WERAM Information

Tag Content
WERAM ID WERAM-Sob-0134
Ensembl Protein ID Sb10g022550.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb10g022550 Sb10g022550.1 Sb10g022550.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 8.90e-26 92 39 325
Organism Sorghum bicolor
Domain Profile
  HDAC Class-I
    class-1.txt   5 yaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv.epenaeelskelkkfnvgedcPvfdg.l 98 
                    y    d++ +  ++ hp    ++  +   ++  g   k ++v p +a +e+ll +h+e+y++ lk++ +++n  e++      ++  +  v ++ l
  Sb10g022550.1  39 YSPAYDISFLGLEKLHPFDSAKWGRICRYLTREGYLDKKRMVDPLEACKEDLLVVHTEAYLNSLKSSfRVSNIVEVP----PVSLVPNWIVHKKlL 130
                    55556666666778888888888888888878788888899***********************9761444544544....555555666655516 PP
    class-1.txt  99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlaile.llk.khkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
                    + + + ++G+ l+a   L++     ain  GG+hh   +e  Gfc   Di l i+  + + + + vl id+d h G+g e+ f +  rv    f  
  Sb10g022550.1 131 YPFRKQVGGSILSAKLALER---GWAINVGGGFHHCSADEGGGFCAYADISLCIQFaFARlNISSVLIIDLDAHQGNGHEKDFANDGRVYI--FDM 221
                    88888777777777666654...579****************************86144557899************************87..667 PP
    class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae....cvkfvksf 284
                    y+ + +P             +y    v l  g + ++y + + + ++   ++f+P+ +v + G+D l gD+lg  ++s +g  +    +  f k+ 
  Sb10g022550.1 222 YNAGIYPF-------DFTAKQYIDQKVELASGTETDEYLEQLDKALEVCNSRFQPQLIVYNAGTDILDGDPLGRLKVSPEGVVTrdekVFTFAKDQ 310
                    88866774.......344556777889******999999999999*********************************9997532334999***** PP
    class-1.txt 285 nlpllvlGGGGYtlr 299
                    n+pll+l  GGY + 
  Sb10g022550.1 311 NIPLLMLTSGGYMKS 325
                    ************764 PP
Protein Sequence
(Fasta)		MASSSSPAPT LAGEALRQKR ILSSKLYLEV PSSKAPVVYS PAYDISFLGL EKLHPFDSAK 60
WGRICRYLTR EGYLDKKRMV DPLEACKEDL LVVHTEAYLN SLKSSFRVSN IVEVPPVSLV 120
PNWIVHKKLL YPFRKQVGGS ILSAKLALER GWAINVGGGF HHCSADEGGG FCAYADISLC 180
IQFAFARLNI SSVLIIDLDA HQGNGHEKDF ANDGRVYIFD MYNAGIYPFD FTAKQYIDQK 240
VELASGTETD EYLEQLDKAL EVCNSRFQPQ LIVYNAGTDI LDGDPLGRLK VSPEGVVTRD 300
EKVFTFAKDQ NIPLLMLTSG GYMKSSARVI ADSIINLSNK NLIGLGSELG
Nucleotide Sequence
(Fasta)		ATGGCCTCCT CCTCCTCACC GGCGCCCACC CTGGCCGGGG AGGCTCTACG CCAGAAACGC 60
ATCCTCTCCA GCAAGCTCTA CCTCGAGGTC CCCTCCTCCA AGGCGCCGGT GGTGTACTCG 120
CCGGCATACG ACATCTCCTT CCTCGGGCTT GAGAAGCTGC ACCCGTTTGA TTCCGCCAAA 180
TGGGGCCGCA TCTGCAGGTA CCTCACCAGG GAAGGGTACC TGGACAAGAA ACGGATGGTG 240
GATCCATTGG AAGCCTGCAA GGAGGATTTG CTAGTGGTGC ACACAGAGGC GTATCTGAAC 300
AGTCTCAAAA GCAGCTTCAG AGTTTCCAAC ATTGTAGAGG TCCCTCCTGT CTCGCTTGTC 360
CCTAATTGGA TTGTGCACAA GAAGCTATTA TACCCCTTCC GGAAGCAGGT GGGTGGGTCC 420
ATTTTATCAG CCAAACTTGC GCTTGAGAGA GGATGGGCCA TTAATGTTGG TGGAGGATTT 480
CACCATTGTT CGGCAGATGA AGGGGGTGGA TTTTGTGCAT ATGCTGACAT CTCTCTCTGC 540
ATCCAGTTTG CTTTTGCCCG TCTAAATATC TCAAGTGTAT TGATCATAGA CCTGGATGCC 600
CACCAAGGAA ATGGACACGA AAAAGATTTT GCTAATGATG GAAGGGTTTA CATTTTTGAC 660
ATGTACAATG CTGGAATTTA TCCCTTTGAT TTCACTGCTA AGCAATACAT TGATCAAAAA 720
GTAGAATTAG CTAGTGGAAC AGAAACAGAT GAATACTTGG AGCAACTTGA CAAGGCTCTT 780
GAGGTCTGCA ATAGTAGATT TCAGCCCCAG TTGATTGTTT ACAATGCTGG AACAGACATC 840
CTGGATGGTG ATCCGTTGGG CAGATTGAAG GTAAGTCCTG AGGGTGTGGT TACCAGAGAC 900
GAGAAGGTAT TTACGTTCGC AAAAGATCAA AACATTCCTC TGCTGATGCT GACATCAGGA 960
GGCTACATGA AGTCAAGTGC TCGAGTAATA GCTGATTCGA TCATCAATCT GTCCAACAAA 1020
AACTTGATAG GATTAGGCAG CGAGCTGGGT TGA 1054
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 95 0.0 671
WERAM-Sei-0028 Si006784m Setaria italica 93 0.0 656
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 83 2e-171 598
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 83 3e-171 598
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 83 3e-171 598
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 83 3e-171 598
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 83 3e-171 598
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 83 3e-171 598
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 83 7e-170 593
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 83 1e-169 592
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 81 6e-169 590
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 81 1e-160 562
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 79 5e-157 551
WERAM-Aet-0055 EMT26973 Aegilops tauschii 72 1e-153 539
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 83 9e-152 533
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 70 5e-150 527
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 73 4e-149 525
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 73 8e-149 523
WERAM-Met-0014 AES59273 Medicago truncatula 71 6e-147 517
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 79 2e-146 516
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 71 3e-146 515
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 71 1e-145 513
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 70 4e-145 511
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 70 6e-145 510
WERAM-Thc-0103 EOY29884 Theobroma cacao 71 5e-144 507
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 68 1e-141 499
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 68 3e-141 498
WERAM-Php-0013 PP1S127_95V6.1 Physcomitrella patens 66 4e-132 468
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 63 3e-128 455
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 79 9e-127 450
WERAM-Prp-0064 EMJ26901 Prunus persica 71 2e-120 429
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 85 1e-117 419
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 58 1e-113 407
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 58 7e-113 404
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 58 1e-112 404
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 58 1e-112 403
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 57 2e-112 402
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 57 2e-112 402
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 58 2e-112 402
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 58 3e-112 402
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 59 3e-112 402
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 57 3e-112 402
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 58 5e-112 401
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 58 5e-112 401
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 58 5e-112 401
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 58 7e-112 400
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 59 7e-112 400
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 58 8e-112 400
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 58 8e-112 400
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 57 8e-112 400
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 58 1e-111 400
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 58 1e-111 400
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 57 2e-111 399
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 59 6e-111 398
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 57 7e-111 397
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 59 9e-111 397
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 58 1e-110 397
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 57 1e-110 396
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 58 1e-110 396
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 56 1e-109 394
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 57 2e-109 392
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 57 3e-109 392
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 57 1e-108 390
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 57 3e-108 389
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 57 6e-107 384
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 57 2e-106 382
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 54 1e-105 380
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 57 3e-105 379
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 55 6e-105 378
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 59 9e-105 377
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 55 1e-103 373
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 58 3e-103 372
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 58 3e-103 372
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 54 3e-103 372
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 58 6e-103 371
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 74 1e-102 370
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 53 9e-99 357
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 50 5e-96 348
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 51 4e-93 338
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 60 4e-92 335
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 51 5e-91 332
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 55 2e-89 326
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 57 1e-87 320
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 51 9e-87 317
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 59 9e-85 310
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 48 7e-84 308
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 45 3e-82 302
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 57 9e-81 297
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 49 6e-76 281
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 67 2e-72 270
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 61 2e-69 259
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 37 3e-53 206
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 38 7e-45 178
WERAM-Amt-0062 ERN16364 Amborella trichopoda 67 7e-45 178
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 55 6e-44 175
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 55 3e-40 163
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 55 2e-35 147
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 30 3e-30 130
WERAM-Osl-0037 ABP00055 Ostreococcus lucimarinus 30 9e-28 121
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 29 7e-25 112
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 28 2e-20 97.1
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 29 3e-20 96.7
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 28 5e-19 92.8
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 25 6e-18 89.0
WERAM-Pug-0033 EFP89819 Puccinia graminis 27 2e-17 87.4
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 30 4e-17 86.3
WERAM-Scs-0017 EDO01763 Sclerotinia sclerotiorum 30 4e-17 86.3
WERAM-Vip-0110 ENSVPAP00000010202.1 Vicugna pacos 25 1e-16 84.7
WERAM-Scj-0027 EEB08472 Schizosaccharomyces japonicus 33 2e-16 84.0
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 27 4e-16 83.2
WERAM-Lab-0007 EDR12637 Laccaria bicolor 28 7e-16 82.0
WERAM-Caa-0015 KGT70099 Candida albicans 27 7e-16 82.0
Created Date 25-Jun-2016