WERAM Information


Tag Content
WERAM ID WERAM-Sei-0028
Ensembl Protein ID Si006784m
Gene Name SETIT_006784mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si006784m.g Si006784m Si006784m
Si006784m.g Si006852m Si006852m
Si006784m.g Si007020m Si007020m
Si006784m.g Si007092m Si007092m
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.20e-27 96.9 40 326
Organism Setaria italica
Domain Profile
  HDAC Class-I

  class-1.txt   5 yaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv.epenaeelskelkkfnvgedcPvfdg.lfe 100
y d++ + ++ hp ++ + ++ g +k ++v+p +a +e+ll +h+e+y++ lk + ++ + e + ++ + v ++ l+
Si006784m 40 YSPAYDISFLGLEKLHPFDSAKWGRICRYLTREGHLEKKQVVEPLEACKEDLLVVHTEAYLNSLKCSfRVASIVE----VPPVSLVPNWIVQKKlLYP 133
555666666777888999999998877777777888888***********************9985413344334....4455555555555441788 PP
class-1.txt 101 ycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee 196
+ + ++G+ l+a L++ ain GG+hh +e Gfc Di l i+ + + + +r+l id+d h G+g e+ f + rv + + y+ +
Si006784m 134 FRKQVGGSILSAKLALER---GWAINVGGGFHHCSAEEGGGFCAYADISLCIQfAFVRlNISRLLIIDLDAHQGNGHEKDFANDGRVYILDM--YNAG 226
888877777777666654...579****************************8344555999*************************98766..6665 PP
class-1.txt 197 ffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh....aecvkfvksfnlpllv 290
+P +y v l g + ++y +++ + ++ ++f+P+ +v + G+D l gD+lg ++s +g ++ +f k+ n+pll+
Si006784m 227 IYPF-------DFTAKQYIDQKVELASGTKTDEYLELLDKALEVCKSRFQPQLIVYNAGTDILDGDPLGRLKISPEGVitrdEKVFRFAKDQNIPLLM 317
5664.......344456777889***************************************************999733324699************ PP
class-1.txt 291 lGGGGYtlr 299
l GGY +
Si006784m 318 LTSGGYMKS 326
******764 PP

Protein Sequence
(Fasta)
MASSSASPAP APAGESLRQK RILSSKLYLE VPSSKAPVVY SPAYDISFLG LEKLHPFDSA 60
KWGRICRYLT REGHLEKKQV VEPLEACKED LLVVHTEAYL NSLKCSFRVA SIVEVPPVSL 120
VPNWIVQKKL LYPFRKQVGG SILSAKLALE RGWAINVGGG FHHCSAEEGG GFCAYADISL 180
CIQFAFVRLN ISRLLIIDLD AHQGNGHEKD FANDGRVYIL DMYNAGIYPF DFTAKQYIDQ 240
KVELASGTKT DEYLELLDKA LEVCKSRFQP QLIVYNAGTD ILDGDPLGRL KISPEGVITR 300
DEKVFRFAKD QNIPLLMLTS GGYMKSSARV IADSIINLAN KNLIELGSQL G 351
Nucleotide Sequence
(Fasta)
ATGGCCTCCT CCTCCGCCTC GCCGGCGCCG GCGCCGGCCG GGGAGTCCCT ACGGCAGAAA 60
CGCATCCTCT CCAGCAAGCT CTACCTCGAA GTCCCCTCGT CCAAGGCACC GGTGGTCTAC 120
TCGCCGGCCT ACGACATCTC CTTCCTCGGC CTCGAGAAGC TGCACCCGTT TGATTCCGCC 180
AAATGGGGGC GCATCTGCAG GTACCTCACC AGGGAAGGGC ACCTGGAGAA GAAACAGGTC 240
GTGGAGCCAT TGGAAGCCTG CAAGGAGGAT TTGCTAGTGG TTCACACGGA GGCGTATCTT 300
AACAGCCTCA AATGCAGCTT CAGAGTCGCC TCCATTGTGG AGGTCCCTCC TGTGTCGCTT 360
GTCCCTAATT GGATCGTGCA GAAAAAGCTA CTATACCCAT TCCGGAAGCA GGTTGGTGGG 420
TCCATTTTGT CAGCGAAACT TGCACTCGAG AGAGGATGGG CTATTAATGT TGGTGGAGGA 480
TTTCACCATT GTTCGGCAGA GGAAGGAGGT GGATTTTGTG CGTACGCTGA CATCTCTCTG 540
TGCATCCAGT TTGCTTTTGT CCGTCTAAAT ATTTCACGTT TATTGATCAT AGATCTGGAT 600
GCTCACCAAG GAAATGGACA TGAAAAAGAT TTTGCTAATG ATGGAAGGGT TTACATTTTG 660
GACATGTACA ATGCTGGAAT TTATCCCTTT GATTTCACTG CTAAGCAATA CATCGATCAA 720
AAAGTTGAAT TAGCTAGCGG GACAAAAACA GATGAATACT TGGAGCTACT TGATAAGGCT 780
CTCGAGGTCT GCAAAAGTAG GTTTCAACCC CAGTTGATTG TTTACAATGC TGGAACAGAC 840
ATCCTTGATG GTGATCCATT GGGCAGATTG AAGATAAGTC CTGAGGGTGT AATTACCAGA 900
GATGAGAAGG TGTTTAGATT TGCGAAAGAT CAAAACATTC CACTGCTCAT GCTGACGTCA 960
GGAGGCTACA TGAAGTCAAG TGCTCGAGTA ATCGCCGATT CGATCATCAA TCTCGCCAAT 1020
AAAAACTTGA TAGAACTAGG CAGCCAGTTG GGTTGAGAAA GAATATGTTA CTGGTGTTTA 1080
TCCTAAAGCA CACATCTCCT GTATGTATAT GACCTCTGAA TAGAAGTGTA TAGTACTTTT 1140
ATTTTTGTGG AAAACATATA AGCCACAGAA AAGTTTTGTA CATAGCACGG GGCCTTCTTA 1200
AATCTTGACT ATGTGAATTC AGATACTCAA TGCATATAAA GAATTTCAGA AAAA 1255
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 93 0.0 658
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 93 0.0 656
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 86 1e-176 615
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 86 1e-176 615
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 86 1e-176 615
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 86 1e-176 615
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 86 1e-176 615
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 85 3e-176 614
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 85 2e-174 609
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 86 8e-174 606
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 83 2e-172 602
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 84 1e-166 582
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 82 2e-161 565
WERAM-Aet-0055 EMT26973 Aegilops tauschii 74 2e-157 552
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 85 2e-155 545
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 74 1e-152 536
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 75 4e-152 534
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 82 5e-151 531
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 72 2e-150 529
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 73 2e-148 522
WERAM-Met-0014 AES59273 Medicago truncatula 74 8e-148 520
WERAM-Thc-0103 EOY29884 Theobroma cacao 72 8e-148 520
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 71 3e-147 518
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 71 3e-147 518
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 71 9e-147 516
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 70 6e-144 507
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 69 1e-143 506
WERAM-Php-0013 PP1S127_95V6.1 Physcomitrella patens 67 1e-135 479
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 83 9e-128 454
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 64 1e-127 453
WERAM-Prp-0064 EMJ26901 Prunus persica 73 2e-121 432
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 88 2e-120 429
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 59 5e-114 408
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 59 2e-113 406
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 59 4e-113 405
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 58 5e-113 404
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 59 5e-113 404
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 59 6e-113 404
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 59 9e-113 404
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 59 9e-113 404
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 58 1e-112 403
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 58 1e-112 403
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 58 1e-112 403
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 59 1e-112 403
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 58 2e-112 403
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 59 2e-112 402
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 59 2e-112 402
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 58 3e-112 402
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 58 3e-112 402
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 59 3e-112 402
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 58 5e-112 401
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 59 7e-112 401
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 59 1e-111 399
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 58 2e-111 399
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 57 3e-111 399
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 58 3e-111 399
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 58 3e-111 399
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 58 5e-111 398
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 58 1e-110 397
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 59 1e-110 397
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 57 2e-110 396
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 57 3e-109 392
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 58 4e-109 392
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 58 4e-109 391
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 58 3e-108 389
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 58 6e-108 388
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 56 2e-107 385
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 58 2e-106 383
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 61 1e-105 380
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 76 3e-105 379
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 54 1e-104 377
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 56 5e-104 374
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 59 9e-104 374
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 59 1e-103 373
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 59 1e-103 373
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 55 2e-102 370
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 53 5e-99 358
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 51 2e-95 346
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 61 6e-94 341
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 51 4e-93 338
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 52 2e-91 333
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 56 3e-91 332
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 58 6e-88 321
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 51 2e-86 316
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 60 1e-85 313
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 48 1e-82 304
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 46 1e-81 300
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 58 6e-81 298
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 49 6e-76 281
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 68 1e-74 276
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 61 1e-68 257
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 37 3e-53 206
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 56 1e-45 181
WERAM-Amt-0062 ERN16364 Amborella trichopoda 68 2e-44 177
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 38 2e-43 174
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 54 2e-40 163
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 55 1e-34 144
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 28 1e-29 127
WERAM-Osl-0037 ABP00055 Ostreococcus lucimarinus 29 3e-26 116
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 29 3e-25 113
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 27 3e-21 99.8
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 28 1e-20 97.8
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 28 3e-20 97.1
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 25 4e-19 92.8
WERAM-Pug-0033 EFP89819 Puccinia graminis 32 4e-19 92.8
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 33 6e-19 92.4
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 27 8e-19 92.0
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 28 2e-18 90.5
WERAM-Vip-0110 ENSVPAP00000010202.1 Vicugna pacos 25 3e-18 90.1
WERAM-Scs-0017 EDO01763 Sclerotinia sclerotiorum 28 5e-18 89.4
WERAM-Caa-0015 KGT70099 Candida albicans 27 6e-18 89.0
WERAM-Lab-0007 EDR12637 Laccaria bicolor 28 1e-17 87.8
WERAM-Soa-0084 ENSSARP00000008041.1 Sorex araneus 27 3e-17 86.7
Created Date 25-Jun-2016