGL GIFSKTWIKA GTEMGPFTGR 120
VIAPEHVDIC KNNNLMWEVF NEDGTVRYFI DASQEDHRSW MTYIKCARNE QEQNLEVVQI 180
GTSIFYKAIE MIPPDQELLV WYGNSHNTFL GIPGVPGLEE EQKKNKHEDF HPADSATGTA 240
GRMRCVICHR GFNSRSNLRS HMRIHTLDKP FVCRFCNRRF SQSSTLRNHV RLHTGERPYK 300
CQVCQSAYSQ LAGLRAHQKS ARHRPPSTAL QAHSPALPAP HAHAPALAAA AAAAAAAHHL 360
PAMVL 365
Nucleotide Sequence
(Fasta)		ATGATGGGCT CTGTGCTCCC AGCTGAGGCC CTGGTGCTCA AAACAGGGCT GAAGGCTCCG 60
GGGCTAGCGT TGGCAGAGGT CATCACCTCC GACATCCTGC ACAGTTTCTT ATATGGCCGA 120
TGGCGCAACG TGCTAGGCGA ACAGCTGCTC GAGGACAAGA GCCACCATGC CAGCCCAAAG 180
ACTGCCTTCA CCGCCGAGGT CTTGGCACAG TCCTTCTCGG GAGAGGTGCA GAAGCTATCT 240
AGCCTGGTGC TGCCGGTGGA AGTGATCATC GCCCAGAGTT CCATCCCTGG CGAGGGCCTT 300
GGCATCTTCT CCAAGACGTG GATCAAGGCA GGCACGGAGA TGGGCCCCTT CACTGGCCGA 360
GTCATCGCCC CAGAGCATGT GGATATCTGC AAAAACAACA ACCTGATGTG GGAGGTATTC 420
AACGAGGATG GGACAGTCCG CTACTTTATC GATGCCAGCC AGGAAGACCA CCGAAGCTGG 480
ATGACCTACA TCAAGTGTGC CCGGAACGAG CAGGAGCAGA ACCTGGAGGT GGTGCAGATA 540
GGCACTAGCA TCTTCTACAA GGCCATAGAG ATGATCCCTC CAGACCAGGA GCTGCTGGTG 600
TGGTATGGGA ATTCCCACAA CACCTTTCTG GGGATCCCAG GTGTGCCGGG ACTGGAAGAA 660
GAACAGAAGA AAAACAAGCA TGAGGACTTC CACCCGGCCG ACTCCGCGAC CGGTACCGCG 720
GGCCGCATGC GCTGCGTCAT CTGCCACCGC GGCTTCAACT CGCGCAGCAA CCTGCGCTCG 780
CACATGCGTA TCCACACGCT GGACAAGCCC TTCGTGTGCC GCTTCTGCAA CCGCCGCTTC 840
AGCCAGTCGT CCACGCTGCG CAACCACGTG CGCCTGCACA CGGGCGAGCG TCCCTACAAG 900
TGCCAGGTGT GCCAGAGCGC TTATTCGCAG CTGGCCGGCC TGCGCGCGCA CCAGAAGAGC 960
GCGCGCCACC GGCCACCCAG CACCGCGCTG CAGGCGCACT CGCCCGCGCT ACCCGCGCCT 1020
CACGCTCACG CGCCTGCGCT CGCCGCCGCG GCCGCCGCTG CCGCCGCGGC GCATCACCTG 1080
CCAGCCATGG TGCTGTGA 1099
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0228 ENSMUSP00000109098.2 Mus musculus 100 0.0 692
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 99 0.0 686
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 98 0.0 685
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 98 0.0 685
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 98 0.0 684
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 99 0.0 684
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 98 0.0 682
WERAM-Paa-0213 ENSPANP00000018834.1 Papio anubis 98 0.0 682
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 99 0.0 681
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 98 0.0 681
WERAM-Sus-0037 ENSSSCP00000006110.2 Sus scrofa 98 0.0 680
WERAM-Loa-0078 ENSLAFP00000005864.3 Loxodonta africana 97 0.0 676
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 98 0.0 676
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 98 0.0 675
WERAM-Ocp-0088 ENSOPRP00000007941.1 Ochotona princeps 98 0.0 674
WERAM-Mod-0098 ENSMODP00000015165.2 Monodelphis domestica 95 0.0 662
WERAM-Sah-0180 ENSSHAP00000018820.1 Sarcophilus harrisii 95 0.0 660
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 98 0.0 659
WERAM-Caj-0218 ENSCJAP00000038158.1 Callithrix jacchus 96 0.0 659
WERAM-Pes-0052 ENSPSIP00000007299.1 Pelodiscus sinensis 93 0.0 650
WERAM-Fia-0018 ENSFALP00000001507.1 Ficedula albicollis 93 0.0 641
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 93 0.0 640
WERAM-Gaga-0041 ENSGALP00000006182.3 Gallus gallus 93 0.0 640
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 91 0.0 636
WERAM-Aim-0182 ENSAMEP00000017138.1 Ailuropoda melanoleuca 93 0.0 634
WERAM-Asm-0075 ENSAMXP00000007875.1 Astyanax mexicanus 89 3e-174 608
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 87 2e-173 605
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 94 3e-171 598
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 83 8e-170 593
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 86 3e-169 591
WERAM-Caf-0210 ENSCAFP00000030461.2 Canis familiaris 98 4e-169 591
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 84 4e-168 587
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 83 1e-167 586
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 83 1e-166 583
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 84 3e-166 581
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 85 5e-165 577
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 83 1e-164 576
WERAM-Orn-0028 ENSONIP00000003595.1 Oreochromis niloticus 81 3e-164 575
WERAM-Mae-0037 ENSMEUP00000003491.1 Macropus eugenii 84 2e-161 565
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 82 2e-156 549
WERAM-Ova-0077 ENSOARP00000008071.1 Ovis aries 81 7e-153 537
WERAM-Myl-0140 ENSMLUP00000011265.2 Myotis lucifugus 96 7e-145 510
WERAM-Tut-0169 ENSTTRP00000014364.1 Tursiops truncatus 84 1e-135 479
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 91 2e-133 472
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 99 4e-132 468
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 97 9e-129 457
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 92 6e-123 437
WERAM-Eqc-0024 ENSECAP00000004143.1 Equus caballus 95 1e-100 363
WERAM-Mup-0145 ENSMPUP00000012594.1 Mustela putorius furo 99 2e-65 246
WERAM-Tag-0067 ENSTGUP00000004826.1 Taeniopygia guttata 95 5e-63 238
WERAM-Anc-0161 ENSACAP00000014909.3 Anolis carolinensis 36 4e-42 169
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 33 5e-33 139
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 46 1e-30 131
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 29 3e-24 110
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 28 1e-22 104
WERAM-Chh-0063 ENSCHOP00000006916.1 Choloepus hoffmanni 29 3e-22 103
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 30 2e-21 100
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 25 2e-19 94.0
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 29 3e-18 90.1
WERAM-Dio-0079 ENSDORP00000007870.1 Dipodomys ordii 26 3e-18 90.1
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 35 4e-18 89.7
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 40 9e-18 88.6
WERAM-Pem-0105 ENSPMAP00000010842.1 Petromyzon marinus 32 1e-17 87.8
Created Date 25-Jun-2016