WERAM Information

Tag Content
WERAM ID WERAM-Orm-0015
Ensembl Protein ID OMERI01G38270.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OMERI01G38270 OMERI01G38270.1 OMERI01G38270.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 6.00e-11 65
Organism Oryza meridionalis
Domain Profile
  HDAC HD2
Query: 17  GVVIEPCNKKEIFCLEDTLYHLTSVALDEAYGLKDSNVKVFVEVNDEKFAIGTLSSKRHL 76
           GV + P N  ++   ED+L H++  +LD      +S V + V V   K  IGTLS  +  
Sbjct: 5   GVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGES-VVLSVTVGGAKLVIGTLSQDKFP 63
Query: 77  HIKVDFCFKKNFQLFHTSLISKVAFCGYQVKNLGK--FTDSEGDESDEEVP 125
            I  D  F K F+L H+   + V F GY+  N+ +  FT S+ ++  E VP
Sbjct: 64  QISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVP 114
Protein Sequence
(Fasta)		MPDMITPWKK KAPRHPGVVI EPCNKKEIFC LEDTLYHLTS VALDEAYGLK DSNVKVFVEV 60
NDEKFAIGTL SSKRHLHIKV DFCFKKNFQL FHTSLISKVA FCGYQVKNLG KFTDSEGDES 120
DEEVPPGIRL YPKSDDNMIK EAQKTGKLPA KSAAVAFAMQ KAFVKEIEHY EKSKADDDNS 180
ERYSDSSVIG ESIGDEDSSD DADDEDEGES SDEETPAKNT KEENEPVVTP LKTFPHEMAK 240
IEAPIMDNKT GTNTSKRGSH LQVANPHPAK QAKRTPIKND TPKRSASYVC NSCKKTFNSS 300
GALKDHSKAK HPATN 315
Nucleotide Sequence
(Fasta)		ATGCCGGACA TGATAACTCC TTGGAAGAAA AAGGCGCCAC GTCATCCCGG AGTGGTAATT 60
GAGCCGTGCA ATAAGAAGGA GATCTTTTGT CTTGAGGATA CCCTGTATCA TCTAACATCG 120
GTAGCCCTTG ATGAGGCTTA CGGGCTAAAA GACTCCAATG TGAAAGTATT TGTCGAAGTT 180
AATGATGAGA AGTTTGCGAT TGGGACGCTT TCCTCCAAAA GGCATCTGCA TATCAAGGTC 240
GACTTTTGTT TCAAGAAGAA CTTTCAACTA TTCCACACCT CACTAATCAG CAAAGTCGCC 300
TTTTGTGGCT ATCAAGTAAA GAATTTGGGA AAATTTACTG ATTCTGAAGG TGATGAATCT 360
GATGAGGAGG TTCCACCAGG TATTCGTCTA TACCCCAAGT CAGATGATAA TATGATCAAA 420
GAAGCACAAA AGACAGGTAA ACTTCCTGCA AAGTCTGCTG CAGTTGCATT TGCAATGCAA 480
AAGGCTTTTG TAAAGGAAAT AGAGCACTAT GAGAAATCAA AAGCTGATGA TGACAATAGT 540
GAACGATACA GTGATAGTTC AGTAATTGGT GAATCTATTG GTGATGAGGA TTCAAGTGAT 600
GATGCTGATG ATGAAGATGA AGGTGAGAGT TCTGATGAAG AGACTCCTGC AAAGAATACT 660
AAAGAGGAAA ATGAACCAGT GGTAACACCC TTGAAGACAT TTCCACATGA GATGGCAAAG 720
ATAGAAGCAC CAATTATGGA CAACAAAACT GGTACTAATA CTAGCAAGAG AGGTAGTCAT 780
CTTCAAGTTG CAAACCCTCA CCCAGCAAAA CAGGCAAAGA GGACGCCCAT AAAGAACGAC 840
ACGCCTAAGC GTTCTGCTAG CTATGTCTGC AACTCATGCA AAAAGACTTT CAACTCCTCT 900
GGTGCTCTGA AGGATCATTC AAAGGCGAAA CACCCTGCAA CCAATTGATA TGAGATAACG 960
CTAGTCTGTG TTAGATTGTT AGTGATAGGT AACTGAATTT TTTTTTCGGC TGGAGAGAGA 1020
GAATATTTTT GAAGCAGCTG TTTCCTAGCC TCATCTGAAA CAATGTTAGG ATTCGAGACG 1080
ATGGTCTCTT CAACATAATT TTGGAACACT TTCTGTGAAA AGATTCTGGA ACGTAGATAC 1140
CACAGTTTCT TTATGAATGA GTGCTGAACG GTTTCATTGT TCTGAGGAAT TGAGGTCGTA 1200
GAGTTGGATA ATAGGGCCTG AATGCTTGGG CATCACCAAT ATATATGGAC CAAGTAGTCC 1260
ATATAAGTGA GACCCACATA AGTGGTCTTT TGTTATTTCT ATTTCCACAA TGTATATAAG 1320
ATAACAATTG ACATTAAGAT GGGACCTACA CTCTAAAAAA AATTACTTCC AAATGCTATA 1380
GTTCTCTCAT GAAAGAAGCA AAAGGAGAGA GATAGTATAT TTTAATCTCT ATGGGTGGTC 1440
TTTATAGCTA TGGGTAGCTT ATCATATGGC TCTTCCTAAT GCTATCTCTC ACAATGGTAA 1500
AGGTACCCAT ATAGAGTTAT AAGAACTGCT TTTTGGCAAA TGATTTGCTA AGCAGTTATT 1560
CCAGAGTCTT AGTTAAGTAC CTTCTGCAGA CTGAATTAAT CCAGCTTAAA GTTGGTCAAC 1620
AAACTCCACA GATTAATCAC CTACATTCCC TTGCCTGCAG AGTGTTCAGC ACAATACAGT 1680
TATACTCCCT AAGCCATAAG AAATCCAGTG CCTACCCTCC ACCACATGTC ATGCTATCTT 1740
CAGCATGTTA CCCACATGCA CCTGCTTGCA ATATCTGAGA CCTGAGCCAC CACGGATCCC 1800
AAGTCCAATG CATGGGAGAA ACATACAGTT AGGAGAGAAG GGTGCAAGAT TCGACAATGC 1860
AGCAATTCTC ATACCTCAGA GCCATTGGCC TGTGCCTGCC TCCTCCTACC AATAGTGAGT 1920
TTTTCGATCT ATTTTTTTTC CTTGAGAGAT GCCCCATGGT GAGAGTTGGG AGTAGAAAAA 1980
CAGGAGCATG ATGTCCTGCA GAGAAATCAA GATTGGTCCA TGAAAGATAG AGCATTTATT 2040
CCAAGCAGGC AGAGAAGGTT CCTCCAGTTT TTAAACACCC CATGAGGGCT TCCTCCACTC 2100
ACTTTCATGT ACAGCTCACT TTCTTGGCCT CCTTCCTTTC CAGCTCGGTT TGCTAACTCA 2160
TGGTCTCCTC CTCCTACTCA TCATCATCGT CTTCTTCTTC TTCTTGCCCA ACTCCATATC 2220
TCTGCATGGC TCCATGCCTC TCCATGGCGC CTATGTATAG CCTCTCCTAG TCCTATCTCT 2280
CGTCTCATCA TCGTACACAA ACAGTAGTAC ATGATGCAGG ACTTGTTCTC GGTGCCGTCC 2340
TGCTTCTCCT CCGGCGAGAA GCTGCCGGAC ATCCCGAGCT CCGGCACGGC GGCGGCGGCG 2400
GCGGCGGCCA GGCAGAGCGC GGTGACGCTG GTCTACCGGG CGGAGATCTC CGGCCACAGC 2460
CGGCTTGTCA CCGTGACGTG GTGCAGGAAC CTGCTCACGC ACGGCCTGTC GGTGTCGATC 2520
GAAGGGTCGG CGGGCAACGG CAAGGACAAG ATCGGCAGGG AGTACGGCGA GGCCGCCGTC 2580
GCCGCCACGG ACGGCGGCGG CGGCGGCGGC GGCGGCAAGA GCTGCAGCGC CTGCAAGGTG 2640
GAGATGCAGC CGTGGCACTT CTGGCGGAAG TACGGGGCGA AGCAGTTCCA GGTGGACGGG 2700
AACGCCATCG ACGTGGTGTG GGACCTGAGG AGCGCGAGGT TCTCCGATGA GCCGGAGCCG 2760
CTGTCCGACT ACTACGTCGC GGTGGTCGCC GGCGAGGAGG TCGTCCTCCT CCTCGGCAAC 2820
CTCAAGAAGG ACGCGTTCCG GCGGACGGGG TCCCGGCCGT CGCTGCAGGA CGCGGTGCTG 2880
GTGTGCAAGA AGGAGCACGT CTTCAGCAAG AAGAGGTTCG TGACCAAGGC CAGGTTCAAC 2940
GACAGGGGGA AGCTGCACGA CATCAGCATC GAGTGCAGCA GTAGCAACCT CACCGGCGGC 3000
ATGGACGTCG ACATGGCGAT CAAGATCGAC GGCTGCGTCA ACGTCCTCGT CAGGCACCTC 3060
CAGTGGAAGT TCAGAGGCAA CGAGTGCATC TCCATCAACA AGCTCAAGGT GCAGGTGTAC 3120
TGGGACGCCC ATGACTGGCT CTTCGGCACA GGGATGAGGC ATGCTTTGTT CATCTTCAAG 3180
CCCGAGCCGC CGTCGCCGTC GCCGCCGGGA GCGAGCTCTG AATTCAGCAC CGATGAATAT 3240
TCAGATTTCT GCCTGTTTCT GTACGCATGG AAGGTTGAGT GAGCCTACAC ACTTTGTTAC 3300
TGCGATACGG CGGACGTTTT TTCTTTTACC ATGCTATGAA CTGGTAATTC AGATCATGTA 3360
ATGGATTGGA AGATAGAAGA TGAAGAGGGA AGAAATTATT GATGCCATTT TGTATTTCCT 3420
CTCCCATGGG GAGGGTGTTG GGCACATGGA AGATTGCACT GGAGGGGCAC AGGTTAGTCC 3480
TGGGAGTAGT AACAGGCTGG TCCTGATAGA GAAACATAGG GGGTGGTGAC AGGTAGGATT 3540
CACAATGGCA CTGCCTTTCC CAATCATGCA TTCATGCTTA TTTATCCAGA GAAACTCCAG 3600
CTAATGGCTG GTGGCTGGTC CCTTCTCCTA TCTAGTACTA TGCTCTGCTC CTCCTCTCTC 3660
ATTTTTCTAT TACTCATTTA CTTTGACCCT AGTTTCTTCT ACTTTCCTCA AGTAAAGGAA 3720
GAGTAGATTG GGGTGCAAAC CCCTGATAGT ACAACACTTG TATAATTCAG ATGTACTTTT 3780
GTTAAAGGCA ACTAGTCAAG GAGTGCATAC TTTTCATCAT GGTTTTCGGT AACACATTTG 3840
GACCATGTAG CTTTGGTACC ACCACAATTC CAGTTAAGAT TTCAATCATA TAATGATTAA 3900
ACATTACAAG TAATTGAAAA AAGCTGGAAG AAATGAGTTA GCATATGTCA TACAGGATGC 3960
AGGAAAAAGA AAACAGAATC CTGGAAGACA ACTGAGTTCA TAAAGTTCTG TTCCTGATGT 4020
TTC 4024
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 80 1e-110 396
WERAM-Mua-0063 GSMUA_Achr3P22840_001 Musa acuminata 34 2e-23 107
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 43 1e-21 100
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 33 8e-19 91.7
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 32 4e-16 82.8
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 30 3e-14 76.6
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 46 3e-12 70.1
WERAM-Aet-0097 EMT09079 Aegilops tauschii 45 8e-12 68.6
WERAM-Zem-0158 GRMZM5G898314_P01 Zea mays 39 2e-11 67.4
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 51 6e-11 65.5
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 51 6e-11 65.5
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 51 6e-11 65.5
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 34 9e-11 65.1
WERAM-Sob-0059 Sb03g043350.1 Sorghum bicolor 40 1e-10 64.3
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 53 1e-10 64.3
WERAM-Prp-0078 EMJ06874 Prunus persica 38 2e-10 64.3
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 51 2e-10 64.3
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 53 2e-10 63.9
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 36 3e-10 63.2
WERAM-Met-0051 KEH38943 Medicago truncatula 33 1e-09 61.2
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 37 1e-08 58.2
WERAM-Sei-0085 Si022778m Setaria italica 43 2e-08 57.4
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 30 1e-07 54.7
WERAM-Thc-0115 EOY33573 Theobroma cacao 46 2e-07 53.9
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 41 3e-07 53.5
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 33 4e-07 53.1
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 38 7e-07 52.0
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 38 1e-06 51.6
WERAM-Arl-0026 fgenesh1_pg.C_scaffold_6000249 Arabidopsis lyrata 35 1e-06 51.6
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 33 1e-06 50.8
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 30 7e-06 48.9
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 30 7e-06 48.9
Created Date 25-Jun-2016