WERAM Information

Tag Content
WERAM ID WERAM-Sot-0057
Ensembl Protein ID PGSC0003DMT400049364
Gene Name PGSC0003DMG400019178
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400019178 PGSC0003DMT400049364 PGSC0003DMT400049364
PGSC0003DMG400019178 PGSC0003DMT400049365 PGSC0003DMT400049365
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.20e-12 48.4 184 233
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                           t+C  Cg ++  +++++ Cd C++wfH+kCvk++  ++++ k++ CpsC 
  PGSC0003DMT400049364 184 TLCGSCGGNYSADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS 233
                           78****999999999*******************555554489******6 PP
Protein Sequence
(Fasta)		MSSISSNPKT VEEIFKDYSS RRSGVVRALT HDVDEFYNLC DPEKENLCLY GHPNETWEVN 60
LPAEEVPPEL PEPALGINFA RDGMNRRDWL SLVAVHSDCW LLSVAFFFGT RLNQNERKRL 120
FSMINELPTA FEIVAERKHV KEKPTADSGS KSRGSTKKSS DSQAKGTPKL ADESYPEEEE 180
HGETLCGSCG GNYSADEFWI GCDICERWFH GKCVKITPAK AESIKQYKCP SCSLKRSRVQ 240
Nucleotide Sequence
(Fasta)		CCAAATTCAA TTTAATCTTT TCTCTCTCAT TAATATAAAT CTGTATTTAA AGATCAGTTT 60
TTCTCTGATC TTCTTTTTAC CTTTGCTGAA GATCTCAGCA TATTTTTTTT TTTGTATTTT 120
TTGAAAAAAA TGTCATCTAT TTCTTCAAAT CCGAAAACTG TAGAAGAGAT CTTCAAAGAT 180
TATAGCTCTC GTCGTTCTGG AGTAGTTCGA GCTTTAACAC ATGATGTGGA TGAATTCTAT 240
AATCTATGCG ATCCAGAGAA AGAAAATTTG TGCCTATATG GACATCCCAA TGAGACCTGG 300
GAAGTCAACC TTCCTGCTGA AGAAGTCCCA CCTGAGCTAC CAGAGCCAGC ACTAGGGATA 360
AATTTTGCGA GGGATGGGAT GAATCGGAGA GATTGGCTTT CATTGGTTGC TGTGCACAGT 420
GATTGTTGGT TGCTTTCTGT GGCATTCTTT TTTGGAACTC GTCTTAACCA AAATGAAAGG 480
AAGCGTCTAT TCAGCATGAT CAATGAACTT CCAACGGCTT TTGAAATTGT GGCAGAAAGA 540
AAGCATGTAA AAGAGAAGCC CACTGCTGAT AGTGGAAGCA AATCTCGTGG TAGTACAAAG 600
AAATCTAGTG ATAGTCAGGC CAAAGGCACA CCAAAGCTTG CAGATGAAAG TTACCCGGAG 660
GAAGAAGAAC ATGGTGAGAC ACTATGTGGC AGCTGTGGTG GGAATTATAG TGCTGATGAA 720
TTTTGGATTG GCTGCGACAT CTGTGAGAGG TGGTTCCATG GGAAGTGTGT TAAGATAACA 780
CCTGCTAAAG CTGAGAGTAT AAAGCAATAT AAATGCCCGT CGTGCAGCTT GAAGCGTAGC 840
AGAGTACAGT AGCTATTTCA TGAGGGCCAT AAGTGCTGTT GCTCTGACCC ATTAACAGAA 900
TAGTATAGCA ATCTTACATT TGTGATTGAT ATTCTATTGT GATGTTTCCT TACATGACTC 960
TTGGGAAGGA AATATAATTT TACTTTCTTC TGTTAATCCA TGTTTGGATG TTATTAGCCC 1020
CATATATAGA AAAACTCTTT TAAGTTATTG TAAAGGTTCC TATACTGTAT GGTTTTGTAG 1080
TTGAATAAAC TAATTGATGC TTTTGGATTT TTGAAAAATG GTGTGTTAGC TAAATGCTGT 1140
TGGGATCTTC ATAAGACAGA CTGGGAAGAG CTCAGAGGCT ATGCAAGCAT GGTTCAAGGG 1200
CCCTGGATTG GGATGGGACA TTACACTGCT GTTTTGTGCA AGGAGGATAG AATTGCTGGA 1260
TCACCTGTCC CAAGATAATG AGTCTCCCAG ACGGGCAAAC GTTTTGAAGC CTCTCAAGAT 1320
AATGTGTCTC TCAAATGAGC AAACGTTCTG AAGCCTCTCA AGATAATGTG TCTACCAAAC 1380
GGGCAAGTGT TTTGAAGCCT CCCAAGATAA TGTGTCTCCC AAACGGGCAA ACCTTATTGT 1440
TGTCTGCTTA TGATTAAAAA GATTCTAAAA AATAAAATTA GTGTCTTTTT CTAGATTTCA 1500
AACATTGCAT TAACCAATCA TTGTATTGAA ATAAAAC 1538
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 99 3e-118 421
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 83 2e-98 355
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 82 2e-94 342
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 80 7e-94 340
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 80 1e-93 339
WERAM-Prp-0085 EMJ19499 Prunus persica 79 9e-92 333
WERAM-Thc-0059 EOY07191 Theobroma cacao 80 3e-91 331
WERAM-Amt-0010 ERN05231 Amborella trichopoda 77 2e-90 328
WERAM-Met-0092 KEH28874 Medicago truncatula 81 5e-90 327
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 75 2e-84 308
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 73 2e-84 308
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 75 2e-84 308
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 71 7e-83 303
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 71 7e-82 300
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 70 1e-81 299
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 71 2e-81 299
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 71 2e-81 299
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 71 2e-81 299
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 71 2e-81 299
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 71 4e-81 298
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 71 4e-81 298
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 71 4e-81 298
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 68 2e-80 296
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 71 2e-80 296
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 69 5e-80 294
WERAM-Zem-0157 GRMZM5G893976_P01 Zea mays 65 4e-79 291
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 64 8e-79 290
WERAM-Sei-0134 Si037171m Setaria italica 65 6e-77 284
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 8e-77 283
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 71 2e-76 282
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 64 3e-74 275
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 62 5e-74 274
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 62 8e-74 273
WERAM-Aet-0099 EMT23706 Aegilops tauschii 55 1e-68 256
Created Date 25-Jun-2016