Tag |
Content |
WERAM ID |
WERAM-Sei-0028 |
Ensembl Protein ID |
Si006784m |
Gene Name |
SETIT_006784mg |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
3.20e-27 |
96.9 |
40 |
326 |
|
Organism |
Setaria italica |
Domain Profile |
HDAC Class-I
class-1.txt 5 yaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv.epenaeelskelkkfnvgedcPvfdg.lfe 100 y d++ + ++ hp ++ + ++ g +k ++v+p +a +e+ll +h+e+y++ lk + ++ + e + ++ + v ++ l+ Si006784m 40 YSPAYDISFLGLEKLHPFDSAKWGRICRYLTREGHLEKKQVVEPLEACKEDLLVVHTEAYLNSLKCSfRVASIVE----VPPVSLVPNWIVQKKlLYP 133 555666666777888999999998877777777888888***********************9985413344334....4455555555555441788 PP class-1.txt 101 ycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee 196 + + ++G+ l+a L++ ain GG+hh +e Gfc Di l i+ + + + +r+l id+d h G+g e+ f + rv + + y+ + Si006784m 134 FRKQVGGSILSAKLALER---GWAINVGGGFHHCSAEEGGGFCAYADISLCIQfAFVRlNISRLLIIDLDAHQGNGHEKDFANDGRVYILDM--YNAG 226 888877777777666654...579****************************8344555999*************************98766..6665 PP class-1.txt 197 ffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh....aecvkfvksfnlpllv 290 +P +y v l g + ++y +++ + ++ ++f+P+ +v + G+D l gD+lg ++s +g ++ +f k+ n+pll+ Si006784m 227 IYPF-------DFTAKQYIDQKVELASGTKTDEYLELLDKALEVCKSRFQPQLIVYNAGTDILDGDPLGRLKISPEGVitrdEKVFRFAKDQNIPLLM 317 5664.......344456777889***************************************************999733324699************ PP class-1.txt 291 lGGGGYtlr 299 l GGY + Si006784m 318 LTSGGYMKS 326 ******764 PP
|
Protein Sequence (Fasta) | MASSSASPAP APAGESLRQK RILSSKLYLE VPSSKAPVVY SPAYDISFLG LEKLHPFDSA 60 KWGRICRYLT REGHLEKKQV VEPLEACKED LLVVHTEAYL NSLKCSFRVA SIVEVPPVSL 120 VPNWIVQKKL LYPFRKQVGG SILSAKLALE RGWAINVGGG FHHCSAEEGG GFCAYADISL 180 CIQFAFVRLN ISRLLIIDLD AHQGNGHEKD FANDGRVYIL DMYNAGIYPF DFTAKQYIDQ 240 KVELASGTKT DEYLELLDKA LEVCKSRFQP QLIVYNAGTD ILDGDPLGRL KISPEGVITR 300 DEKVFRFAKD QNIPLLMLTS GGYMKSSARV IADSIINLAN KNLIELGSQL G 351Protein Fasta Sequence
>Si006784m|Class-I|Setaria italica MASSSASPAPAPAGESLRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFDSAKWGRICRYLTREGHLEKKQVVEPLEACKEDLLVVHTEAYLNSLKCSFRVASIVEVPPVSLVPNWIVQKKLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAFVRLNISRLLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYPFDFTAKQYIDQKVELASGTKTDEYLELLDKALEVCKSRFQPQLIVYNAGTDILDGDPLGRLKISPEGVITRDEKVFRFAKDQNIPLLMLTSGGYMKSSARVIADSIINLANKNLIELGSQLG
|
Nucleotide Sequence (Fasta) | ATGGCCTCCT CCTCCGCCTC GCCGGCGCCG GCGCCGGCCG GGGAGTCCCT ACGGCAGAAA 60 CGCATCCTCT CCAGCAAGCT CTACCTCGAA GTCCCCTCGT CCAAGGCACC GGTGGTCTAC 120 TCGCCGGCCT ACGACATCTC CTTCCTCGGC CTCGAGAAGC TGCACCCGTT TGATTCCGCC 180 AAATGGGGGC GCATCTGCAG GTACCTCACC AGGGAAGGGC ACCTGGAGAA GAAACAGGTC 240 GTGGAGCCAT TGGAAGCCTG CAAGGAGGAT TTGCTAGTGG TTCACACGGA GGCGTATCTT 300 AACAGCCTCA AATGCAGCTT CAGAGTCGCC TCCATTGTGG AGGTCCCTCC TGTGTCGCTT 360 GTCCCTAATT GGATCGTGCA GAAAAAGCTA CTATACCCAT TCCGGAAGCA GGTTGGTGGG 420 TCCATTTTGT CAGCGAAACT TGCACTCGAG AGAGGATGGG CTATTAATGT TGGTGGAGGA 480 TTTCACCATT GTTCGGCAGA GGAAGGAGGT GGATTTTGTG CGTACGCTGA CATCTCTCTG 540 TGCATCCAGT TTGCTTTTGT CCGTCTAAAT ATTTCACGTT TATTGATCAT AGATCTGGAT 600 GCTCACCAAG GAAATGGACA TGAAAAAGAT TTTGCTAATG ATGGAAGGGT TTACATTTTG 660 GACATGTACA ATGCTGGAAT TTATCCCTTT GATTTCACTG CTAAGCAATA CATCGATCAA 720 AAAGTTGAAT TAGCTAGCGG GACAAAAACA GATGAATACT TGGAGCTACT TGATAAGGCT 780 CTCGAGGTCT GCAAAAGTAG GTTTCAACCC CAGTTGATTG TTTACAATGC TGGAACAGAC 840 ATCCTTGATG GTGATCCATT GGGCAGATTG AAGATAAGTC CTGAGGGTGT AATTACCAGA 900 GATGAGAAGG TGTTTAGATT TGCGAAAGAT CAAAACATTC CACTGCTCAT GCTGACGTCA 960 GGAGGCTACA TGAAGTCAAG TGCTCGAGTA ATCGCCGATT CGATCATCAA TCTCGCCAAT 1020 AAAAACTTGA TAGAACTAGG CAGCCAGTTG GGTTGAGAAA GAATATGTTA CTGGTGTTTA 1080 TCCTAAAGCA CACATCTCCT GTATGTATAT GACCTCTGAA TAGAAGTGTA TAGTACTTTT 1140 ATTTTTGTGG AAAACATATA AGCCACAGAA AAGTTTTGTA CATAGCACGG GGCCTTCTTA 1200 AATCTTGACT ATGTGAATTC AGATACTCAA TGCATATAAA GAATTTCAGA AAAA
1255Nucleotide Fasta Sequence
>Si006784m|Class-I|Setaria italica ATGGCCTCCTCCTCCGCCTCGCCGGCGCCGGCGCCGGCCGGGGAGTCCCTACGGCAGAAACGCATCCTCTCCAGCAAGCTCTACCTCGAAGTCCCCTCGTCCAAGGCACCGGTGGTCTACTCGCCGGCCTACGACATCTCCTTCCTCGGCCTCGAGAAGCTGCACCCGTTTGATTCCGCCAAATGGGGGCGCATCTGCAGGTACCTCACCAGGGAAGGGCACCTGGAGAAGAAACAGGTCGTGGAGCCATTGGAAGCCTGCAAGGAGGATTTGCTAGTGGTTCACACGGAGGCGTATCTTAACAGCCTCAAATGCAGCTTCAGAGTCGCCTCCATTGTGGAGGTCCCTCCTGTGTCGCTTGTCCCTAATTGGATCGTGCAGAAAAAGCTACTATACCCATTCCGGAAGCAGGTTGGTGGGTCCATTTTGTCAGCGAAACTTGCACTCGAGAGAGGATGGGCTATTAATGTTGGTGGAGGATTTCACCATTGTTCGGCAGAGGAAGGAGGTGGATTTTGTGCGTACGCTGACATCTCTCTGTGCATCCAGTTTGCTTTTGTCCGTCTAAATATTTCACGTTTATTGATCATAGATCTGGATGCTCACCAAGGAAATGGACATGAAAAAGATTTTGCTAATGATGGAAGGGTTTACATTTTGGACATGTACAATGCTGGAATTTATCCCTTTGATTTCACTGCTAAGCAATACATCGATCAAAAAGTTGAATTAGCTAGCGGGACAAAAACAGATGAATACTTGGAGCTACTTGATAAGGCTCTCGAGGTCTGCAAAAGTAGGTTTCAACCCCAGTTGATTGTTTACAATGCTGGAACAGACATCCTTGATGGTGATCCATTGGGCAGATTGAAGATAAGTCCTGAGGGTGTAATTACCAGAGATGAGAAGGTGTTTAGATTTGCGAAAGATCAAAACATTCCACTGCTCATGCTGACGTCAGGAGGCTACATGAAGTCAAGTGCTCGAGTAATCGCCGATTCGATCATCAATCTCGCCAATAAAAACTTGATAGAACTAGGCAGCCAGTTGGGTTGAGAAAGAATATGTTACTGGTGTTTATCCTAAAGCACACATCTCCTGTATGTATATGACCTCTGAATAGAAGTGTATAGTACTTTTATTTTTGTGGAAAACATATAAGCCACAGAAAAGTTTTGTACATAGCACGGGGCCTTCTTAAATCTTGACTATGTGAATTCAGATACTCAATGCATATAAAGAATTTCAGAAAAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |