WERAM Information

Tag Content
WERAM ID WERAM-Arl-0050
Ensembl Protein ID fgenesh2_kg.112__2__AT5G65630.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.112__2__AT5G65630.1 fgenesh2_kg.112__2__AT5G65630.1 fgenesh2_kg.112__2__AT5G65630.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 6.00e-74 248.9 616 829
Organism Arabidopsis lyrata
Domain Profile
  HDM JHDM2
                         JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.vgilkkk...waeedlkell 77 
                                       r g lN+a+klp+ +++pdlgPk+y AyG + e +r++++t+lh+d+sdavnil++ ++  +++    a edlk+  
  fgenesh2_kg.1__1301__AT1G11950.1 616 RSGILNIATKLPEGLLKPDLGPKTYIAYGTSDELGRGDSVTKLHCDMSDAVNILMHtAEVTLSEeqmSAIEDLKQKH 692
                                       7899****************************************************633444441133445555555 PP
                         JHDM2.txt  78 ksieeeeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrk 150
                                       k+ +e+el+e     +   +e+ galW+if+++d++k++e+l+k++ke+++    +v ++++pihdqs++l+ ++++
  fgenesh2_kg.1__1301__AT1G11950.1 693 KQQNEKELQEQID-EIVIYDETGGALWDIFRREDVPKLEEYLRKHCKEFRHtfcsPVTKVYHPIHDQSCFLTVEHKR 768
                                       5555556655444.444556669***************************9999889999***************** PP
                         JHDM2.txt 151 rLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                                       +L+ e+G+e+wt+vQklg+av+ipag+pHqv+nlksc kva dFvsPEn+ ec+rlt e+r
  fgenesh2_kg.1__1301__AT1G11950.1 769 KLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFR 829
                                       ***********************************************************98 PP
Protein Sequence
(Fasta)		MAPAVLGTLN EPSYQEQCGA VFMRKFTNQS VTENTNNLPL FNPNPNPNFD RSNSSKQFDD 60
SSEFGSYATF NIAGYTSNQL RELKKRFTSE LEQIRILRER IESGTFETQQ AYTIPEVPAV 120
RSAPLNSFAG EKNDLGPKKK KQKKNVSGLK RSNQFTDSDP ESEKLLAGML NTCGQILVKL 180
MKHKWAWVFN TPVDVVGLGL HDYHQVVKKP MDLGTVKLNL DKGFYVSPID FATDVRLTFN 240
NAMTYNPKGQ DVYFMADKLL DHFDGMFNPA FKKFEAQQLK LTGSSSRLEP EVKQRHWNQN 300
SPMVANPRKG TEQISIAKKL DSVKPPLPAL PPQLVEPSRV QSPSPPPPPP PPVVEPQLPQ 360
LVIEVEAPPD VSDVTKGRKG KLPKPKAKDP NKRLMTIEQK SKLGMNLQDL PPEKLGQLVQ 420
ILRKRNGHLA QDAKSSGKGL SGTCQLPPRN MTSVAEMGSA EKRTRRGDAG EEDVDIGEDI 480
PIEDYPSVEI ERDGTAVAGS GSSSSGSSSS SGGSSSSSDS GSGGSSSGSD SDADSVQSPF 540
VEAKEAQ 547
Nucleotide Sequence
(Fasta)		TCACCATCGA CCATCTCCAA AAATCGCCGG AATTTTCGCC GGTGATGTAA TTTTCCCGCC 60
CTTTTTTGGA GGTAAAAAAG TTTTTTTTTT CTCAGAAGCT CGAGAAGAGT GAAAACCCCA 120
GAAATGACCT TGCGATTCGT ATGGCTCCGG CTGTTTTGGG TACCTTAAAC GAACCGTCGT 180
ACCAGGAACA ATGCGGCGCC GTTTTTATGA GGAAATTTAC AAACCAATCC GTCACCGAAA 240
ACACCAATAA CCTTCCTCTC TTCAACCCTA ACCCTAACCC TAATTTCGAC AGGAGCAATT 300
CGAGCAAACA GTTTGATGAT TCGTCGGAAT TTGGAAGCTA CGCTACTTTT AACATCGCTG 360
GGTACACCTC AAATCAGCTC AGGGAGCTGA AGAAGCGTTT CACCTCTGAG CTCGAGCAGA 420
TTCGGATCCT GAGAGAACGG ATCGAGTCAG GGACGTTCGA GACTCAGCAA GCTTATACTA 480
TCCCGGAGGT ACCCGCCGTT CGATCAGCTC CGTTGAATAG TTTCGCCGGT GAAAAGAATG 540
ACCTTGGACC GAAGAAGAAG AAGCAGAAGA AAAATGTGTC AGGTCTCAAG CGAAGCAATC 600
AATTTACTGA TTCGGATCCG GAGTCGGAGA AATTATTGGC TGGTATGTTG AATACTTGTG 660
GTCAAATCTT GGTGAAGCTG ATGAAGCATA AATGGGCGTG GGTGTTCAAC ACTCCTGTTG 720
ATGTGGTTGG TTTAGGGCTT CATGATTATC ATCAGGTTGT GAAGAAACCT ATGGATCTGG 780
GTACGGTTAA GTTGAATCTT GATAAAGGGT TTTACGTTTC GCCGATTGAT TTTGCTACTG 840
ATGTCAGATT GACATTCAAC AATGCAATGA CGTATAATCC AAAGGGTCAA GATGTGTATT 900
TTATGGCTGA TAAGCTTTTG GATCATTTCG ATGGAATGTT CAATCCTGCT TTTAAGAAGT 960
TTGAGGCTCA GCAGCTTAAA CTCACTGGTT CTTCATCTCG TCTTGAACCT GAGGTCAAGC 1020
AAAGACATTG GAATCAGAAT TCGCCAATGG TGGCAAATCC TAGGAAAGGA ACCGAACAAA 1080
TATCTATCGC GAAGAAGCTT GATTCAGTGA AGCCGCCACT ACCTGCATTG CCTCCTCAAT 1140
TAGTCGAGCC GTCGCGTGTT CAATCTCCTT CTCCACCACC TCCTCCTCCT CCTCCGGTGG 1200
TTGAGCCTCA ACTTCCGCAG CTGGTTATTG AAGTAGAAGC ACCTCCTGAT GTGAGTGACG 1260
TGACAAAAGG AAGGAAGGGG AAGTTGCCGA AGCCTAAGGC TAAGGATCCA AATAAGAGGT 1320
TGATGACAAT CGAGCAGAAG TCAAAGCTTG GTATGAATCT ACAAGACTTA CCTCCTGAGA 1380
AGCTTGGACA GTTGGTTCAG ATTCTCAGGA AGAGAAACGG TCATTTAGCT CAAGATGCAA 1440
AATCAAGCGG CAAGGGTTTA TCAGGAACGT GTCAACTCCC ACCTAGGAAC ATGACTTCGG 1500
TAGCAGAAAT GGGTAGTGCG GAGAAGAGAA CAAGGAGAGG AGATGCAGGG GAAGAGGATG 1560
TAGACATTGG AGAAGACATA CCAATCGAAG ATTACCCATC TGTAGAGATC GAAAGAGATG 1620
GTACTGCAGT TGCAGGTAGT GGGTCTAGTT CTTCAGGCAG TTCCAGTTCT AGTGGTGGTA 1680
GTTCCTCGTC TAGTGATTCA GGGTCAGGTG GGAGTTCATC AGGTAGTGAT TCTGATGCAG 1740
ATAGTGTTCA ATCGCCATTT GTGGAAGCAA AAGAAGCTCA ATGATAGAAT CATTTGGTGA 1800
TTTAGCCGTT GATTCTGTCC TGAAGCACTA GGAACTGAAG GAAAATGATT TGTTCTTTCT 1860
TTAGATGAAA AACTTAGGAA GCAGTTGTAG TTAGAGAGGA AAATGTACTG GGTAGATAGA 1920
GAGAGAAGAA GAGTTCGTTA TTTAATACCT TTTAGATTTA GGACTGTTTA GTGTATTTGT 1980
GAGATGCTGA ACAGAGGGTG AGAGTGAGTG CGCAATGTAA GAAGAAGAAG AAGAAAAGAG 2040
TCTTTTTCGG TTCTATTGAC TATTTTTTTT CCTTTGTGGT TAGTGTTAAA AAGTCTGGTT 2100
GTGGTAGGAA AAATGGTGAT AGAAGAGAAG ACAGAAATCA ATGCAATGTA GTAGTTGAGA 2160
GATGTAAATG GTTGCCATAT TAAAAAAAAA A 2192
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0152 AT5G65630.1 Arabidopsis thaliana 82 0.0 785
WERAM-Brr-0122 Bra024402.1-P Brassica rapa 68 0.0 632
WERAM-Viv-0014 VIT_03s0097g00570.t01 Vitis vinifera 35 1e-75 281
WERAM-Glm-0189 GLYMA15G06570.1 Glycine max 37 1e-75 281
WERAM-Thc-0024 EOX98601 Theobroma cacao 35 5e-71 266
WERAM-Amt-0058 ERN18099 Amborella trichopoda 35 5e-70 262
WERAM-Met-0110 AES90546 Medicago truncatula 35 1e-68 258
WERAM-Pot-0106 POPTR_0009s08350.1 Populus trichocarpa 34 3e-67 253
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 41 3e-62 237
WERAM-Sot-0009 PGSC0003DMT400008039 Solanum tuberosum 41 1e-61 234
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 40 2e-55 214
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 36 2e-51 201
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 36 2e-51 200
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 38 2e-49 194
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 44 3e-48 190
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 42 3e-48 190
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 41 5e-48 189
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 43 6e-48 189
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 43 2e-47 187
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 43 2e-47 187
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 43 1e-46 185
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 43 1e-46 185
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 43 1e-46 184
WERAM-Prp-0054 EMJ01899 Prunus persica 45 8e-46 182
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 38 9e-46 182
WERAM-Sei-0009 Si001167m Setaria italica 35 3e-44 177
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 43 6e-42 169
WERAM-Aet-0058 EMT09500 Aegilops tauschii 41 1e-41 168
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 43 4e-41 166
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 41 1e-39 162
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 35 1e-39 161
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 41 3e-39 160
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 46 2e-36 150
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 54 6e-33 139
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 54 9e-33 139
Created Date 25-Jun-2016