WERAM Information

Tag Content
WERAM ID WERAM-Sei-0039
Ensembl Protein ID Si010912m
Gene Name SETIT_010912mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si010912m.g Si010912m Si010912m
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.80e-12 47.6 196 246
Organism Setaria italica
Domain Profile
  Me_Reader PHD
    PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                t+C +Cg  +  +++++ Cd C++w+H+kCvk++  ++++ k++ CpsC +
  Si010912m 196 TLCGTCGGIYSADEFWIGCDMCEKWYHGKCVKITPAKAESIKQYKCPSCSK 246
                78****999999999*******************555554489******86 PP
Protein Sequence
(Fasta)		MDASYRRAGA GGGSAPRTVE DIFKDYRARR SAILRALTHE VEDFYAQCDP EKENLCLYGY 60
ANEVWEVALP AEEVPTELPE PALGINFARD GMNRRDWLAL VAVHSDSWLV SVAFYYAARL 120
NRNERKRLFS MMNDLPTVFE VVSGGVKQSR ERDRSASDNS GRNKLSVKQT SEPRIENNTR 180
EPDEGYDEDD GDHSETLCGT CGGIYSADEF WIGCDMCEKW YHGKCVKITP AKAESIKQYK 240
CPSCSKRPRP M 251
Nucleotide Sequence
(Fasta)		GGACCCACAC GAAAAACCGC AAGATCTTAC ACGTCTCCCC CTTTTACCCC GCATCACTCG 60
TGTCCTCGTG TACTACTCGT CGCTCCGCTC CCGACCGCAT CGCGATCAGT CACCTCCTCT 120
CCGCCTCGCC GGAGATCAGA CGAGGCGCCG ACCGGAGATG GACGCATCCT ACCGCCGCGC 180
CGGCGCCGGG GGCGGCTCCG CGCCGCGCAC CGTCGAGGAC ATCTTCAAGG ACTACCGCGC 240
CCGCCGCTCC GCCATCCTCC GCGCCCTCAC CCACGAAGTG GAGGACTTCT ACGCGCAGTG 300
CGATCCAGAG AAGGAGAACC TGTGCCTGTA CGGGTACGCG AACGAGGTGT GGGAGGTGGC 360
GCTGCCGGCG GAGGAGGTGC CCACGGAGCT GCCAGAGCCG GCGCTCGGGA TCAACTTCGC 420
TCGCGACGGG ATGAACCGCC GCGACTGGCT CGCGCTCGTC GCCGTCCACT CCGACTCGTG 480
GCTCGTCTCC GTCGCATTCT ACTACGCCGC GCGGCTCAAC CGCAACGAAC GGAAGCGTTT 540
GTTTAGCATG ATGAACGATC TGCCGACTGT TTTTGAAGTT GTCTCTGGTG GGGTGAAACA 600
ATCCAGGGAG AGGGACAGAT CCGCTTCCGA CAACAGTGGT AGAAATAAAC TGTCAGTGAA 660
GCAAACAAGC GAGCCACGCA TAGAAAATAA CACCAGGGAG CCCGACGAGG GCTATGACGA 720
AGACGACGGC GACCACAGCG AAACCCTATG CGGGACTTGC GGCGGGATAT ACAGCGCGGA 780
CGAGTTCTGG ATTGGGTGCG ACATGTGCGA GAAGTGGTAC CACGGCAAGT GCGTGAAGAT 840
CACCCCCGCG AAGGCAGAGA GCATAAAGCA GTACAAGTGC CCAAGCTGCT CAAAGAGACC 900
TAGGCCGATG TAGCACCGTC GTCCTCCGCG CTAGAGGAGG AGGGGCTGGG CGGGAGCGCC 960
CGCCATAGAT GGAAACCTGA ACAAGCAGGA GGGTCCGGAG TTACTCCTTG TGCAAGAGTC 1020
AATACCGGTC TTGCGACGTT TACTGTATCT TTTCGATTTA GCTTACGTGT GACGACGATG 1080
GTGATGCTAA TGTGATCACA CATATTGATT ATAGTCTTTC TTGTGGTTTC TCCATGCCCT 1140
GGAAAGAGTT AACGGTAGTC TGTATGTTGC CGGAGAAGAA AATAGGGGCA GTAAGGAAGC 1200
CTTTGTAATG TGCCGAAAGT GAATTGACCA CCTTATGCGA CAATAATCCG AGAGGTTTAT 1260
GTTCATATTT ACTCA 1276
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0083 GRMZM2G148810_P01 Zea mays 91 2e-123 438
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 91 1e-122 436
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 88 9e-115 410
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 87 1e-114 409
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 88 4e-114 407
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 87 5e-114 407
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 86 4e-112 400
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 86 8e-111 396
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 79 1e-110 396
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 79 1e-110 396
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 85 3e-110 395
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 84 2e-109 392
WERAM-Aet-0099 EMT23706 Aegilops tauschii 77 6e-105 377
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 73 1e-90 330
WERAM-Sot-0033 PGSC0003DMT400028638 Solanum tuberosum 66 4e-88 321
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 66 8e-88 320
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 69 7e-86 313
WERAM-Prp-0085 EMJ19499 Prunus persica 68 7e-85 310
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 66 7e-85 310
WERAM-Thc-0059 EOY07191 Theobroma cacao 71 8e-85 310
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 70 2e-84 309
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 70 2e-84 308
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 70 2e-84 308
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 70 2e-84 308
WERAM-Amt-0010 ERN05231 Amborella trichopoda 67 4e-83 305
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 57 5e-82 301
WERAM-Viv-0083 VIT_13s0067g01000.t01 Vitis vinifera 72 5e-82 301
WERAM-Met-0150 KEH23172 Medicago truncatula 67 3e-81 298
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 65 2e-80 295
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 66 3e-79 291
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 66 7e-79 290
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 63 8e-76 280
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 63 2e-75 279
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 63 3e-75 278
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 64 8e-66 247
Created Date 25-Jun-2016