WERAM Information

Tag Content
WERAM ID WERAM-Brr-0144
Ensembl Protein ID Bra028961.1-P
Gene Name SRT1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra028961 Bra028961.1 Bra028961.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 9.60e-68 229.3 36 268
Organism Brassica rapa
Domain Profile
  HDAC SIR2
       SIR2.txt   2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkvfyalakelyplgsakPtktHyflaelekkgkllr 97 
                    +lak+++ksk++vv+tGAGiSts+GIPDFR+++G+++  +++     +++                 k+ +p+++a P++tH++l ele++g l++
  Bra028961.1-P  36 ELAKMIQKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREG-----KDLP----------------KASLPFHRAMPSMTHMALVELERAGILKF 110
                    799**********************************96666.....3333................3346777899******************* PP
       SIR2.txt  98 lytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkakekvpkCek..Ckgvlkpdivffgenlpeefleeveedlkeadlll 191
                    +++QN+DgL++++g++++kl+elHG+ ++++C +C++e+ r++ +e++  ke+ +kC++  C+++lk++++ ++++lp ++++ +e+++k adl+l
  Bra028961.1-P 111 VISQNVDGLHLRSGIPREKLSELHGDSFMEMCPSCGAEYLRDFEVETIGLKETSRKCSNakCGAKLKDTVLDWEDALPPKEIDPAEKHCKMADLVL 206
                    *********************************************************9888*********************************** PP
       SIR2.txt 192 vlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevveellkllglee 253
                    +lGtSl+++p+++l++k+ + + ++++vnl+++++dk+ad++++g +d+vv+ ++++l++++
  Bra028961.1-P 207 CLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKADVVIHGFVDKVVAGVMETLNMQI 268
                    ********************************************************999875 PP
Protein Sequence
(Fasta)		MSLGYAEKLS FIEDVGQVGM AEFFDSSHVL QCKIEELAKM IQKSKHLVVF TGAGISTSCG 60
IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV ELERAGILKF VISQNVDGLH 120
LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSNA KCGAKLKDTV 180
LDWEDALPPK EIDPAEKHCK MADLVLCLGT SLQITPACNL PLKCLRGGGK IVIVNLQKTP 240
KDKKADVVIH GFVDKVVAGV METLNMQIPP YVRIDLFQII LNQSLSRDER YINWTLRVAS 300
VHGLTSQLPF IESVEVSFSD NHNFKDAVLD EQPFIIKRRT TETETFDIFL KINYSEGCDC 360
LSTKITIPFK YEVSTEEHEE ETIDKEAVLQ SLREKAVEES SCGQSGVVER RFVSEPRSET 420
IVYATVTNLR TFHCQQSVLA NGDLKWKMEG SGTTSRKRSR TGKRKPRA 468
Nucleotide Sequence
(Fasta)		ATGTCTTTAG GCTACGCAGA GAAACTATCT TTCATCGAAG ATGTTGGTCA AGTGGGCATG 60
GCTGAATTCT TCGACTCATC TCATGTTCTG CAATGCAAGA TTGAAGAACT TGCTAAGATG 120
ATTCAAAAGA GTAAGCATCT AGTGGTGTTT ACAGGTGCAG GCATCTCAAC TTCTTGTGGT 180
ATTCCTGATT TCAGAGGCCC CAAAGGCATT TGGACATTGC AGCGCGAGGG CAAAGATTTA 240
CCGAAAGCAT CTCTGCCGTT TCATCGTGCA ATGCCGAGCA TGACTCATAT GGCTTTGGTT 300
GAATTAGAAA GAGCTGGCAT TTTAAAGTTT GTCATCAGTC AGAATGTGGA CGGCTTGCAT 360
CTTCGATCTG GGATACCAAG AGAGAAGCTC TCTGAACTGC ATGGAGACTC TTTTATGGAG 420
ATGTGCCCAT CATGTGGAGC TGAGTACCTG CGTGATTTTG AGGTGGAAAC TATTGGATTA 480
AAAGAGACCT CGAGAAAGTG CTCTAATGCA AAGTGTGGTG CTAAACTCAA AGATACGGTC 540
TTAGATTGGG AGGATGCTTT GCCTCCAAAA GAGATTGATC CTGCAGAGAA ACATTGCAAA 600
ATGGCTGATC TTGTACTATG TTTGGGTACC AGTTTGCAGA TAACCCCTGC TTGCAACTTG 660
CCTCTCAAGT GTCTCAGGGG TGGAGGCAAG ATCGTCATTG TTAATCTTCA GAAAACCCCA 720
AAGGACAAGA AAGCAGACGT AGTGATTCAC GGTTTTGTTG ATAAGGTGGT TGCAGGGGTC 780
ATGGAAACTC TCAACATGCA GATTCCCCCA TATGTCAGAA TAGATCTTTT CCAGATAATA 840
CTAAACCAAT CCTTGAGCAG AGATGAGAGG TACATTAACT GGACACTTCG TGTTGCAAGT 900
GTTCATGGAT TAACTTCTCA GCTACCATTC ATTGAATCAG TTGAGGTCTC CTTCTCAGAC 960
AACCATAACT TCAAAGATGC AGTTCTCGAT GAGCAGCCGT TTATCATAAA AAGGAGAACA 1020
ACGGAAACCG AGACATTTGA CATATTCTTG AAAATCAACT ACAGTGAGGG TTGTGACTGT 1080
CTCTCCACCA AAATTACCAT TCCCTTCAAA TATGAGGTTT CAACGGAAGA GCATGAGGAG 1140
GAGACTATTG ACAAGGAGGC TGTGCTGCAA AGCCTGAGAG AGAAAGCAGT TGAAGAGTCC 1200
AGCTGCGGGC AAAGCGGTGT GGTCGAGAGA AGATTTGTTT CTGAGCCGAG AAGTGAAACC 1260
ATTGTGTATG CAACTGTGAC CAATCTCAGG ACGTTCCATT GTCAACAATC TGTGCTTGCT 1320
AATGGAGACC TCAAATGGAA GATGGAAGGT TCTGGAACAA CGTCTCGTAA ACGTTCTAGA 1380
ACCGGGAAAC GAAAGCCAAG GGCATAG 1408
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0046 Bo3g021360.1 Brassica oleracea 99 0.0 890
WERAM-Arl-0111 fgenesh2_kg.8__ 1477__ AT5G55760.1 Arabidopsis lyrata 89 0.0 827
WERAM-Art-0143 AT5G55760.1 Arabidopsis thaliana 88 0.0 823
WERAM-Pot-0016 POPTR_0001s37680.1 Populus trichocarpa 72 0.0 679
WERAM-Glm-0232 GLYMA18G08450.1 Glycine max 71 0.0 664
WERAM-Met-0085 KEH34091 Medicago truncatula 71 0.0 660
WERAM-Sol-0101 Solyc07g065550.2.1 Solanum lycopersicum 69 0.0 648
WERAM-Prp-0059 EMJ12601 Prunus persica 72 0.0 647
WERAM-Viv-0122 VIT_19s0015g00570.t01 Vitis vinifera 71 0.0 640
WERAM-Sot-0070 PGSC0003DMT400057382 Solanum tuberosum 68 2e-171 599
WERAM-Amt-0008 ERN05726 Amborella trichopoda 66 3e-166 582
WERAM-Mua-0125 GSMUA_Achr8P24470_001 Musa acuminata 65 1e-161 566
WERAM-Sob-0090 Sb06g020390.1 Sorghum bicolor 60 1e-156 550
WERAM-Orbr-0051 OB04G14570.1 Oryza brachyantha 61 1e-155 547
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 60 1e-153 540
WERAM-Tra-0045 Traes_2AS_69329D634.2 Triticum aestivum 60 3e-153 538
WERAM-Ors-0038 OS04T0271000-01 Oryza sativa 60 7e-153 538
WERAM-Ori-0050 BGIOSGA015454-PA Oryza indica 60 1e-151 533
WERAM-Brd-0122 BRADI5G02940.2 Brachypodium distachyon 60 2e-150 529
WERAM-Aet-0057 EMT21754 Aegilops tauschii 54 1e-135 480
WERAM-Php-0065 PP1S272_33V6.1 Physcomitrella patens 53 1e-131 467
WERAM-Sei-0037 Si010693m Setaria italica 74 1e-128 457
WERAM-Zem-0044 GRMZM2G058573_P01 Zea mays 75 2e-118 422
WERAM-Lep-0045 LPERR04G03890.1 Leersia perrieri 75 2e-117 420
WERAM-Orl-0053 KN539062.1_FGP005 Oryza longistaminata 53 4e-116 415
WERAM-Xet-0167 ENSXETP00000057383.2 Xenopus tropicalis 52 6e-82 301
WERAM-Sah-0106 ENSSHAP00000011597.1 Sarcophilus harrisii 54 7e-82 301
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 53 2e-81 300
WERAM-Ran-0038 ENSRNOP00000008758.3 Rattus norvegicus 52 3e-80 296
WERAM-Lac-0065 ENSLACP00000008822.2 Latimeria chalumnae 52 2e-79 294
WERAM-Pof-0157 ENSPFOP00000012793.2 Poecilia formosa 53 2e-79 293
WERAM-Mam-0185 ENSMMUP00000026241.2 Macaca mulatta 51 5e-79 292
WERAM-Xim-0231 ENSXMAP00000019352.1 Xiphophorus maculatus 52 5e-79 292
WERAM-Ict-0164 ENSSTOP00000015068.1 Ictidomys tridecemlineatus 51 7e-79 291
WERAM-Otg-0026 ENSOGAP00000001481.2 Otolemur garnettii 51 8e-79 291
WERAM-Soa-0094 ENSSARP00000008710.1 Sorex araneus 51 2e-78 290
WERAM-Paa-0028 ENSPANP00000011086.1 Papio anubis 51 2e-78 290
WERAM-Pat-0085 ENSPTRP00000017501.2 Pan troglodytes 51 3e-78 290
WERAM-Gog-0100 ENSGGOP00000008641.2 Gorilla gorilla 51 3e-78 290
WERAM-Mum-0135 ENSMUSP00000048971.8 Mus musculus 52 3e-78 289
WERAM-Meg-0032 ENSMGAP00000002578.1 Meleagris gallopavo 47 3e-78 289
WERAM-Hos-0033 ENSP00000337332.1 Homo sapiens 51 4e-78 289
WERAM-Mup-0054 ENSMPUP00000004703.1 Mustela putorius furo 51 5e-78 289
WERAM-Poa-0078 ENSPPYP00000010537.2 Pongo abelii 51 6e-78 288
WERAM-Chs-0131 ENSCSAP00000006979.1 Chlorocebus sabaeus 51 7e-78 288
WERAM-Caj-0156 ENSCJAP00000027893.2 Callithrix jacchus 51 7e-78 288
WERAM-Tar-0090 ENSTRUP00000017073.1 Takifugu rubripes 52 7e-78 288
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 52 7e-78 288
WERAM-Gaga-0011 ENSGALP00000001888.3 Gallus gallus 47 9e-78 288
WERAM-Gaa-0163 ENSGACP00000020196.1 Gasterosteus aculeatus 53 1e-77 287
WERAM-Caf-0197 ENSCAFP00000028217.2 Canis familiaris 51 1e-77 287
WERAM-Orn-0127 ENSONIP00000012860.1 Oreochromis niloticus 52 3e-77 286
WERAM-Aim-0033 ENSAMEP00000002298.1 Ailuropoda melanoleuca 51 4e-77 286
WERAM-Loa-0191 ENSLAFP00000023357.1 Loxodonta africana 51 1e-76 284
WERAM-Bot-0171 ENSBTAP00000026521.5 Bos taurus 51 2e-76 283
WERAM-Cis-0072 ENSCSAVP00000015450.1 Ciona savignyi 47 9e-75 278
WERAM-Ova-0116 ENSOARP00000011370.1 Ovis aries 49 7e-74 275
WERAM-Fia-0011 ENSFALP00000000954.1 Ficedula albicollis 52 8e-74 275
WERAM-Pes-0079 ENSPSIP00000009554.1 Pelodiscus sinensis 52 7e-73 271
WERAM-Sus-0098 ENSSSCP00000014344.2 Sus scrofa 49 9e-73 271
WERAM-Gam-0126 ENSGMOP00000013105.1 Gadus morhua 50 1e-72 271
WERAM-Myl-0098 ENSMLUP00000007946.2 Myotis lucifugus 52 6e-72 268
WERAM-Drm-0064 FBpp0293897 Drosophila melanogaster 43 8e-69 258
WERAM-Eqc-0160 ENSECAP00000016959.1 Equus caballus 41 6e-49 192
WERAM-Anp-0140 ENSAPLP00000015159.1 Anas platyrhynchos 41 1e-47 188
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 33 6e-25 112
WERAM-Ast-0001 CADATEAP00000292 Aspergillus terreus 30 3e-23 107
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 29 4e-23 106
WERAM-Scs-0014 EDN99996 Sclerotinia sclerotiorum 33 2e-21 101
WERAM-Sem-0060 EFJ23112 Selaginella moellendorffii 30 2e-21 101
WERAM-Asn-0013 CADANIAP00002934 Aspergillus nidulans 31 2e-21 100
WERAM-Thc-0008 EOX92647 Theobroma cacao 26 3e-21 100
WERAM-Asc-0026 CADACLAP00005809 Aspergillus clavatus 34 5e-21 99.8
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 32 9e-21 99.0
WERAM-Trr-0018 EGR46788 Trichoderma reesei 29 1e-20 99.0
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 31 1e-20 98.6
WERAM-Fuo-0021 FOXG_06023P0 Fusarium oxysporum 31 2e-20 98.2
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 28 1e-19 95.1
WERAM-Pyt-0039 EFQ86136 Pyrenophora teres 31 3e-19 94.0
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 30 6e-19 93.2
WERAM-Lem-0007 CBY02082 Leptosphaeria maculans 31 6e-19 92.8
WERAM-Aso-0017 CADAORAP00002263 Aspergillus oryzae 29 6e-19 92.8
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 32 6e-19 92.8
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 29 9e-19 92.4
WERAM-Dan-0168 ENSDNOP00000020521.1 Dasypus novemcinctus 28 1e-18 92.0
WERAM-Trv-0012 EHK19002 Trichoderma virens 29 1e-18 92.0
WERAM-Orla-0002 ENSORLP00000000105.1 Oryzias latipes 32 2e-18 91.3
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 29 2e-18 90.9
WERAM-Leo-0013 ENSLOCP00000002849.1 Lepisosteus oculatus 30 3e-18 90.9
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 29 7e-18 89.4
WERAM-Asf-0024 CADAFLAP00010064 Aspergillus flavus 31 1e-17 89.0
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 29 1e-17 89.0
WERAM-Cae-0022 R11A8.4a Caenorhabditis elegans 26 1e-17 88.6
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 26 1e-17 88.6
WERAM-Asni-0009 CADANGAP00002892 Aspergillus niger 31 2e-17 88.2
WERAM-Scp-0042 SPCC132.02.1:pep Schizosaccharomyces pombe 30 2e-17 87.8
WERAM-Asm-0153 ENSAMXP00000015326.1 Astyanax mexicanus 31 3e-17 87.4
WERAM-Yal-0031 CAG78100 Yarrowia lipolytica 30 3e-17 87.4
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 28 3e-17 87.4
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 24 3e-17 87.0
WERAM-Pytr-0009 EDU41553 Pyrenophora triticirepentis 31 4e-17 87.0
WERAM-Mao-0029 MGG_10267T0 Magnaporthe oryzae 29 4e-17 86.7
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 27 5e-17 86.7
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 24 6e-17 86.3
WERAM-Scj-0005 EEB06048 Schizosaccharomyces japonicus 32 6e-17 86.3
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 24 6e-17 86.3
WERAM-Osl-0012 ABO98065 Ostreococcus lucimarinus 30 1e-16 85.1
WERAM-Zyt-0001 Mycgr3P100618 Zymoseptoria tritici 30 1e-16 85.1
WERAM-Kop-0003 CAY67751 Komagataella pastoris 28 2e-16 84.7
WERAM-Nol-0008 ENSNLEP00000001018.1 Nomascus leucogenys 27 2e-16 84.7
WERAM-Asg-0028 AAS54472 Ashbya gossypii 30 2e-16 84.7
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 28 2e-16 84.3
WERAM-Nec-0006 EFNCRP00000000764 Neurospora crassa 31 3e-16 84.0
WERAM-Tag-0095 ENSTGUP00000006303.1 Taeniopygia guttata 27 4e-16 83.6
WERAM-Orc-0069 ENSOCUP00000006265.2 Oryctolagus cuniculus 27 7e-16 82.8
WERAM-Tub-0067 ENSTBEP00000008310.1 Tupaia belangeri 31 1e-15 82.4
WERAM-Cii-0054 ENSCINP00000012226.3 Ciona intestinalis 30 2e-15 81.3
Created Date 25-Jun-2016