WERAM Information

Tag Content
WERAM ID WERAM-Orm-0062
Ensembl Protein ID OMERI06G19350.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OMERI06G19350 OMERI06G19350.1 OMERI06G19350.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.40e-27 97.4 40 304
Organism Oryza meridionalis
Domain Profile
  HDAC Class-I
      class-1.txt   4 ayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv 71 
                      +y    d++ + +++ hp   +++  + +++++ g  +k ++v+p +a++e+ll +hse y++ lk++
  OMERI06G19350.1  40 VYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGHLEKNRVVEPLEATKEDLLVVHSESYLNSLKSS 107
                      56666777778889999*******9999999999999999************************9975 PP
      class-1.txt 107 GasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeff 198
                      G+s+ +ak L   e+  ain  GG+hh   +e  Gfc   Di l i+  + + + +rv+ id+d h G+g e+ f +  rv t+ +  y+ + +
  OMERI06G19350.1 117 GGSILSAK-LA-LERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQfAFVRlNISRVMIIDLDAHQGNGHEKDFANDGRVYTLDM--YNAGIY 206
                      66665443.32.345689****************************834455599****************************876..666557 PP
      class-1.txt 199 PgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh....aecvkfvksfnlpl 288
                      P         +   +y    + l  g + e y   + + ++   ++f+P+ +v + G+D l gD+lg  ++s +g      ++ +f k+ n+pl
  OMERI06G19350.1 207 PY-------DHVAKRYIDQKIELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVvirdEKVFRFAKDQNIPL 293
                      74.......34455788888******************************************************9733334799********** PP
      class-1.txt 289 lvlGGGGYtlr 299
                      l+l  GGY + 
  OMERI06G19350.1 294 LMLTSGGYMKS 304
                      ********764 PP
Protein Sequence
(Fasta)		MASSASSAAA AATPPEPLRR DRILSSKLYL DVPGSKAPVV YSPAYDIAFL GIEKLHPFDS 60
SKWGRICKFL TKEGHLEKNR VVEPLEATKE DLLVVHSESY LNSLKSSLKV ASIVEVGGSI 120
LSAKLALERG WAINVGGGFH HCSAEEGGGF CAYADISLCI QFAFVRLNIS RVMIIDLDAH 180
QGNGHEKDFA NDGRVYTLDM YNAGIYPYDH VAKRYIDQKI ELVSGTKTED YLDQLDKALK 240
VAESRFQPQL IVYNAGTDIL DGDPLGRLKI SPQGVVIRDE KVFRFAKDQN IPLLMLTSGG 300
YMKSSARVIA DSIINLSNKN LIELGSQLG 329
Nucleotide Sequence
(Fasta)		GCAAAATATC ACACGTACTA CAGGATGAAA AATGCAATTA TGCAAATTAG CAAGTAGTGC 60
ATCGCAAATA TCACATCACC GAATTCTCCC GAGCTCCGGC GACCATTCCT CTTCTCGGCG 120
GCAGCCTCGC CGCCGTCCTC CGCCGCCCCT CTCGCGGCGC AGCGATTCGT CTCCCTCCTC 180
CGCAACCGCG CCCGAGCTCC CCCTCCTCCC CGCATCCGGT GGATGGCCTC TTCCGCCTCG 240
TCCGCCGCGG CGGCGGCGAC CCCGCCGGAG CCCCTCCGCC GCGACCGCAT CCTCTCCAGC 300
AAGCTCTACC TCGACGTCCC GGGCTCCAAG GCTCCGGTGG TGTACTCGCC GGCGTACGAC 360
ATCGCCTTCC TCGGAATCGA GAAGCTGCAC CCGTTCGACT CCTCCAAATG GGGCCGCATA 420
TGCAAGTTCC TCACCAAGGA AGGGCACCTG GAGAAGAACC GAGTGGTGGA GCCATTGGAA 480
GCGACTAAGG AGGATTTGCT TGTGGTGCAC TCGGAGTCGT ACTTGAACAG CCTCAAGAGC 540
AGCCTGAAGG TTGCGTCCAT TGTAGAGGTG GGTGGGTCGA TTCTATCGGC CAAGCTTGCA 600
CTTGAGAGAG GATGGGCCAT TAATGTTGGT GGAGGGTTTC ACCATTGTTC GGCAGAGGAG 660
GGGGGCGGGT TTTGTGCATA TGCTGATATT TCTCTCTGCA TTCAGTTTGC TTTTGTCCGT 720
CTAAATATTT CAAGAGTGAT GATCATAGAT CTGGATGCCC ACCAAGGAAA TGGCCATGAA 780
AAGGATTTCG CTAATGATGG AAGAGTTTAC ACTTTGGATA TGTACAATGC TGGAATATAT 840
CCCTATGATC ATGTTGCTAA GCGGTATATT GATCAAAAAA TCGAGCTAGT TAGTGGGACA 900
AAGACAGAAG ACTACTTGGA TCAACTTGAC AAGGCTCTTA AGGTTGCAGA AAGTAGATTT 960
CAGCCTCAGT TGATTGTTTA CAATGCTGGG ACAGATATCC TGGATGGCGA TCCATTGGGA 1020
AGATTGAAAA TAAGCCCTCA GGGCGTGGTG ATCAGAGATG AGAAGGTGTT CAGGTTTGCA 1080
AAGGATCAAA ACATCCCACT ACTCATGTTA ACATCAGGAG GCTACATGAA GTCTAGCGCC 1140
CGAGTGATCG CCGACTCGAT AATCAATCTC TCGAATAAAA ACTTGATAGA GCTTGGTAGC 1200
CAGCTTGGCT GAACGAGTGC TTAACCTGAA TCGACAGATC GCAGATCTAC TGGATGTATA 1260
TATCCTGTCT ATAAGAGGCT TACACTAATG TGATAATGGT ATTAATATAA GCCACAAAAA 1320
TCGTTATCAA CTCACAGAGT CACAGTTCAC CTTGTACATA ACCCCTGACT TGATGTCCCA 1380
TTCTCAGCTA TACTGTTGGC TTAAATGGTT TTCCAGCTGG ATGCTGGCTG AAATTCCAAC 1440
TTGACTGGAC ATTGCTTGGG ATGGCATGGT TTATTTCAGA ATTTTACAAA CCTAGCTACA 1500
TGTCAGCATG TCCATTCAAG AATCAAGCGG TAGCAACTTA GCTTCCTCCT CAAGATCATC 1560
AGACTGGTCA TAGTTTTTTG AATGCATAAA AGGAGTTCTC TGAAACTTGA AGAAAGCCTA 1620
GTTTGATGCA GTTGATAATT CAAATATTCA ATTAACTAAC CTGGTATGAC GAAAAAAGAT 1680
AAAACAAAGG GAAAAAAAAA GCAACATCTG TAACCAACAG TTAATCAATA AGCTAGCTGA 1740
GTTACACTAT TTCACATACT GAATATAATG TTGCTTGAAT TTTGTTACGA ATGTTT 1797
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 92 3e-178 621
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 92 3e-178 621
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 92 3e-178 621
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 92 3e-178 621
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 92 3e-178 621
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 91 6e-178 620
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 91 1e-176 615
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 82 5e-164 574
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 83 1e-161 566
WERAM-Sei-0028 Si006784m Setaria italica 82 2e-161 565
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 84 2e-161 565
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 79 4e-157 551
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 79 6e-157 550
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 85 1e-148 523
WERAM-Aet-0055 EMT26973 Aegilops tauschii 73 1e-148 523
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 83 4e-144 508
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 72 1e-140 496
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 73 5e-139 491
WERAM-Met-0014 AES59273 Medicago truncatula 72 8e-138 487
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 70 6e-137 484
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 68 5e-136 481
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 71 6e-136 480
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 69 9e-136 480
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 69 2e-134 476
WERAM-Thc-0103 EOY29884 Theobroma cacao 69 2e-133 472
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 67 2e-132 469
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 66 5e-132 467
WERAM-Php-0013 PP1S127_95V6.1 Physcomitrella patens 64 1e-122 436
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 81 9e-119 423
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 61 4e-114 408
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 88 4e-113 405
WERAM-Prp-0064 EMJ26901 Prunus persica 70 6e-111 397
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 55 7e-100 361
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 55 2e-99 359
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 54 2e-99 359
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 53 2e-99 359
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 54 2e-99 359
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 54 2e-99 359
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 54 3e-99 358
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 54 3e-99 358
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 54 5e-99 358
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 54 5e-99 358
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 55 7e-99 357
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 54 1e-98 357
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 54 1e-98 357
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 53 1e-98 356
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 53 1e-98 356
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 53 2e-98 356
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 54 2e-98 356
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 54 2e-98 355
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 54 3e-98 355
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 53 3e-98 355
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 53 4e-98 355
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 53 4e-98 355
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 53 9e-98 353
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 53 1e-97 353
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 53 1e-97 353
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 53 2e-97 352
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 54 3e-97 352
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 53 3e-97 352
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 54 3e-97 352
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 53 1e-96 350
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 76 8e-96 347
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 52 1e-95 347
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 53 3e-95 345
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 52 5e-95 344
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 54 5e-95 344
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 53 7e-95 344
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 53 8e-95 344
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 50 1e-94 343
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 56 5e-93 338
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 51 5e-91 331
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 54 2e-90 330
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 54 2e-90 329
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 54 2e-90 329
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 50 4e-89 325
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 50 2e-86 316
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 47 2e-84 309
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 77 6e-84 308
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 47 5e-81 298
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 54 3e-80 296
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 47 3e-80 295
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 52 7e-80 294
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 48 9e-79 291
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 47 7e-77 284
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 56 6e-74 275
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 51 8e-74 274
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 43 7e-73 271
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 57 2e-69 259
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 60 4e-68 255
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 46 1e-65 247
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 37 7e-52 201
WERAM-Amt-0062 ERN16364 Amborella trichopoda 69 7e-45 178
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 45 5e-41 165
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 56 6e-41 165
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 52 1e-32 137
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 45 4e-32 135
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 30 5e-30 129
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 28 1e-27 120
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 30 8e-25 111
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 29 4e-22 102
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 27 5e-20 95.9
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 25 5e-19 92.4
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 27 1e-18 91.7
WERAM-Lab-0007 EDR12637 Laccaria bicolor 28 2e-18 90.5
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 28 3e-18 90.1
WERAM-Caa-0015 KGT70099 Candida albicans 29 6e-18 89.0
WERAM-Vip-0110 ENSVPAP00000010202.1 Vicugna pacos 25 1e-17 88.2
WERAM-Pug-0012 EFP80528 Puccinia graminis 34 2e-17 87.4
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 27 2e-17 87.4
WERAM-Put-0013 PTTG_06331P0 Puccinia triticina 34 2e-17 87.4
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 26 3e-17 86.3
WERAM-Soa-0084 ENSSARP00000008041.1 Sorex araneus 29 4e-17 86.3
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 26 5e-17 85.9
Created Date 25-Jun-2016