WERAM Information

Tag Content
WERAM ID WERAM-Pot-0016
Ensembl Protein ID POPTR_0001s37680.1
Gene Name POPTR_0001s37680g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s37680 POPTR_0001s37680.1 POPTR_0001s37680.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 9.20e-65 219.7 36 266
Organism Populus trichocarpa
Domain Profile
  HDAC SIR2
            SIR2.txt   2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkvfyalakelyplgsakPtktHyflaelekk 92 
                         +la++++ksk++vv+tGAGiSts+GIPDFR+++G+++  +++     +++ + +                +p+++a P++tH++l elek+
  POPTR_0001s37680.1  36 RLAEMIQKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREG-----KPLPEAS----------------LPFHRAMPSMTHMALVELEKA 105
                         7899********************************996665.....4433444................5677899************** PP
            SIR2.txt  93 gkllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkakekvpkCek..Ckgvlkpdivffgenlpeefleeve 181
                         g l+++++QN+DgL++++g++++kl elHG+ +++ C +C+ e+ r++ +e++  ke+ ++C++  C+++lk++++ ++++lp++++  +e
  POPTR_0001s37680.1 106 GILKFIISQNVDGLHLRSGIPREKLAELHGNSFMEVCPSCGVEYFRDFEVETIGLKETSRRCSDvkCGAKLKDTVLDWEDALPTKEMLPAE 196
                         **************************************************************9888************************* PP
            SIR2.txt 182 edlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevveellkllgl 251
                         ++++ ad++l+lGtSl+++p+++l++k+ + + ++++vnl+++++dk+a+l+++g +d+v++ +++ll+l
  POPTR_0001s37680.1 197 KHCRMADVVLCLGTSLQITPACNLPLKCLRGGGKIIIVNLQKTPKDKKASLVIHGFVDKVIAGVMNLLNL 266
                         *****************************************************************99886 PP
Protein Sequence
(Fasta)		MSLGYAEKLS YIEDVGNVGM SEFFDSSHVL QEKIERLAEM IQKSKHLVVF TGAGISTSCG 60
IPDFRGPKGI WTLQREGKPL PEASLPFHRA MPSMTHMALV ELEKAGILKF IISQNVDGLH 120
LRSGIPREKL AELHGNSFME VCPSCGVEYF RDFEVETIGL KETSRRCSDV KCGAKLKDTV 180
LDWEDALPTK EMLPAEKHCR MADVVLCLGT SLQITPACNL PLKCLRGGGK IIIVNLQKTP 240
KDKKASLVIH GFVDKVIAGV MNLLNLRIAP YVRIDLLQVI ITQSLSLDER YVNWNLRVAS 300
IHALKAPLPF IESIEVSFTD AQKYKAAVLH DQPFNLKRRT APAEAFEILL KLNFSDGCGC 360
PSIQINVPVN FKVSSDCFNL DKESAIQNLK ERAIQDLCCG QNALIERKVI LEPKTEVANH 420
ALVTNIKAFN SDSWSNGDVK HPRGVNGTKT SRKRSFGRKR KSRF 464
Nucleotide Sequence
(Fasta)		CTCCTTAAAA GAAGCAAAAG AAACACTTTT TTATTGGTGG AATGCTTTTT CCTTGAGAAC 60
AAATAGAAAA CTCTCTTCTT CTTTACAGCT CTGATCACCA TGTCTCTGGG TTATGCAGAA 120
AAGCTTTCTT ACATTGAAGA TGTGGGCAAC GTTGGAATGT CAGAATTCTT CGACTCATCT 180
CATGTTTTGC AAGAAAAAAT TGAAAGACTT GCTGAGATGA TACAAAAGAG CAAGCATCTA 240
GTTGTGTTTA CAGGTGCAGG AATATCAACA TCTTGTGGCA TACCTGATTT TCGAGGTCCC 300
AAGGGAATTT GGACGTTACA GCGCGAGGGA AAACCATTAC CTGAAGCATC GCTACCATTT 360
CATCGAGCAA TGCCAAGCAT GACACACATG GCTTTGGTTG AGCTGGAGAA GGCTGGCATT 420
TTAAAGTTTA TTATTAGCCA GAATGTCGAT GGCCTCCATC TTCGGTCTGG AATACCAAGG 480
GAGAAACTTG CTGAATTACA TGGGAATTCC TTCATGGAAG TTTGCCCTTC ATGTGGTGTT 540
GAGTATTTTC GGGATTTTGA GGTTGAAACT ATTGGGTTGA AGGAGACATC AAGACGCTGC 600
TCTGATGTCA AATGTGGAGC AAAGCTAAAA GATACAGTTC TTGACTGGGA GGATGCATTG 660
CCCACAAAGG AGATGCTTCC AGCTGAGAAA CACTGCAGGA TGGCTGATGT TGTATTATGT 720
TTGGGGACAA GTTTGCAAAT CACTCCTGCA TGCAATCTGC CTTTAAAATG TCTCCGAGGT 780
GGGGGAAAGA TTATAATTGT GAATCTTCAG AAAACTCCGA AGGATAAGAA GGCAAGTTTG 840
GTGATCCATG GATTTGTAGA CAAGGTTATT GCAGGGGTCA TGAACTTGCT CAATTTGAGG 900
ATTGCTCCAT ATGTCAGGAT TGATCTTCTT CAAGTTATCA TAACTCAGTC ATTGAGTTTA 960
GATGAAAGAT ATGTGAACTG GAACCTCCGG GTGGCAAGTA TACATGCACT GAAAGCACCG 1020
TTGCCATTCA TCGAGTCCAT TGAGGTGTCC TTCACAGATG CTCAAAAATA CAAAGCGGCT 1080
GTGCTACATG ACCAGCCATT TAACCTAAAA AGGAGGACTG CACCAGCAGA AGCATTTGAA 1140
ATCCTCTTGA AACTCAACTT CAGTGATGGA TGTGGTTGTC CCTCCATCCA AATTAATGTC 1200
CCTGTCAATT TTAAGGTTTC AAGTGACTGC TTTAACCTTG ACAAGGAGTC GGCCATACAA 1260
AATCTGAAGG AGAGGGCAAT TCAAGATTTG TGCTGTGGTC AGAATGCACT GATCGAAAGA 1320
AAGGTCATTT TAGAGCCAAA AACCGAGGTT GCAAACCATG CTTTAGTAAC CAACATTAAA 1380
GCTTTCAATT CTGATTCTTG GAGTAATGGT GATGTGAAAC ATCCAAGAGG GGTTAATGGG 1440
ACCAAAACAT CTCGGAAGCG ATCGTTTGGT CGCAAGCGTA AATCGAGATT TTAG 1495
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Glm-0232 GLYMA18G08450.1 Glycine max 77 0.0 726
WERAM-Prp-0059 EMJ12601 Prunus persica 75 0.0 717
WERAM-Met-0085 KEH34091 Medicago truncatula 74 0.0 701
WERAM-Viv-0122 VIT_19s0015g00570.t01 Vitis vinifera 75 0.0 696
WERAM-Brr-0144 Bra028961.1-P Brassica rapa 73 0.0 694
WERAM-Sol-0101 Solyc07g065550.2.1 Solanum lycopersicum 74 0.0 690
WERAM-Arl-0111 fgenesh2_kg.8__ 1477__ AT5G55760.1 Arabidopsis lyrata 74 0.0 689
WERAM-Bro-0046 Bo3g021360.1 Brassica oleracea 72 0.0 686
WERAM-Art-0143 AT5G55760.1 Arabidopsis thaliana 72 0.0 683
WERAM-Sot-0070 PGSC0003DMT400057382 Solanum tuberosum 74 0.0 630
WERAM-Amt-0008 ERN05726 Amborella trichopoda 67 2e-177 619
WERAM-Mua-0125 GSMUA_Achr8P24470_001 Musa acuminata 68 1e-170 596
WERAM-Sob-0090 Sb06g020390.1 Sorghum bicolor 63 2e-162 569
WERAM-Orbr-0051 OB04G14570.1 Oryza brachyantha 63 2e-160 563
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 64 7e-159 557
WERAM-Ors-0038 OS04T0271000-01 Oryza sativa 64 5e-158 555
WERAM-Tra-0045 Traes_2AS_69329D634.2 Triticum aestivum 63 5e-158 555
WERAM-Brd-0122 BRADI5G02940.2 Brachypodium distachyon 63 7e-158 554
WERAM-Ori-0050 BGIOSGA015454-PA Oryza indica 64 8e-157 550
WERAM-Aet-0057 EMT21754 Aegilops tauschii 55 3e-138 489
WERAM-Php-0065 PP1S272_33V6.1 Physcomitrella patens 53 4e-132 468
WERAM-Sei-0037 Si010693m Setaria italica 74 3e-128 455
WERAM-Orl-0053 KN539062.1_FGP005 Oryza longistaminata 56 2e-123 439
WERAM-Zem-0044 GRMZM2G058573_P01 Zea mays 76 3e-119 426
WERAM-Lep-0045 LPERR04G03890.1 Leersia perrieri 77 3e-118 422
WERAM-Sah-0106 ENSSHAP00000011597.1 Sarcophilus harrisii 53 3e-79 293
WERAM-Xet-0167 ENSXETP00000057383.2 Xenopus tropicalis 55 3e-79 293
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 52 3e-79 293
WERAM-Pof-0157 ENSPFOP00000012793.2 Poecilia formosa 53 2e-78 290
WERAM-Lac-0065 ENSLACP00000008822.2 Latimeria chalumnae 52 3e-78 290
WERAM-Xim-0231 ENSXMAP00000019352.1 Xiphophorus maculatus 52 6e-78 288
WERAM-Mum-0135 ENSMUSP00000048971.8 Mus musculus 45 1e-77 287
WERAM-Tar-0090 ENSTRUP00000017073.1 Takifugu rubripes 52 3e-77 286
WERAM-Ict-0164 ENSSTOP00000015068.1 Ictidomys tridecemlineatus 50 3e-77 286
WERAM-Gaa-0163 ENSGACP00000020196.1 Gasterosteus aculeatus 53 5e-77 285
WERAM-Soa-0094 ENSSARP00000008710.1 Sorex araneus 50 7e-77 285
WERAM-Mam-0185 ENSMMUP00000026241.2 Macaca mulatta 50 1e-76 284
WERAM-Orn-0127 ENSONIP00000012860.1 Oreochromis niloticus 52 3e-76 283
WERAM-Ran-0038 ENSRNOP00000008758.3 Rattus norvegicus 51 3e-76 283
WERAM-Otg-0026 ENSOGAP00000001481.2 Otolemur garnettii 51 4e-76 282
WERAM-Mup-0054 ENSMPUP00000004703.1 Mustela putorius furo 50 5e-76 282
WERAM-Gaga-0011 ENSGALP00000001888.3 Gallus gallus 50 6e-76 282
WERAM-Paa-0028 ENSPANP00000011086.1 Papio anubis 50 6e-76 282
WERAM-Meg-0032 ENSMGAP00000002578.1 Meleagris gallopavo 50 6e-76 282
WERAM-Pat-0085 ENSPTRP00000017501.2 Pan troglodytes 50 7e-76 281
WERAM-Gog-0100 ENSGGOP00000008641.2 Gorilla gorilla 50 7e-76 281
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 51 8e-76 281
WERAM-Hos-0033 ENSP00000337332.1 Homo sapiens 50 1e-75 281
WERAM-Caj-0156 ENSCJAP00000027893.2 Callithrix jacchus 49 1e-75 281
WERAM-Poa-0078 ENSPPYP00000010537.2 Pongo abelii 50 1e-75 280
WERAM-Chs-0131 ENSCSAP00000006979.1 Chlorocebus sabaeus 50 1e-75 280
WERAM-Caf-0197 ENSCAFP00000028217.2 Canis familiaris 49 2e-75 280
WERAM-Bot-0171 ENSBTAP00000026521.5 Bos taurus 50 3e-75 280
WERAM-Loa-0191 ENSLAFP00000023357.1 Loxodonta africana 50 3e-75 280
WERAM-Aim-0033 ENSAMEP00000002298.1 Ailuropoda melanoleuca 49 2e-74 277
WERAM-Cis-0072 ENSCSAVP00000015450.1 Ciona savignyi 48 5e-74 275
WERAM-Fia-0011 ENSFALP00000000954.1 Ficedula albicollis 52 3e-73 273
WERAM-Gam-0126 ENSGMOP00000013105.1 Gadus morhua 51 1e-72 271
WERAM-Ova-0116 ENSOARP00000011370.1 Ovis aries 48 2e-72 270
WERAM-Pes-0079 ENSPSIP00000009554.1 Pelodiscus sinensis 52 3e-71 266
WERAM-Sus-0098 ENSSSCP00000014344.2 Sus scrofa 47 2e-70 264
WERAM-Myl-0098 ENSMLUP00000007946.2 Myotis lucifugus 50 2e-69 260
WERAM-Drm-0064 FBpp0293897 Drosophila melanogaster 47 1e-67 254
WERAM-Eqc-0160 ENSECAP00000016959.1 Equus caballus 41 6e-48 189
WERAM-Anp-0140 ENSAPLP00000015159.1 Anas platyrhynchos 42 2e-46 184
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 35 2e-24 110
WERAM-Thc-0008 EOX92647 Theobroma cacao 29 4e-23 106
WERAM-Ast-0001 CADATEAP00000292 Aspergillus terreus 33 6e-23 106
WERAM-Scs-0014 EDN99996 Sclerotinia sclerotiorum 33 7e-23 105
WERAM-Trr-0018 EGR46788 Trichoderma reesei 32 8e-23 105
WERAM-Sem-0060 EFJ23112 Selaginella moellendorffii 32 1e-22 105
WERAM-Pyt-0039 EFQ86136 Pyrenophora teres 32 3e-22 103
WERAM-Asc-0026 CADACLAP00005809 Aspergillus clavatus 35 3e-22 103
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 30 5e-21 99.8
WERAM-Trv-0012 EHK19002 Trichoderma virens 31 2e-20 98.2
WERAM-Mao-0040 MGG_17827T0 Magnaporthe oryzae 30 1e-19 95.1
WERAM-Pytr-0009 EDU41553 Pyrenophora triticirepentis 33 1e-19 95.1
WERAM-Fuo-0021 FOXG_06023P0 Fusarium oxysporum 30 3e-19 94.0
WERAM-Lem-0007 CBY02082 Leptosphaeria maculans 33 3e-19 94.0
WERAM-Asn-0013 CADANIAP00002934 Aspergillus nidulans 31 4e-19 93.6
WERAM-Aso-0017 CADAORAP00002263 Aspergillus oryzae 31 4e-19 93.2
WERAM-Leo-0156 ENSLOCP00000018785.1 Lepisosteus oculatus 34 6e-19 92.8
WERAM-Ptv-0186 ENSPVAP00000016701.1 Pteropus vampyrus 34 1e-18 91.7
WERAM-Ten-0144 ENSTNIP00000015099.1 Tetraodon nigroviridis 34 2e-18 91.3
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 29 2e-18 90.9
WERAM-Orm-0103 OMERI12G03020.1 Oryza meridionalis 25 5e-18 89.7
WERAM-Zyt-0001 Mycgr3P100618 Zymoseptoria tritici 32 6e-18 89.7
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 25 7e-18 89.4
WERAM-Asm-0153 ENSAMXP00000015326.1 Astyanax mexicanus 31 7e-18 89.4
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 25 8e-18 89.0
WERAM-Scp-0042 SPCC132.02.1:pep Schizosaccharomyces pombe 28 9e-18 89.0
WERAM-Scj-0005 EEB06048 Schizosaccharomyces japonicus 32 9e-18 89.0
WERAM-Orla-0002 ENSORLP00000000105.1 Oryzias latipes 33 1e-17 89.0
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 28 1e-17 88.6
WERAM-Cii-0054 ENSCINP00000012226.3 Ciona intestinalis 31 1e-17 88.6
WERAM-Nol-0170 ENSNLEP00000018956.1 Nomascus leucogenys 35 1e-17 88.2
WERAM-Dan-0202 ENSDNOP00000027446.1 Dasypus novemcinctus 34 2e-17 87.8
WERAM-Cae-0022 R11A8.4a Caenorhabditis elegans 28 2e-17 87.8
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 29 3e-17 87.0
WERAM-Asni-0009 CADANGAP00002892 Aspergillus niger 31 3e-17 87.0
WERAM-Asg-0028 AAS54472 Ashbya gossypii 29 4e-17 86.7
WERAM-Dar-0028 ENSDARP00000003412.6 Danio rerio 30 5e-17 86.7
WERAM-Tub-0067 ENSTBEP00000008310.1 Tupaia belangeri 33 6e-17 86.3
WERAM-Asf-0024 CADAFLAP00010064 Aspergillus flavus 30 6e-17 86.3
WERAM-Coi-0005 EAS35645 Coccidioides immitis 30 6e-17 86.3
WERAM-Anc-0180 ENSACAP00000017235.2 Anolis carolinensis 31 8e-17 85.9
WERAM-Orc-0113 ENSOCUP00000009744.3 Oryctolagus cuniculus 28 8e-17 85.9
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 27 1e-16 85.1
WERAM-Nec-0006 EFNCRP00000000764 Neurospora crassa 31 2e-16 84.7
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 29 3e-16 84.0
WERAM-Pem-0044 ENSPMAP00000005386.1 Petromyzon marinus 28 3e-16 84.0
WERAM-Yal-0031 CAG78100 Yarrowia lipolytica 31 4e-16 83.6
WERAM-Crn-0031 AAW44797 Cryptococcus neoformans 31 6e-16 83.2
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 27 6e-16 82.8
WERAM-Tag-0120 ENSTGUP00000009802.1 Taeniopygia guttata 27 6e-16 82.8
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 30 8e-16 82.4
Created Date 25-Jun-2016