WERAM Information

Tag Content
WERAM ID WERAM-Sah-0180
Ensembl Protein ID ENSSHAP00000018820.1
Gene Name PRDM12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000015972.1 ENSSHAT00000018975.1 ENSSHAP00000018820.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 6.70e-48 161.8 88 204
Organism Sarcophilus harrisii
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           ev +a+ssip+eglg+++k++i++g+++GPf+G++  +e+v+ ++n++l+we+++++g+v+y++Das+e++++W++y+++Ar+++eqNL
  ENSSHAP00000018820.1  88 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVISPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNL 176
                           6889************************************************************************************* PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           +++qi+++ifYk+i++I+pd+ELLvwy+
  ENSSHAP00000018820.1 177 EVVQIGNNIFYKAIEMIPPDQELLVWYG 204
                           ***************************6 PP
Protein Sequence
(Fasta)		MMGSVLPAEA LVLKTGLKPQ GLSLAEVITS DILHSFLYGR WRNVLGEQLF EEKSHHANPK 60
TAFTAEVLAQ SFSGAEVQKL SSLVLPSEVI IAQSSIPGEG LGIFSKTWIK AGTEMGPFTG 120
RVISPEHVDI CKNNNLMWEV FNEDGTVRYF IDASQEDHRS WMTYIKCARN EQEQNLEVVQ 180
IGNNIFYKAI EMIPPDQELL VWYGNSHNTF LGIPGVPGLE EEQKKNKHED FHPVDTATNT 240
AGRMRCVICH RGFNSRSNLR SHMRIHTLDK PFVCRFCNRR FSQSSTLRNH VRLHTGERPY 300
KCQVCQSAYS QLAGLRAHQK SARHRPPNAS LQAHSPALPV PHPTSLAAHH IPTMVL 356
Nucleotide Sequence
(Fasta)		ATGATGGGCT CGGTGCTCCC CGCGGAAGCC CTGGTGCTGA AGACTGGCCT GAAGCCGCAA 60
GGGCTATCTC TGGCAGAGGT GATCACCTCC GACATCCTGC ACAGCTTCCT ATATGGTCGC 120
TGGCGGAACG TGCTGGGAGA ACAGCTCTTC GAAGAAAAGT CTCACCACGC CAATCCCAAG 180
ACTGCCTTCA CCGCAGAGGT CCTGGCGCAG TCCTTCTCCG GAGCAGAGGT GCAGAAGCTG 240
TCGAGTCTGG TGCTGCCATC TGAAGTGATC ATCGCTCAGA GCTCCATCCC CGGGGAGGGT 300
CTGGGTATCT TCTCCAAGAC TTGGATCAAA GCAGGCACTG AGATGGGTCC TTTCACAGGC 360
AGGGTCATCT CTCCCGAGCA TGTGGACATC TGCAAGAATA ACAACCTGAT GTGGGAGGTA 420
TTCAATGAAG ATGGCACAGT TAGATATTTC ATTGATGCAA GCCAAGAAGA TCATCGAAGT 480
TGGATGACTT ATATCAAATG TGCCCGAAAT GAGCAAGAAC AAAATCTGGA GGTGGTACAA 540
ATTGGCAACA ATATCTTCTA CAAGGCAATT GAGATGATTC CTCCGGATCA AGAACTGCTA 600
GTTTGGTATG GGAACTCCCA CAATACTTTC CTGGGAATTC CCGGTGTCCC AGGGTTGGAA 660
GAAGAACAGA AGAAGAACAA ACATGAGGAC TTCCACCCAG TGGACACTGC CACCAACACT 720
GCGGGCCGCA TGCGCTGCGT CATCTGCCAC CGGGGCTTCA ACTCCCGCAG CAATTTGCGC 780
TCTCACATGC GTATCCACAC CCTGGACAAA CCCTTCGTCT GCCGCTTTTG CAACCGGCGC 840
TTCAGCCAGT CCTCTACCCT CCGCAACCAC GTCCGCCTGC ACACTGGCGA GCGCCCGTAC 900
AAGTGCCAGG TGTGCCAGAG CGCCTACTCC CAGCTGGCGG GGCTGCGGGC GCACCAGAAG 960
AGCGCCCGCC ATCGACCCCC CAATGCCTCC CTGCAGGCCC ACTCCCCCGC TCTGCCCGTG 1020
CCCCATCCCA CCTCCCTGGC AGCGCACCAC ATCCCCACCA TGGTGCTGTG A 1072
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mod-0098 ENSMODP00000015165.2 Monodelphis domestica 99 0.0 735
WERAM-Fia-0018 ENSFALP00000001507.1 Ficedula albicollis 96 0.0 701
WERAM-Gaga-0041 ENSGALP00000006182.3 Gallus gallus 96 0.0 701
WERAM-Pes-0052 ENSPSIP00000007299.1 Pelodiscus sinensis 94 0.0 697
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 95 0.0 690
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 92 0.0 686
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 95 0.0 680
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 96 0.0 677
WERAM-Sus-0037 ENSSSCP00000006110.2 Sus scrofa 95 0.0 675
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 93 0.0 673
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 96 0.0 672
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 95 0.0 671
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 95 0.0 671
WERAM-Ran-0059 ENSRNOP00000012234.3 Rattus norvegicus 95 0.0 669
WERAM-Mum-0228 ENSMUSP00000109098.2 Mus musculus 95 0.0 669
WERAM-Paa-0213 ENSPANP00000018834.1 Papio anubis 95 0.0 668
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 95 0.0 668
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 94 0.0 667
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 94 0.0 667
WERAM-Loa-0078 ENSLAFP00000005864.3 Loxodonta africana 94 0.0 665
WERAM-Caj-0218 ENSCJAP00000038158.1 Callithrix jacchus 92 0.0 662
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 94 0.0 660
WERAM-Ocp-0088 ENSOPRP00000007941.1 Ochotona princeps 94 0.0 655
WERAM-Mae-0037 ENSMEUP00000003491.1 Macropus eugenii 88 0.0 640
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 85 0.0 634
WERAM-Cap-0072 ENSCPOP00000005323.2 Cavia porcellus 95 0.0 633
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 82 7e-177 617
WERAM-Aim-0182 ENSAMEP00000017138.1 Ailuropoda melanoleuca 90 8e-177 617
WERAM-Asm-0075 ENSAMXP00000007875.1 Astyanax mexicanus 83 3e-176 615
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 79 3e-170 595
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 80 2e-169 592
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 79 5e-169 590
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 84 2e-168 588
WERAM-Caf-0210 ENSCAFP00000030461.2 Canis familiaris 95 7e-168 587
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 90 2e-167 585
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 77 7e-167 583
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 79 1e-166 582
WERAM-Orn-0028 ENSONIP00000003595.1 Oreochromis niloticus 78 8e-166 580
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 81 9e-166 580
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 79 1e-164 576
WERAM-Ova-0077 ENSOARP00000008071.1 Ovis aries 79 1e-151 533
WERAM-Myl-0140 ENSMLUP00000011265.2 Myotis lucifugus 93 3e-145 511
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 84 1e-133 473
WERAM-Tut-0169 ENSTTRP00000014364.1 Tursiops truncatus 81 1e-129 460
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 95 2e-127 452
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 93 8e-123 437
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 93 2e-122 436
WERAM-Eqc-0024 ENSECAP00000004143.1 Equus caballus 92 3e-97 352
WERAM-Tag-0067 ENSTGUP00000004826.1 Taeniopygia guttata 97 6e-65 245
WERAM-Mup-0145 ENSMPUP00000012594.1 Mustela putorius furo 96 7e-64 241
WERAM-Anc-0161 ENSACAP00000014909.3 Anolis carolinensis 34 6e-43 172
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 33 2e-33 140
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 46 4e-31 132
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 30 1e-24 111
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 28 5e-23 105
WERAM-Chh-0063 ENSCHOP00000006916.1 Choloepus hoffmanni 30 2e-22 103
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 30 5e-22 102
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 36 3e-19 93.2
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 28 6e-19 92.4
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 36 6e-19 92.4
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 35 9e-19 91.7
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 34 3e-18 90.5
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 37 1e-17 88.2
Created Date 25-Jun-2016