WERAM Information

Tag Content
WERAM ID WERAM-Cap-0072
Ensembl Protein ID ENSCPOP00000005323.2
Gene Name PRDM12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000005901.3 ENSCPOT00000005964.2 ENSCPOP00000005323.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 9.80e-48 161.1 87 203
Organism Cavia porcellus
Domain Profile
  HMT RIZ
               RIZ.txt   2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           ev +a+ssip+eglg+++k++i++g+++GPf+G++ ++e+v+ ++n++l+we+++++g+v+y++Das+e++++W++y+++Ar+++eqNL
  ENSCPOP00000005323.2  87 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNL 175
                           67899************************************************************************************ PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           +++qi+++ifYk+i++I+pd+ELLvwy+
  ENSCPOP00000005323.2 176 EVVQIGTSIFYKAIEMIPPDQELLVWYG 203
                           ***************************6 PP
Protein Sequence
(Fasta)		MMGSVLPAEA LVLKTGLKAP GLALAEVITS DILHSFLYGR WRNVLGEQLL EDKSHHASPK 60
TAFTAEVLAQ SFSGEVQKLS SLVLPVEVII AQSSIPGEGL GIFSKTWIKA GTEMGPFTGR 120
VIAPEHVDIC KNNNLMWEVF NEDGTVRYFI DASQEDHRSW MTYIKCARNE QEQNLEVVQI 180
GTSIFYKAIE MIPPDQELLV WYGNSHNTFL GIPGVPGLED EQKKNKHEDF HPGDAAAGTA 240
GRMRCVICHR GFNSRSNLRS HMRIHTLDKP FVCRFCNRRF SQSSTLRNHV RLHTGERPYK 300
CQVCQSAYSQ LGLRAHQKSA RHRAAQRRAA AGIGGPALPS SRPPGQEASY ESQSESHTSA 360
GHFPAWTM 368
Nucleotide Sequence
(Fasta)		ATGATGGGCT CCGTGCTCCC GGCTGAGGCC CTGGTCCTCA AGACAGGGCT GAAGGCTCCA 60
GGGCTGGCGC TGGCAGAGGT CATCACCTCC GATATCCTAC ATAGCTTCCT CTACGGCCGA 120
TGGCGCAACG TGCTGGGCGA GCAGCTCCTG GAAGACAAGA GCCACCACGC CAGCCCCAAG 180
ACGGCCTTCA CCGCCGAGGT CCTGGCACAG TCTTTCTCGG GTGAGGTGCA GAAGCTGTCC 240
AGCTTGGTGC TGCCGGTGGA GGTGATCATC GCCCAGAGCT CGATCCCTGG CGAGGGCCTC 300
GGCATCTTCT CCAAAACGTG GATCAAGGCG GGCACCGAGA TGGGCCCCTT CACCGGCCGC 360
GTCATTGCCC CTGAACACGT GGACATCTGC AAGAACAACA ACTTGATGTG GGAGGTGTTC 420
AATGAAGACG GTACGGTGCG GTACTTCATC GATGCCAGCC AGGAGGACCA CCGCAGCTGG 480
ATGACCTACA TCAAGTGTGC CCGGAATGAG CAGGAGCAGA ACCTGGAGGT GGTCCAGATC 540
GGCACCAGCA TCTTCTACAA GGCCATCGAG ATGATCCCCC CCGACCAGGA GCTGCTGGTG 600
TGGTACGGGA ACTCCCACAA CACCTTCCTG GGCATCCCTG GGGTGCCGGG GCTGGAGGAC 660
GAGCAGAAGA AGAACAAACA CGAGGACTTC CACCCCGGGG ATGCGGCTGC GGGCACGGCG 720
GGCCGCATGC GCTGCGTCAT CTGCCATCGC GGCTTCAACT CGCGCAGCAA CCTGCGCTCG 780
CACATGCGCA TCCACACGCT GGACAAGCCC TTCGTGTGCC GCTTCTGCAA CCGCCGCTTC 840
AGCCAGTCGT CCACGCTGCG CAACCACGTG CGCCTGCACA CGGGCGAGCG CCCCTACAAG 900
TGCCAGGTGT GCCAGAGCGC CTACTCGCAG CTGGGCCTGC GCGCCCACCA GAAGAGCGCG 960
CGCCACCGGG CCGCCCAGCG CCGCGCTGCA GCCGGCATTG GCGGCCCAGC TCTCCCCTCT 1020
TCCAGACCTC CCGGCCAGGA GGCCTCATAC GAGTCGCAGA GCGAGAGTCA CACCAGTGCT 1080
GGGCATTTTC CAGCCTGGAC TATG 1105
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ict-0060 ENSSTOP00000005349.2 Ictidomys tridecemlineatus 99 0.0 650
WERAM-Ran-0059 ENSRNOP00000012234.3 Rattus norvegicus 98 0.0 649
WERAM-Mum-0228 ENSMUSP00000109098.2 Mus musculus 98 0.0 649
WERAM-Otg-0085 ENSOGAP00000006760.2 Otolemur garnettii 98 0.0 647
WERAM-Ptv-0010 ENSPVAP00000001423.1 Pteropus vampyrus 98 0.0 646
WERAM-Poa-0186 ENSPPYP00000022077.1 Pongo abelii 97 0.0 644
WERAM-Pat-0178 ENSPTRP00000036745.1 Pan troglodytes 97 0.0 644
WERAM-Hos-0119 ENSP00000253008.2 Homo sapiens 97 0.0 644
WERAM-Paa-0213 ENSPANP00000018834.1 Papio anubis 97 0.0 643
WERAM-Chs-0179 ENSCSAP00000010875.1 Chlorocebus sabaeus 97 0.0 643
WERAM-Sus-0037 ENSSSCP00000006110.2 Sus scrofa 97 0.0 643
WERAM-Bot-0192 ENSBTAP00000032579.2 Bos taurus 97 0.0 642
WERAM-Loa-0078 ENSLAFP00000005864.3 Loxodonta africana 96 0.0 640
WERAM-Caj-0218 ENSCJAP00000038158.1 Callithrix jacchus 97 0.0 639
WERAM-Gog-0123 ENSGGOP00000010306.2 Gorilla gorilla 97 0.0 639
WERAM-Ocp-0088 ENSOPRP00000007941.1 Ochotona princeps 97 0.0 638
WERAM-Dan-0173 ENSDNOP00000030867.1 Dasypus novemcinctus 97 0.0 637
WERAM-Mod-0098 ENSMODP00000015165.2 Monodelphis domestica 95 3e-180 628
WERAM-Sah-0180 ENSSHAP00000018820.1 Sarcophilus harrisii 95 2e-178 622
WERAM-Pes-0052 ENSPSIP00000007299.1 Pelodiscus sinensis 93 1e-176 616
WERAM-Fia-0018 ENSFALP00000001507.1 Ficedula albicollis 93 6e-174 607
WERAM-Meg-0059 ENSMGAP00000005346.1 Meleagris gallopavo 93 8e-174 607
WERAM-Gaga-0041 ENSGALP00000006182.3 Gallus gallus 93 9e-174 606
WERAM-Aim-0182 ENSAMEP00000017138.1 Ailuropoda melanoleuca 92 3e-173 605
WERAM-Lac-0168 ENSLACP00000019977.1 Latimeria chalumnae 90 6e-172 600
WERAM-Dar-0018 ENSDARP00000015394.5 Danio rerio 87 1e-163 573
WERAM-Orc-0078 ENSOCUP00000007120.2 Oryctolagus cuniculus 94 1e-163 573
WERAM-Asm-0075 ENSAMXP00000007875.1 Astyanax mexicanus 88 2e-163 572
WERAM-Leo-0047 ENSLOCP00000006545.1 Lepisosteus oculatus 83 7e-161 563
WERAM-Orla-0069 ENSORLP00000008922.1 Oryzias latipes 85 4e-159 558
WERAM-Xim-0064 ENSXMAP00000005547.1 Xiphophorus maculatus 82 9e-159 556
WERAM-Gaa-0177 ENSGACP00000022065.1 Gasterosteus aculeatus 83 1e-158 556
WERAM-Pof-0242 ENSPFOP00000019968.2 Poecilia formosa 82 2e-158 556
WERAM-Caf-0210 ENSCAFP00000030461.2 Canis familiaris 97 2e-158 555
WERAM-Tar-0225 ENSTRUP00000047797.1 Takifugu rubripes 83 6e-157 550
WERAM-Ten-0104 ENSTNIP00000011876.1 Tetraodon nigroviridis 84 3e-156 548
WERAM-Gam-0121 ENSGMOP00000012620.1 Gadus morhua 82 8e-156 546
WERAM-Orn-0028 ENSONIP00000003595.1 Oreochromis niloticus 80 5e-155 544
WERAM-Mae-0037 ENSMEUP00000003491.1 Macropus eugenii 84 8e-152 533
WERAM-Anp-0104 ENSAPLP00000012181.1 Anas platyrhynchos 81 4e-146 514
WERAM-Ova-0077 ENSOARP00000008071.1 Ovis aries 81 2e-145 512
WERAM-Tut-0169 ENSTTRP00000014364.1 Tursiops truncatus 84 3e-135 478
WERAM-Myl-0140 ENSMLUP00000011265.2 Myotis lucifugus 95 3e-134 475
WERAM-Nol-0140 ENSNLEP00000015220.1 Nomascus leucogenys 98 4e-131 465
WERAM-Ect-0066 ENSETEP00000007192.1 Echinops telfairi 97 7e-128 454
WERAM-Fec-0217 ENSFCAP00000016661.1 Felis catus 90 9e-125 444
WERAM-Xet-0008 ENSXETP00000002850.3 Xenopus tropicalis 91 6e-122 434
WERAM-Eqc-0024 ENSECAP00000004143.1 Equus caballus 95 3e-100 362
WERAM-Mup-0145 ENSMPUP00000012594.1 Mustela putorius furo 98 9e-65 244
WERAM-Tag-0067 ENSTGUP00000004826.1 Taeniopygia guttata 95 8e-63 238
WERAM-Anc-0161 ENSACAP00000014909.3 Anolis carolinensis 36 3e-41 166
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 33 3e-31 133
WERAM-Soa-0070 ENSSARP00000006897.1 Sorex araneus 45 1e-30 131
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 30 2e-22 103
WERAM-Ora-0122 ENSOANP00000023793.3 Ornithorhynchus anatinus 30 3e-22 103
WERAM-Chh-0063 ENSCHOP00000006916.1 Choloepus hoffmanni 29 8e-22 102
WERAM-Prc-0123 ENSPCAP00000010913.1 Procavia capensis 32 9e-20 95.1
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 30 1e-18 91.3
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 35 7e-18 89.0
WERAM-Tub-0069 ENSTBEP00000008639.1 Tupaia belangeri 26 8e-18 88.6
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 35 1e-17 88.2
WERAM-Pem-0105 ENSPMAP00000010842.1 Petromyzon marinus 32 2e-17 87.4
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 36 1e-16 84.3
Created Date 25-Jun-2016