WERAM Information

Tag Content
WERAM ID WERAM-Lac-0168
Ensembl Protein ID ENSLACP00000019977.1
Gene Name PRDM12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000017560.1 ENSLACT00000020115.1 ENSLACP00000019977.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 2.10e-47 160.3 87 203
Organism Latimeria chalumnae
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           ev +a+ssip+eglg+++k++i++g+++GPf+G++ ++e+v+ ++n++l+we+++++g+v+y+vDas+e++++W++y+++Ar+++eqNL
  ENSLACP00000019977.1  87 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDLCKNNNLMWEVFNEDGTVRYFVDASQEDHRSWMTYIKCARNEQEQNL 175
                           6889************************************************************************************* PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           +++qi+++ifYk++++I+pd+ELLvwy+
  ENSLACP00000019977.1 176 EVVQIGNSIFYKAVETIPPDQELLVWYG 203
                           ***************************6 PP
Protein Sequence
(Fasta)		SMGSVLPAEA LVLKSGLKQQ GLSLAEIITS DILHSFLYGR WRNVLGEQLF EEKTNHSNPK 60
TAFTAEVLAQ SFSGEVQKLS SLVLPSEVII AQSSIPGEGL GIFSKTWIKA GTEMGPFTGR 120
VIAPEHVDLC KNNNLMWEVF NEDGTVRYFV DASQEDHRSW MTYIKCARNE QEQNLEVVQI 180
GNSIFYKAVE TIPPDQELLV WYGNSHNTFL GIPGVPSSDE EQKKSKHDDF HSVDNPSASA 240
GRMRCVICHR GFNSRSNLRS HMRIHTLDKP FVCRFCNRRF SQSSTLRNHV RLHTGERPYK 300
CQVCQSAYSQ LAGLRAHQKS ARHRPPNNSL QPHSPALPVP HPATLAHHIP TMVL 354
Nucleotide Sequence
(Fasta)		AGTATGGGTT CTGTGCTCCC AGCTGAGGCT TTGGTTCTAA AATCTGGACT GAAGCAGCAG 60
GGATTGTCCC TGGCTGAAAT TATCACTTCT GATATTCTCC ACAGTTTTCT CTATGGGAGA 120
TGGAGAAATG TTCTGGGAGA GCAGCTCTTT GAAGAGAAAA CCAACCACAG TAACCCCAAA 180
ACTGCCTTCA CTGCTGAAGT TCTGGCTCAG TCCTTCTCGG GGGAAGTTCA GAAGTTGTCC 240
AGTTTGGTCC TTCCTTCTGA GGTGATCATT GCTCAAAGCT CCATCCCAGG AGAAGGGCTG 300
GGGATTTTTT CCAAGACTTG GATCAAAGCT GGTACAGAAA TGGGACCTTT TACTGGTAGA 360
GTCATCGCAC CTGAACATGT GGACCTGTGT AAGAATAATA ACCTGATGTG GGAGGTATTT 420
AATGAAGATG GGACCGTGCG CTATTTTGTT GATGCCAGTC AGGAGGATCA CAGGAGCTGG 480
ATGACCTACA TCAAATGTGC CCGCAATGAG CAGGAGCAGA ACCTGGAGGT GGTGCAGATC 540
GGCAACAGCA TCTTTTACAA AGCAGTGGAG ACCATCCCGC CTGACCAGGA GTTGCTGGTT 600
TGGTACGGAA ATTCCCATAA CACCTTCTTG GGGATTCCCG GTGTTCCAAG TTCAGATGAG 660
GAGCAGAAAA AGAGCAAGCA TGATGATTTC CATTCTGTTG ACAACCCCAG CGCCAGTGCA 720
GGCCGCATGC GCTGCGTCAT CTGCCACCGA GGATTCAACT CCCGCAGCAA CCTGCGCTCC 780
CACATGCGCA TCCACACACT GGACAAGCCC TTCGTCTGCC GCTTCTGCAA CCGCCGCTTC 840
AGCCAGTCCT CCACCCTGCG CAACCATGTC CGGCTGCATA CTGGCGAGCG CCCGTACAAG 900
TGCCAGGTGT GCCAGAGCGC CTACTCCCAG CTGGCAGGCC TCCGGGCTCA CCAGAAGAGT 960
GCCAGACACC GCCCCCCTAA CAACTCCCTG CAGCCGCATT CCCCCGCCCT GCCTGTCCCC 1020
CACCCGGCTA CACTAGCACA CCACATCCCT ACCATGGTGC TGTGA 1066
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mod-0098 ENSMODP00000015165.2 Monodelphis domestica 92 0.0 692
WERAM-Fia-0018 ENSFALP00000001507.1 Ficedula albicollis 92 0.0 687
WERAM-Gaga-0041 ENSGALP00000006182.3 Gallus gallus 92 0.0 687
WERAM-Pes-0052 ENSPSIP00000007299.1 Pelodiscus sinensis 92 0.0 686
WERAM-Sah-0180 ENSSHAP00000018820.1 Sarcophilus harrisii 92 0.0 686
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 92 0.0 675
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 90 0.0 654
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 89 0.0 648
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 90 0.0 646
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 86 0.0 645
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 90 0.0 645
WERAM-Ran-0059 ENSRNOP00000012234.3 Rattus norvegicus 90 0.0 645
WERAM-Mum-0228 ENSMUSP00000109098.2 Mus musculus 90 0.0 645
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 90 0.0 645
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 90 0.0 645
WERAM-Paa-0213 ENSPANP00000018834.1 Papio anubis 90 0.0 644
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 90 0.0 644
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 90 0.0 643
WERAM-Sus-0037 ENSSSCP00000006110.2 Sus scrofa 90 0.0 643
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 90 0.0 640
WERAM-Loa-0078 ENSLAFP00000005864.3 Loxodonta africana 89 0.0 639
WERAM-Caj-0218 ENSCJAP00000038158.1 Callithrix jacchus 88 0.0 637
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 90 0.0 637
WERAM-Ocp-0088 ENSOPRP00000007941.1 Ochotona princeps 89 0.0 631
WERAM-Asm-0075 ENSAMXP00000007875.1 Astyanax mexicanus 84 5e-180 627
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 84 6e-179 624
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 90 2e-175 612
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 81 2e-174 608
WERAM-Mae-0037 ENSMEUP00000003491.1 Macropus eugenii 83 6e-174 607
WERAM-Aim-0182 ENSAMEP00000017138.1 Ailuropoda melanoleuca 87 2e-173 605
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 79 2e-172 602
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 81 6e-172 600
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 81 4e-171 597
WERAM-Orn-0028 ENSONIP00000003595.1 Oreochromis niloticus 79 6e-170 593
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 79 2e-169 592
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 82 3e-168 588
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 80 7e-168 587
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 87 2e-163 572
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 80 3e-163 571
WERAM-Caf-0210 ENSCAFP00000030461.2 Canis familiaris 90 5e-162 567
WERAM-Ova-0077 ENSOARP00000008071.1 Ovis aries 77 1e-147 520
WERAM-Myl-0140 ENSMLUP00000011265.2 Myotis lucifugus 88 1e-138 490
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 82 8e-132 467
WERAM-Tut-0169 ENSTTRP00000014364.1 Tursiops truncatus 78 4e-127 451
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 94 5e-125 444
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 91 5e-123 438
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 89 1e-118 423
WERAM-Eqc-0024 ENSECAP00000004143.1 Equus caballus 90 1e-96 350
WERAM-Tag-0067 ENSTGUP00000004826.1 Taeniopygia guttata 96 1e-64 244
WERAM-Mup-0145 ENSMPUP00000012594.1 Mustela putorius furo 91 3e-61 233
WERAM-Anc-0161 ENSACAP00000014909.3 Anolis carolinensis 36 1e-42 171
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 34 1e-33 141
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 45 5e-31 132
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 30 3e-25 113
WERAM-Chh-0063 ENSCHOP00000006916.1 Choloepus hoffmanni 29 2e-22 104
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 26 6e-22 102
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 30 1e-21 101
WERAM-Dio-0079 ENSDORP00000007870.1 Dipodomys ordii 26 1e-19 94.4
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 27 2e-19 93.6
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 27 3e-19 93.6
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 35 2e-18 90.9
WERAM-Pem-0105 ENSPMAP00000010842.1 Petromyzon marinus 34 2e-18 90.5
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 40 1e-17 88.2
Created Date 25-Jun-2016