WERAM Information

Tag Content
WERAM ID WERAM-Arl-0130
Ensembl Protein ID scaffold_500181.1
Gene Name AL6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_500181.1 scaffold_500181.1 scaffold_500181.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 8.70e-13 48.9 200 249
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
            PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        +C +Cg+++  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  scaffold_500181.1 200 VCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCSN 249
                        8****999999999*******************555554479******86 PP
Protein Sequence
(Fasta)		MEGITHPIPR TVEEVFSDFR GRRAGLIKAL TNDMVKFYQT CDPEKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS WLLSVAFYFG ARFGFGKNER 120
KRLFQMINEL PTIFEVVSGS NAKQSKDLSV NNNNSKSKPS GIKSRQSESL TKVAKMSSPP 180
PKEEDDESED EEEDDEQGAV CGACGDNYGT DEFWICCDAC EKWFHGKCVK ITPAKAEHIK 240
HYKCPSCSNK RARP 254
Nucleotide Sequence
(Fasta)		GGTGGCATCG TCTGTGAGAA ATGGAAGGAA TCACTCATCC AATACCTCGT ACTGTTGAAG 60
AGGTCTTTAG CGACTTCAGA GGTCGACGAG CTGGTCTTAT TAAAGCTCTC ACAAATGATA 120
TGGTGAAGTT TTACCAAACG TGTGATCCTG AGAAGGAGAA TTTGTGTCTC TATGGACTTC 180
CAAATGAGAC ATGGGAGGTT AATCTACCCG TTGAGGAAGT TCCTCCTGAG CTTCCTGAAC 240
CAGCTTTGGG CATTAACTTC GCAAGAGACG GAATGCAAGA AAAGGACTGG GTATCTTTGG 300
TCGCGGTTCA CAGTGATTCA TGGCTGCTTT CTGTTGCCTT TTACTTTGGT GCACGTTTCG 360
GATTTGGTAA GAACGAGAGG AAGAGACTGT TCCAGATGAT TAATGAGCTG CCGACCATTT 420
TCGAAGTGGT GAGTGGCAGC AATGCAAAGC AGTCCAAGGA TCTATCTGTT AACAACAACA 480
ATAGCAAAAG CAAACCTAGT GGCATCAAGT CTCGCCAATC CGAATCTCTC ACAAAGGTTG 540
CAAAGATGTC ATCTCCACCG CCAAAAGAAG AAGATGATGA GAGTGAAGAC GAGGAAGAGG 600
ACGATGAACA AGGTGCGGTT TGTGGCGCTT GTGGAGACAA CTACGGTACA GATGAGTTCT 660
GGATTTGCTG CGACGCGTGT GAGAAATGGT TCCATGGAAA ATGTGTGAAG ATAACACCTG 720
CAAAAGCAGA ACACATCAAG CATTACAAAT GCCCAAGTTG CAGTAACAAG AGAGCCAGAC 780
CTTGAAGTTT AATAAAAGGT AAACG 806
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 94 4e-111 397
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 85 2e-100 362
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 84 5e-100 360
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 83 1e-97 353
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 80 3e-96 348
WERAM-Thc-0075 EOY26404 Theobroma cacao 79 1e-94 343
WERAM-Prp-0081 EMJ24886 Prunus persica 80 2e-94 342
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 80 4e-94 341
WERAM-Met-0117 KEH32736 Medicago truncatula 79 5e-92 334
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 76 3e-88 322
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 77 3e-87 318
WERAM-Amt-0088 ERM99796 Amborella trichopoda 74 9e-86 313
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 73 3e-85 311
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 71 2e-82 302
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 71 3e-82 301
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 71 3e-82 301
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 71 3e-82 301
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 71 3e-82 301
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 71 3e-82 301
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 71 3e-82 301
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 71 3e-82 301
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 71 3e-82 301
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 71 5e-82 301
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 69 6e-82 301
WERAM-Zem-0090 GRMZM2G158918_P01 Zea mays 67 1e-81 300
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 71 2e-81 299
WERAM-Sei-0086 Si023009m Setaria italica 69 8e-81 297
WERAM-Brd-0098 BRADI4G21040.1 Brachypodium distachyon 71 1e-80 296
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 66 9e-79 290
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 1e-78 290
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 70 2e-74 276
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 67 5e-74 274
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 65 1e-72 270
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 63 8e-70 260
Created Date 25-Jun-2016