WERAM Information

Tag Content
WERAM ID WERAM-Orbr-0066
Ensembl Protein ID OB05G35770.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OB05G35770 OB05G35770.1 OB05G35770.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 8.00e-25 110
HDAC HD2 4.00e-24 108
Organism Oryza brachyantha
Domain Profile
  HDAC HD2
Query: 1  MEFWGLEVKPGQTVKCEPEDDRFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSAD 60
          MEFWG+ V P    K  PE+D  +H+SQA+L  + K  ++ V+ V     KLVIGTLS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 61 KFPQIQFDLVFEKEFELSHTSKTASVFFSGYK 92
          KFPQI FDLVF+KEFELSH+   A+V F GYK
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYK 92
Query: 198 TPKKPE-TGKKRAAEIVLKTPASDKKAKI-----ATPSGQKTGDKK-GVHVATPHPAKQA 250
           TPKKPE   KKR  E V KTP S KKAK      +TP  QKT +KK G H ATPHPAK+ 
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTP--QKTEEKKKGGHTATPHPAKKG 256
Query: 251 SKTPVN 256
            K+PVN
Sbjct: 257 GKSPVN 262
  HDAC HD2
Query: 1  MEFWGLEVKPGQTVKCEPEDDRFLHLSQAALGESKKGSDNAV-MYVKTDDQKLVIGTLSA 59
          MEFWG+EVK G+ +  +P  DR +H+SQ ALGESK      + +YV     KL+IGTLS 
Sbjct: 1  MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 60 DKFPQIQFDLVFEKEFELSHTSKTASVFFSGYKV 93
          +KFPQ+  ++V E+ F LSHT K  SVFFSGYKV
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV 94
Query: 215 KTPASDKKAKIATPSGQKTGDKK-GVHVATPHPAKQASKTP----VNDXXXXXXXXXXXX 269
           K PAS+KKAK  TP  QKT  KK  VHVATPHP+KQA K        +            
Sbjct: 208 KNPASNKKAKFVTP--QKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAG 265
Query: 270 XXXXXXCNKTFNSDMALQSHSKAKH 294
                 C +TF S+M LQSH+KAKH
Sbjct: 266 AFGCKSCTRTFTSEMGLQSHTKAKH 290
Protein Sequence
(Fasta)		MEFWGLEVKP GQTVKCEPED DRFLHLSQAA LGESKKGSDN AVMYVKTDDQ KLVIGTLSAD 60
KFPQIQFDLV FEKEFELSHT SKTASVFFSG YKVSQPPEED EMDFDSEEVE DEEEEEKIIP 120
VPKANGKVQG MENVQKKGKT IPSASKSKAV VNDDDDDDET DEDDSGDEGL SPEDDDDDDS 180
SDDDSSEDDE DESDEEETPK KPETGKKRAA EIVLKTPASD KKAKIATPSG QKTGDKKGVH 240
VATPHPAKQA SKTPVNDKAK EKSPKSGGGS VSCKSCNKTF NSDMALQSHS KAKHPTK 297
Nucleotide Sequence
(Fasta)		CCCAATCCTC GCTTAAACCC TAGCTCCGCC TCCTGCAAAT TTCCTAGGGT TTTTTCCGCC 60
GCCGCCGCCC ATTCCGATGG AGTTCTGGGG TCTTGAGGTC AAGCCTGGGC AGACTGTCAA 120
ATGTGAGCCT GAAGATGACC GCTTTTTGCA CCTTTCTCAG GCTGCTCTTG GAGAATCAAA 180
GAAAGGATCT GATAATGCTG TGATGTATGT TAAGACTGAT GATCAAAAGC TAGTCATTGG 240
AACCCTCTCA GCTGACAAGT TCCCTCAAAT CCAATTTGAT TTGGTCTTTG AGAAAGAGTT 300
TGAACTGTCA CACACCTCAA AGACTGCCAG TGTGTTCTTT TCTGGCTACA AAGTTTCCCA 360
GCCACCTGAG GAAGATGAGA TGGATTTTGA TTCTGAAGAA GTTGAAGATG AAGAGGAGGA 420
AGAAAAAATC ATTCCAGTGC CCAAGGCAAA TGGCAAGGTG CAAGGTATGG AAAATGTGCA 480
GAAAAAAGGC AAGACAATTC CTTCTGCTTC AAAATCAAAG GCTGTGGTGA ATGACGATGA 540
TGACGATGAT GAAACTGATG AGGATGATTC TGGGGATGAA GGACTTTCTC CTGAGGATGA 600
TGATGACGAT GATTCTTCTG ATGATGATTC CAGTGAAGAT GATGAGGATG AGAGTGACGA 660
AGAAGAAACT CCCAAGAAGC CAGAGACTGG AAAGAAGAGA GCAGCTGAAA TTGTGTTGAA 720
GACACCTGCA TCTGATAAGA AAGCAAAGAT TGCTACACCA TCAGGCCAGA AGACGGGCGA 780
CAAGAAGGGT GTCCATGTAG CAACTCCACA TCCGGCAAAG CAAGCAAGCA AGACCCCTGT 840
GAATGATAAG GCAAAGGAGA AGTCCCCCAA ATCCGGCGGT GGGTCAGTTT CTTGCAAATC 900
TTGCAACAAG ACATTCAACA GTGATATGGC TCTGCAATCT CACTCGAAGG CCAAACATCC 960
TACCAAGTGA 971
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 87 1e-100 363
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 87 1e-100 363
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 73 3e-90 328
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 81 4e-87 318
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 64 4e-61 232
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 93 7e-48 187
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 92 1e-43 174
WERAM-Sei-0085 Si022778m Setaria italica 84 4e-43 172
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 75 4e-43 172
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 69 9e-42 167
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 79 2e-37 153
WERAM-Aet-0097 EMT09079 Aegilops tauschii 78 4e-37 152
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 65 5e-37 152
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 43 6e-37 151
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 66 1e-34 144
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 63 3e-30 129
WERAM-Prp-0078 EMJ06874 Prunus persica 63 4e-30 129
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 62 5e-29 125
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 58 4e-28 122
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 58 6e-28 122
WERAM-Thc-0115 EOY33573 Theobroma cacao 55 1e-27 120
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 58 3e-27 119
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 62 2e-26 117
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 62 2e-26 117
WERAM-Met-0051 KEH38943 Medicago truncatula 58 4e-26 115
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 55 1e-24 110
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 55 2e-24 110
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 48 2e-23 107
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 49 3e-23 106
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 56 3e-22 103
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 56 3e-22 102
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 44 1e-19 94.4
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 39 1e-13 74.3
WERAM-Amt-0052 ERN12770 Amborella trichopoda 64 4e-11 65.9
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 36 6e-10 62.4
Created Date 25-Jun-2016