WERAM Information

Tag Content
WERAM ID WERAM-Sob-0083
Ensembl Protein ID Sb05g007010.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb05g007010 Sb05g007010.1 Sb05g007010.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.50e-13 49.3 197 246
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    t+C +Cg+++ +++++++Cd C++wfH+kCvk++  +++  k++ Cp+C 
  Sb05g007010.1 197 TLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCS 246
                    78****999999999*******************555554479******7 PP
Protein Sequence
(Fasta)		MDGGGTHRTP EDVFRDFRAR RAGMIKALTT DVEKFYQQCD PEKENLCLYG LPNETWEVNL 60
PAEEVPPELP EPALGINFAR DGMDEKDWLS LVAVHSDAWL LAVAFYFGAR FGFDKESRKR 120
LFVMINNLPT IYEVVTGTAK KQTKEKTPKS SSKSNKSGSK PPRQPEPNSR GSKMPPPKDE 180
DDSGGEEEEE EEDHENTLCG ACGDNYGQDE FWICCDACET WFHGKCVKIT PAKAEHIKHY 240
KCPNCSGSSK RARV 254
Nucleotide Sequence
(Fasta)		CCCCCGTCCC CCCACCCCCA CCCCGCCTCG CTCCCAGCCT CCCCAAAAAC CCTAACCCTA 60
GCCAGCACCC GCACCGGGGA GATGGACGGC GGCGGCACGC ACCGCACGCC GGAAGACGTG 120
TTCCGGGACT TCCGCGCGCG GCGGGCTGGC ATGATCAAAG CGCTCACCAC CGACGTGGAG 180
AAGTTCTACC AGCAGTGTGA CCCAGAGAAA GAGAATCTGT GTTTGTATGG TCTTCCCAAT 240
GAAACATGGG AAGTGAACTT GCCTGCAGAG GAGGTTCCTC CTGAACTTCC AGAGCCAGCT 300
CTGGGAATTA ATTTTGCTCG TGACGGGATG GATGAGAAAG ATTGGCTGTC ACTAGTAGCG 360
GTGCACAGTG ATGCTTGGTT GCTGGCTGTG GCCTTTTACT TTGGTGCAAG ATTTGGATTT 420
GACAAAGAAT CCAGGAAGCG GCTTTTTGTC ATGATTAATA ACCTCCCTAC CATATATGAA 480
GTTGTCACGG GAACTGCCAA GAAGCAAACC AAGGAGAAAA CTCCCAAAAG CAGCAGCAAG 540
AGCAATAAAT CTGGCTCAAA ACCACCACGC CAGCCAGAAC CCAACTCAAG GGGTTCCAAG 600
ATGCCACCTC CAAAGGATGA GGATGATAGC GGAGGCGAGG AAGAGGAGGA AGAGGAAGAT 660
CATGAAAACA CATTGTGTGG TGCTTGTGGT GACAACTACG GACAGGATGA GTTCTGGATA 720
TGCTGTGATG CCTGTGAGAC TTGGTTCCAT GGCAAGTGTG TCAAGATCAC TCCTGCCAAG 780
GCCGAGCACA TCAAGCACTA CAAGTGTCCG AACTGCAGTG GTAGTAGCAA GAGAGCGCGG 840
GTGTGATCCT GCTGGATATA TCCATCTCTC ATGCCTGAAG AACCAAGAAT TTGACTTGCT 900
GTAAAACGGG TCGAATGCCC GATGGTTATG CATTTAGTTG TTGCTTTCAG TTTAGGACCA 960
GCTGTAGGGT CTTGATGTGC TGTTTGTTGT ATGTCAGAGA CATTCTAGAT CTATTGTTAG 1020
TAACTAGGAA CTAACTGTAG TAGCCTGTAT TTCTTCAAGC TTCTCCCAGT GCGCCTGTAC 1080
TGGACTGAGA AACTGTTTTA GATCTAAGTT GTGCATTATG TACGACCGTC TACTCATGTT 1140
AGTTTGTTAA AAAGTTGTGT GCTGGCATTC TCTGCGTGCA TACTCAT 1188
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 97 1e-107 386
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 96 5e-107 384
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 96 5e-107 384
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 96 5e-107 384
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 96 5e-107 384
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 96 5e-107 384
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 96 5e-107 384
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 96 5e-107 384
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 96 5e-107 384
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 95 2e-104 375
WERAM-Brd-0098 BRADI4G21040.1 Brachypodium distachyon 94 4e-104 374
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 96 2e-103 372
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 95 1e-92 336
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 77 2e-90 329
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 76 1e-84 310
WERAM-Sei-0086 Si023009m Setaria italica 77 2e-83 306
WERAM-Amt-0088 ERM99796 Amborella trichopoda 73 3e-83 305
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 71 7e-83 303
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 73 6e-82 301
WERAM-Sol-0018 Solyc01g102760.2.1 Solanum lycopersicum 74 8e-82 300
WERAM-Prp-0081 EMJ24886 Prunus persica 75 4e-81 298
WERAM-Thc-0075 EOY26404 Theobroma cacao 74 4e-81 298
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 73 1e-80 296
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 70 1e-80 296
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 73 7e-80 294
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 73 9e-80 293
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 71 2e-79 292
WERAM-Aet-0106 EMT19247 Aegilops tauschii 71 3e-79 292
WERAM-Met-0117 KEH32736 Medicago truncatula 70 3e-78 288
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 74 1e-77 286
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 69 2e-76 282
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 68 6e-75 277
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 5e-68 254
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 2e-67 252
Created Date 25-Jun-2016