WERAM Information

Tag Content
WERAM ID WERAM-Orl-0054
Ensembl Protein ID KN539082.1_FGP007
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
KN539082.1_FG007 KN539082.1_FGT007 KN539082.1_FGP007
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 4.00e-21 100
Organism Oryza longistaminata
Domain Profile
  HDAC HD2
Query: 427 EAAGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSADK 486
           E  G+ V P    K  PE++  +H+SQA+L  + K  ++ V+ V     KLVIGTLS DK
Sbjct: 2   EFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQDK 61
Query: 487 FPQIQFDLVFDKEFELSHTSKTASVFFSGYKMKRRKKRSF 526
           FPQI FDLVFDKEFELSH+   A+V F GYK    ++  F
Sbjct: 62  FPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDF 101
Query: 552 TPKKPE-TGKRKVAEIVLKTPSS-----DKKAKIATPSGQKTGDKK-GVHVATPHPAKQA 604
           TPKKPE   K++  E V KTP S        A  +TP  QKT +KK G H ATPHPAK+ 
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTP--QKTEEKKKGGHTATPHPAKKG 256
Query: 605 SKTPVN 610
            K+PVN
Sbjct: 257 GKSPVN 262
Protein Sequence
(Fasta)		MHLDASYFSL APDLLDLVQM ILRALKELPD PIISSRRAIA KYISDNFSGL PSHHDALLTV 60
HLRRLRSQGL LLMSGHSYLL STSATAARGR GRGRPPKKAS SSAPPQKRGP GRPRKNTALF 120
PVPVLEAKPG RGRPRKNPLP VASSTSSAAA ATALSLRVKR GPGRPRKNAA ATPLRLGVKR 180
GPGRPRKNAT ATPLSLGVKR GPGRPRKNAA AAAASPVAPP PASPLKRGVG RPRKNATPLV 240
KPGPGRPSGF KRGPGRPRKN ATSPVLSVPP TAAAVLGVKR GRGRPRKDKP LQSWSVLSGG 300
AAMTKRGPGR PRKKRPLEAG GVVAAQVDTA DGGEAGAVQN GGEVRCLLSD GASSMENRGP 360
GSPRKEVLLE NEPTVSTLVG KRGRGRPKKE KPSAARLAET GDAKSMGIKR GRGRPRKDSS 420
FQAVFAEAAG LEVKPGQTVK CEPEDERFLH LSQAALGESK KGSDNAVMYV KTDDQKLVIG 480
TLSADKFPQI QFDLVFDKEF ELSHTSKTAS VFFSGYKMKR RKKRSFQLPG QMDSSEDDSS 540
EDDEDESDEE ETPKKPETGK RKVAEIVLKT PSSDKKAKIA TPSGQKTGDK KGVHVATPHP 600
AKQASKTPVN DKSKEKSPKS GGGSISCKSC SKTFNSEMAL QSHSKAKHPA K 651
Nucleotide Sequence
(Fasta)		ATGCATCTGG ATGCTTCTTA CTTCTCACTT GCTCCAGATC TCCTTGATTT GGTGCAGATG 60
ATCCTGCGGG CGCTCAAGGA GCTTCCAGAT CCGATCATCT CCAGCCGCCG TGCCATCGCC 120
AAGTACATCT CCGACAACTT CTCCGGCCTC CCTTCTCACC ACGACGCGCT CCTCACCGTT 180
CACCTCCGCC GCCTCAGGTC ACAGGGCCTT CTCCTCATGT CTGGACACTC GTACCTTCTC 240
TCCACCTCCG CCACCGCCGC TCGAGGACGG GGACGAGGAC GACCGCCCAA GAAAGCTTCC 300
TCCTCCGCGC CGCCTCAAAA GCGCGGACCC GGCCGACCCC GCAAGAATAC AGCCCTGTTT 360
CCGGTTCCTG TGCTTGAGGC GAAGCCTGGG CGCGGGCGAC CCCGGAAGAA CCCTCTCCCT 420
GTGGCTTCCT CCACCTCCTC TGCTGCTGCT GCTACGGCGT TGAGCCTGAG AGTGAAGCGG 480
GGACCTGGGA GGCCGCGCAA GAATGCTGCT GCTACCCCGT TGAGACTGGG AGTGAAGCGG 540
GGACCTGGGA GACCGCGCAA GAATGCCACT GCTACGCCGT TGAGCCTGGG AGTGAAGCGG 600
GGACCTGGGA GGCCGCGCAA GAATGCTGCT GCTGCTGCTG CCTCTCCCGT TGCTCCGCCG 660
CCTGCATCTC CACTGAAGCG GGGTGTTGGA CGCCCAAGGA AGAACGCCAC TCCTCTAGTC 720
AAGCCTGGAC CTGGGAGGCC GTCTGGATTC AAACGTGGAC CTGGCCGCCC TCGCAAGAAT 780
GCCACTTCTC CTGTGCTGTC AGTGCCACCC ACTGCTGCTG CTGTGTTGGG AGTGAAGCGT 840
GGCCGTGGGC GCCCTAGAAA GGATAAACCA TTGCAATCTT GGTCTGTGCT CTCTGGCGGT 900
GCTGCAATGA CTAAGAGAGG GCCTGGGAGG CCAAGAAAGA AGAGGCCACT GGAAGCTGGA 960
GGTGTTGTGG CAGCACAGGT AGACACTGCA GATGGAGGTG AGGCTGGAGC CGTTCAAAAT 1020
GGAGGTGAAG TTAGGTGTCT GCTCTCTGAT GGTGCTTCTT CAATGGAGAA CAGAGGGCCT 1080
GGGAGTCCTA GGAAGGAGGT GCTATTGGAA AATGAACCTA CAGTTTCTAC ATTGGTGGGA 1140
AAGAGAGGCC GTGGCCGTCC AAAAAAGGAG AAACCATCAG CAGCAAGGCT TGCTGAAACT 1200
GGAGATGCTA AATCAATGGG GATCAAGAGA GGTCGTGGAA GACCAAGAAA GGACAGTTCC 1260
TTTCAAGCTG TGTTTGCAGA AGCTGCAGGT CTTGAAGTCA AGCCTGGACA GACTGTCAAA 1320
TGTGAGCCTG AAGATGAACG CTTTTTGCAC CTTTCTCAGG CTGCTCTTGG GGAATCAAAG 1380
AAAGGATCTG ACAATGCAGT AATGTATGTT AAAACTGATG ATCAAAAGCT AGTCATTGGA 1440
ACCCTCTCAG CTGACAAGTT CCCTCAAATC CAGTTTGATT TGGTCTTTGA CAAAGAGTTT 1500
GAGCTGTCAC ACACTTCAAA GACTGCTAGT GTGTTCTTTT CTGGCTACAA AATGAAGAGG 1560
AGGAAGAAAA GATCATTCCA GCTCCCAGGG CAAATGGATT CTTCTGAGGA TGATTCCAGC 1620
GAAGATGATG AGGATGAGAG TGACGAGGAA GAAACTCCCA AGAAGCCAGA GACTGGAAAG 1680
AGGAAAGTAG CTGAAATTGT GTTGAAGACA CCTTCGTCTG ATAAGAAGGC AAAGATTGCT 1740
ACACCATCAG GCCAGAAGAC AGGTGACAAG AAGGGTGTCC ATGTAGCAAC TCCACATCCG 1800
GCAAAGCAGG CTAGCAAGAC CCCCGTGAAT GACAAGTCAA AGGAGAAGTC CCCAAAATCC 1860
GGTGGTGGGT CAATTTCTTG CAAGTCATGC AGCAAGACGT TCAACAGTGA AATGGCTCTG 1920
CAATCTCACT CGAAGGCCAA GCACCCCGCC AAGTGA 1957
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 80 1e-79 295
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 97 6e-48 189
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 97 6e-48 189
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 93 1e-46 186
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 96 1e-42 172
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 89 4e-40 163
WERAM-Sei-0085 Si022778m Setaria italica 81 4e-38 157
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 81 1e-37 155
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 77 9e-36 149
WERAM-Aet-0097 EMT09079 Aegilops tauschii 76 1e-33 142
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 67 1e-33 142
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 70 1e-30 132
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 63 7e-30 129
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 75 8e-27 119
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 59 9e-26 115
WERAM-Prp-0078 EMJ06874 Prunus persica 60 1e-25 115
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 61 4e-24 110
WERAM-Thc-0115 EOY33573 Theobroma cacao 55 9e-24 109
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 57 5e-23 107
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 51 7e-23 106
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 55 1e-22 105
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 57 4e-22 103
WERAM-Met-0051 KEH38943 Medicago truncatula 55 8e-22 102
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 57 1e-21 102
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 57 2e-21 102
WERAM-Arl-0013 Al_scaffold_0006_2135 Arabidopsis lyrata 47 4e-21 100
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 49 6e-21 100
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 49 1e-19 95.5
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 49 4e-19 94.4
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 55 5e-19 93.6
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 55 5e-19 93.6
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 41 3e-15 80.9
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 39 1e-10 66.2
WERAM-Amt-0052 ERN12770 Amborella trichopoda 64 1e-10 65.9
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 34 4e-09 60.8
Created Date 25-Jun-2016