WERAM Information

Tag Content
WERAM ID WERAM-Pot-0074
Ensembl Protein ID POPTR_0006s10180.1
Gene Name POPTR_0006s10180g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0006s10180 POPTR_0006s10180.1 POPTR_0006s10180.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-12 49.1 184 234
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C  Cg +++ +++++ Cd C++w+H+kCvk++  ++++ k++ CpsC++
  POPTR_0006s10180.1 184 TLCGSCGGNYNSDEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCMK 234
                         78****888888889*******************555554489******97 PP
Protein Sequence
(Fasta)		MEMTSSPRTV EEIFKDFSAR RAAVVRALTY DVDGFYGLCD PDKENLCLYG HPNETWEVTL 60
PAEEVPPELP EPALGINFAR DGMNRKDWLS LVAVHSDSWL LSVAFYLGAR LNRNERKRLF 120
SLINDLPTVF EVVTERKPVK EKPSVDSGSK SRGSIKRSSD GLTKSNPKLT EDSFEEEEDE 180
HTQTLCGSCG GNYNSDEFWI GCDVCERWYH GKCVKITPAK AESIKQYKCP SCMKRSRP 238
Nucleotide Sequence
(Fasta)		TTCGTATCAT CCTCCCTTCC ATCCCCTGTC TCTCTTTCAT GCTCTTACCG TACAACAATC 60
CCTATAATTT CTTAAAATTA TCCAGTAAAT AAATAAATAA ATAAATATAT TTTTAGATCT 120
TTGTAGTTAA TTGTCCATGG AAATGACTTC AAGCCCACGA ACCGTAGAGG AGATCTTCAA 180
AGATTTCAGT GCTAGAAGAG CTGCTGTCGT CCGTGCTTTA ACTTATGATG TGGATGGTTT 240
TTATGGACTC TGTGATCCAG ATAAGGAGAA TTTGTGTCTG TATGGACATC CAAATGAAAC 300
ATGGGAAGTA ACCCTGCCAG CAGAGGAAGT TCCACCAGAG CTTCCTGAAC CTGCCCTTGG 360
AATTAATTTT GCTAGAGATG GAATGAACAG AAAAGACTGG CTTTCACTGG TTGCCGTGCA 420
TAGTGATTCA TGGTTGCTTT CTGTGGCTTT CTATCTTGGT GCTCGTCTTA ATAGGAATGA 480
AAGGAAAAGG CTGTTCAGCC TGATCAATGA TCTGCCTACT GTCTTTGAAG TTGTAACAGA 540
AAGGAAGCCT GTGAAAGAAA AGCCTAGTGT AGATAGTGGA AGCAAATCTC GAGGCAGCAT 600
AAAGAGATCA AGTGATGGAC TAACGAAAAG CAACCCTAAG CTTACAGAAG ATAGTTTTGA 660
GGAGGAAGAA GATGAACATA CTCAAACTCT ATGTGGGAGC TGTGGTGGAA ATTACAACTC 720
CGATGAATTC TGGATCGGCT GTGATGTCTG CGAGAGGTGG TACCATGGAA AGTGTGTGAA 780
GATAACTCCT GCTAAGGCTG AGAGTATTAA GCAATACAAG TGTCCATCTT GTATGAAGAG 840
GAGCCGGCCA TAGTCAGTGT CGTTGCGGTG GCAGACAAAG TAGTGAACAT TATCCTTGTG 900
CAATGTGAAA GTTAAAATAC TTGTTTATAA CAGATGCCTC CAACTGTTTA GTTTGCCTTC 960
TTCCCAACTG AACCCTTTGC TTGAATAGCA GGTTATGTAA TCTGATCTCT TTTTTATGTT 1020
AAATGCATGA ATAATATTAA ACTAGAGATG ACTTGCT 1058
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0083 EMJ07006 Prunus persica 91 7e-101 363
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 87 7e-99 357
WERAM-Thc-0059 EOY07191 Theobroma cacao 86 3e-98 354
WERAM-Met-0092 KEH28874 Medicago truncatula 87 2e-94 342
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 86 2e-94 342
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 81 1e-91 333
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 80 5e-91 330
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 77 3e-88 322
WERAM-Amt-0010 ERN05231 Amborella trichopoda 77 3e-85 311
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 81 5e-85 311
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 81 5e-85 311
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 76 3e-82 301
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 77 3e-81 298
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 69 4e-79 291
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 66 9e-79 290
WERAM-Sei-0039 Si010912m Setaria italica 66 4e-78 288
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 70 8e-78 287
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 68 2e-77 285
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 68 2e-77 285
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 68 2e-77 285
WERAM-Ori-0031 BGIOSGA009559-PA Oryza indica 68 2e-77 285
WERAM-Orgl-0042 OGLUM03G38760.1 Oryza glumaepatula 68 2e-77 285
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 68 2e-77 285
WERAM-Org-0041 ORGLA03G0356800.1 Oryza glaberrima 68 2e-77 285
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 65 9e-77 283
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 66 2e-76 282
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 65 3e-76 281
WERAM-Zem-0083 GRMZM2G148810_P01 Zea mays 65 4e-76 281
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 64 9e-76 280
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 63 7e-75 277
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 66 3e-73 271
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 2e-72 269
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 3e-72 268
WERAM-Aet-0099 EMT23706 Aegilops tauschii 57 3e-67 251
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 65 8e-59 224
Created Date 25-Jun-2016