WERAM Information

Tag Content
WERAM ID WERAM-Brr-0022
Ensembl Protein ID Bra005311.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra005311 Bra005311.1 Bra005311.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.10e-07 31 40 77
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt 35 ikerleegnYsspeefvkDvrlifnNakaynenkssvq 72
                   ++ +le+g  +sp +f+ Dvrl f+Na ayn+++++v+
  Bra005311.1-P 40 VRTNLEKGFHRSPVDFASDVRLTFTNALAYNSKGQDVY 77
                   899********************************997 PP
Protein Sequence
(Fasta)		MMTLATHSIS FFVPNFMRSD LGEADEAQVV VGVQHARRRV RTNLEKGFHR SPVDFASDVR 60
LTFTNALAYN SKGQDVYKMA EKLLSQFDPL PTLPLPRAHL LLHRHLPSRW LAKWKHLLRT 120
SQPVNQVEAS PLEVGEAPKG RKGKLPKPKA KDPNKREMTM EEKAKLGVNL QELPPEKLGQ 180
LIQILKKRTT NLSQDGDDIA LDIAFCNLHS INQSMIMKSV QISSKSPVAL YRI 233
Nucleotide Sequence
(Fasta)		ATGATGACTC TTGCTACTCA TTCAATTTCG TTCTTCGTTC CTAACTTCAT GCGGTCAGAT 60
CTTGGCGAAG CTGATGAAGC ACAAGTGGTC GTGGGTGTTC AACATGCCCG TCGACGTGTT 120
AGGACGAATC TCGAAAAGGG GTTTCATAGA TCCCCCGTTG ATTTTGCTTC AGATGTGAGG 180
TTGACTTTCA CGAACGCGTT GGCGTATAAT TCGAAGGGGC AAGACGTTTA TAAAATGGCT 240
GAGAAGCTTC TGAGTCAGTT CGATCCGTTA CCTACATTGC CTCTGCCACG TGCCCATCTC 300
CTCCTCCATC GCCACCTCCC CAGCCGGTGG TTAGCAAAGT GGAAACACCT CCTCCGCACT 360
TCCCAACCGG TTAACCAAGT GGAAGCATCG CCTCTTGAGG TGGGAGAAGC GCCTAAGGGG 420
AGGAAAGGGA AGTTACCGAA GCCTAAGGCT AAGGATCCAA ACAAGAGAGA GATGACGATG 480
GAAGAGAAGG CGAAGCTCGG TGTGAATCTA CAGGAGCTGC CTCCGGAGAA GCTTGGACAG 540
TTGATTCAGA TTCTTAAGAA GAGAACCACG AATCTGTCTC AAGATGGGGA TGATATTGCG 600
TTGGATATCG CGTTCTGCAA CCTCCATTCA ATAAACCAAT CGATGATCAT GAAATCGGTT 660
CAAATCTCAA GCAAGTCTCC AGTGGCCCTA TATCGCATTT GA 703
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0106 POPTR_0009s08350.1 Populus trichocarpa 32 3e-23 105
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 43 5e-23 105
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 44 6e-23 104
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 44 1e-22 103
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 44 2e-22 102
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 44 2e-22 102
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 44 2e-22 102
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 44 3e-22 102
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 44 3e-22 102
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 44 3e-22 102
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 44 3e-22 102
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 43 3e-22 102
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 42 4e-22 102
WERAM-Zem-0093 GRMZM2G167718_P01 Zea mays 40 1e-21 100
WERAM-Sei-0009 Si001167m Setaria italica 41 2e-21 99.8
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 41 3e-21 99.4
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 40 3e-21 99.4
WERAM-Aet-0058 EMT09500 Aegilops tauschii 40 2e-20 96.3
WERAM-Art-0121 AT5G10550.1 Arabidopsis thaliana 85 3e-20 95.9
WERAM-Amt-0025 ERN13953 Amborella trichopoda 40 6e-20 95.1
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 39 1e-19 93.6
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 38 8e-19 90.9
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 40 1e-18 90.5
WERAM-Tra-0278 Traes_6DS_6D2C07E0F.2 Triticum aestivum 38 3e-17 85.9
WERAM-Bro-0159 Bo8g104630.1 Brassica oleracea 32 4e-17 85.5
WERAM-Arl-0151 scaffold_803299.1 Arabidopsis lyrata 73 2e-16 83.6
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 38 3e-16 82.4
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 59 2e-13 72.8
WERAM-Thc-0024 EOX98601 Theobroma cacao 53 3e-12 69.3
WERAM-Met-0110 AES90546 Medicago truncatula 53 5e-12 68.6
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 57 6e-11 65.1
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 55 3e-10 62.8
WERAM-Prp-0054 EMJ01899 Prunus persica 55 7e-10 61.2
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 51 3e-09 59.7
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 54 1e-08 57.4
WERAM-Kll-0001 CAH02717 Kluyveromyces lactis 37 2e-06 49.7
Created Date 25-Jun-2016