Tag |
Content |
WERAM ID |
WERAM-Org-0043 |
Ensembl Protein ID |
ORGLA04G0042700.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
SIR2 |
4.00e-62 |
210.6 |
36 |
266 |
|
Organism |
Oryza glaberrima |
Domain Profile |
HDAC SIR2
SIR2.txt 2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkvfyalakelyplgsakPtktHyflaelekkg 93 +la ++++sk++vv+tGAGiSts+GIPDFR+++G+++ +++ + + + +p+++a Pt tH++l elek g ORGLA04G0042700.1 36 ELAVMVRESKHLVVFTGAGISTSSGIPDFRGPKGVWTLQRSG-----KGVPGAS----------------LPFHRAVPTLTHMALVELEKTG 106 6788999******************************97766.....3333333................5667899*************** PP SIR2.txt 94 kllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkakekvpkCek..Ckgvlkpdivffgenlpeefleeveed 183 +l+++++QN+D L++++gl+++kl elHG+ +++ C +Ckke+ r++ e++ k++ ++C++ C++ lk++++ ++++lp e++++++e+ ORGLA04G0042700.1 107 RLKFVISQNVDSLHLRSGLPREKLAELHGNSFKEICPSCKKEYLRDFEIETIGLKDTPRRCSDknCGARLKDTVLDWEDALPPEEMDAAKEQ 198 *******************************************************9999**9888*************************** PP SIR2.txt 184 lkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevveellkllgl 251 +++adl+l+lGtSl+++p++++++ k++ +v++vnl+ +++dk+a+l+++g +d+v++ ++ ++l ORGLA04G0042700.1 199 CQTADLVLCLGTSLQITPACNMPLLSLKNGGRVAIVNLQATPKDKKASLVIHGFVDKVIAGVMYMMNL 266 ***********************************************************999887765 PP
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Protein Sequence (Fasta) | MSLGYAEKLS YREDVGNVGM PEIFDSPELL HKKIEELAVM VRESKHLVVF TGAGISTSSG 60 IPDFRGPKGV WTLQRSGKGV PGASLPFHRA VPTLTHMALV ELEKTGRLKF VISQNVDSLH 120 LRSGLPREKL AELHGNSFKE ICPSCKKEYL RDFEIETIGL KDTPRRCSDK NCGARLKDTV 180 LDWEDALPPE EMDAAKEQCQ TADLVLCLGT SLQITPACNM PLLSLKNGGR VAIVNLQATP 240 KDKKASLVIH GFVDKVIAGV MYMMNLRIPP YIRTDFVQIS LRNSVKKKCV RWTLRVTSIH 300 GLRAPLPFLR SVEVSFPERP DMKPVVLKEQ PFSLQRETSM NRPFVMLLTF NFSDGCGCSS 360 SSIEWPVDFL KQKDSFVRDR SLVLQELQHA AEHRSRAGQH AILEREGVPR AETSIHALVT 420 NIVRYDTEDS KAAVPMATWM NSNGSLSKRH MDAIGCNPAS SKKQKLVATR HRRKGLNPAT 480 QKV 483Protein Fasta Sequence
>ORGLA04G0042700.1|SIR2|Oryza glaberrima MSLGYAEKLSYREDVGNVGMPEIFDSPELLHKKIEELAVMVRESKHLVVFTGAGISTSSGIPDFRGPKGVWTLQRSGKGVPGASLPFHRAVPTLTHMALVELEKTGRLKFVISQNVDSLHLRSGLPREKLAELHGNSFKEICPSCKKEYLRDFEIETIGLKDTPRRCSDKNCGARLKDTVLDWEDALPPEEMDAAKEQCQTADLVLCLGTSLQITPACNMPLLSLKNGGRVAIVNLQATPKDKKASLVIHGFVDKVIAGVMYMMNLRIPPYIRTDFVQISLRNSVKKKCVRWTLRVTSIHGLRAPLPFLRSVEVSFPERPDMKPVVLKEQPFSLQRETSMNRPFVMLLTFNFSDGCGCSSSSIEWPVDFLKQKDSFVRDRSLVLQELQHAAEHRSRAGQHAILEREGVPRAETSIHALVTNIVRYDTEDSKAAVPMATWMNSNGSLSKRHMDAIGCNPASSKKQKLVATRHRRKGLNPATQKV
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Nucleotide Sequence (Fasta) | ATGTCACTTG GCTATGCCGA GAAGCTATCC TACCGAGAGG ATGTGGGAAA TGTCGGCATG 60 CCTGAGATCT TCGACTCTCC TGAACTCCTC CACAAGAAGA TAGAAGAGCT TGCAGTCATG 120 GTGCGAGAGA GTAAGCATTT GGTGGTGTTT ACTGGAGCAG GCATATCAAC TTCATCAGGC 180 ATACCTGACT TCCGAGGGCC CAAAGGCGTG TGGACACTGC AGCGTTCAGG AAAAGGTGTT 240 CCTGGTGCAT CACTGCCGTT TCACCGAGCT GTTCCAACCT TGACTCATAT GGCACTGGTT 300 GAATTGGAAA AAACAGGACG ATTAAAGTTT GTCATAAGCC AGAATGTTGA TAGCTTACAT 360 CTCCGCTCTG GCCTCCCAAG GGAGAAGCTG GCTGAATTGC ATGGAAATTC TTTCAAGGAG 420 ATCTGCCCAA GCTGTAAAAA GGAGTACCTT CGTGATTTTG AAATTGAGAC GATAGGACTG 480 AAGGATACTC CAAGGCGTTG TTCTGATAAG AACTGTGGAG CTAGATTAAA AGACACAGTT 540 CTTGATTGGG AGGATGCTTT ACCCCCTGAG GAGATGGATG CTGCCAAGGA GCAGTGTCAA 600 ACAGCTGATC TTGTCCTATG TTTAGGAACT AGTCTGCAGA TTACTCCTGC TTGTAATATG 660 CCTCTGTTGT CACTGAAGAA TGGGGGGAGG GTGGCTATTG TAAATCTTCA GGCAACTCCG 720 AAGGATAAAA AGGCAAGCCT TGTCATTCAT GGATTTGTGG ATAAGGTCAT TGCTGGGGTT 780 ATGTATATGA TGAATCTGCG TATCCCTCCA TATATTCGTA CTGACTTTGT TCAAATTAGT 840 CTCCGGAACT CGGTCAAAAA AAAATGCGTG AGATGGACTC TCCGAGTAAC AAGCATTCAT 900 GGCTTGCGAG CACCTTTGCC ATTTCTTCGA TCAGTTGAGG TTTCCTTTCC TGAAAGACCT 960 GACATGAAGC CTGTAGTACT AAAGGAGCAA CCATTTTCTT TGCAGAGAGA AACATCAATG 1020 AATAGACCGT TTGTCATGCT ATTGACATTC AACTTTAGTG ATGGTTGCGG CTGTTCGAGC 1080 TCTTCCATTG AATGGCCTGT TGATTTTCTG AAGCAAAAAG ACAGCTTTGT CAGGGATAGA 1140 AGTCTAGTCC TGCAAGAGTT GCAACATGCT GCAGAGCATC GATCACGTGC AGGGCAGCAT 1200 GCAATTCTGG AGAGGGAGGG TGTGCCAAGA GCTGAAACGT CAATTCATGC ACTTGTGACC 1260 AACATCGTCA GGTATGATAC TGAAGATAGC AAGGCGGCAG TTCCCATGGC TACATGGATG 1320 AACAGCAACG GCAGCCTTTC GAAACGGCAT ATGGATGCCA TTGGTTGCAA CCCAGCATCG 1380 TCAAAAAAGC AGAAGTTGGT TGCTACTCGT CATCGGCGAA AGGGCTTGAA CCCTGCTACT 1440 CAGAAAGTTT GA
1453Nucleotide Fasta Sequence
>ORGLA04G0042700.1|SIR2|Oryza glaberrima ATGTCACTTGGCTATGCCGAGAAGCTATCCTACCGAGAGGATGTGGGAAATGTCGGCATGCCTGAGATCTTCGACTCTCCTGAACTCCTCCACAAGAAGATAGAAGAGCTTGCAGTCATGGTGCGAGAGAGTAAGCATTTGGTGGTGTTTACTGGAGCAGGCATATCAACTTCATCAGGCATACCTGACTTCCGAGGGCCCAAAGGCGTGTGGACACTGCAGCGTTCAGGAAAAGGTGTTCCTGGTGCATCACTGCCGTTTCACCGAGCTGTTCCAACCTTGACTCATATGGCACTGGTTGAATTGGAAAAAACAGGACGATTAAAGTTTGTCATAAGCCAGAATGTTGATAGCTTACATCTCCGCTCTGGCCTCCCAAGGGAGAAGCTGGCTGAATTGCATGGAAATTCTTTCAAGGAGATCTGCCCAAGCTGTAAAAAGGAGTACCTTCGTGATTTTGAAATTGAGACGATAGGACTGAAGGATACTCCAAGGCGTTGTTCTGATAAGAACTGTGGAGCTAGATTAAAAGACACAGTTCTTGATTGGGAGGATGCTTTACCCCCTGAGGAGATGGATGCTGCCAAGGAGCAGTGTCAAACAGCTGATCTTGTCCTATGTTTAGGAACTAGTCTGCAGATTACTCCTGCTTGTAATATGCCTCTGTTGTCACTGAAGAATGGGGGGAGGGTGGCTATTGTAAATCTTCAGGCAACTCCGAAGGATAAAAAGGCAAGCCTTGTCATTCATGGATTTGTGGATAAGGTCATTGCTGGGGTTATGTATATGATGAATCTGCGTATCCCTCCATATATTCGTACTGACTTTGTTCAAATTAGTCTCCGGAACTCGGTCAAAAAAAAATGCGTGAGATGGACTCTCCGAGTAACAAGCATTCATGGCTTGCGAGCACCTTTGCCATTTCTTCGATCAGTTGAGGTTTCCTTTCCTGAAAGACCTGACATGAAGCCTGTAGTACTAAAGGAGCAACCATTTTCTTTGCAGAGAGAAACATCAATGAATAGACCGTTTGTCATGCTATTGACATTCAACTTTAGTGATGGTTGCGGCTGTTCGAGCTCTTCCATTGAATGGCCTGTTGATTTTCTGAAGCAAAAAGACAGCTTTGTCAGGGATAGAAGTCTAGTCCTGCAAGAGTTGCAACATGCTGCAGAGCATCGATCACGTGCAGGGCAGCATGCAATTCTGGAGAGGGAGGGTGTGCCAAGAGCTGAAACGTCAATTCATGCACTTGTGACCAACATCGTCAGGTATGATACTGAAGATAGCAAGGCGGCAGTTCCCATGGCTACATGGATGAACAGCAACGGCAGCCTTTCGAAACGGCATATGGATGCCATTGGTTGCAACCCAGCATCGTCAAAAAAGCAGAAGTTGGTTGCTACTCGTCATCGGCGAAAGGGCTTGAACCCTGCTACTCAGAAAGTTTGA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |