WERAM Information

Tag Content
WERAM ID WERAM-Mua-0063
Ensembl Protein ID GSMUA_Achr3P22840_001
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GSMUA_Achr3G22840_001 GSMUA_Achr3T22840_001 GSMUA_Achr3P22840_001
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 2.00e-26 116
Organism Musa acuminata
Domain Profile
  HDAC HD2
Query: 1  MEFWGLEVQPGKTVKVDPGENKLLHLSQASLGEVKDKGNEGVPVFVKFDNKKLVIGTLSA 60
          MEFWG+EV+ GK V V P E  L+H+SQASLGE K+K  E VP+ VK  N+ LV+GTLS 
Sbjct: 1  MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 61 DKCAQIQYDLVFEKEFELSHGLKNTSIYFLGYKT 94
          +   Q+  DLVF+KEFELSH     S+YF+GYKT
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT 94
Query: 213 TPKKVETGNKRPAGSALKTPAPEKKAKV-ISPAGNKKTGADGKKGSYVATPYPAKQGKTP 271
           TPKK  +  KR   +  K P   KKAKV ++P   +KT    K G               
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAKVAVTP---QKTDEKKKGG--------------- 205
Query: 272 ANSDKSKQQTPKSAGSISCNSCSRTFNSDNALQAHTKAKHSGGK 315
               K+  Q+PKSA  +SC SC +TFNS NAL++H KAKH+  K
Sbjct: 206 ----KAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAAAK 245
Protein Sequence
(Fasta)		MEFWGLEVQP GKTVKVDPGE NKLLHLSQAS LGEVKDKGNE GVPVFVKFDN KKLVIGTLSA 60
DKCAQIQYDL VFEKEFELSH GLKNTSIYFL GYKTVIQEEG EYPFDIYTES ESDEEDIPLA 120
QNINGKSEVK EEKPKPSAGK PNALKADASV AKSKPKMEVV KDEKRKADEN DDDDDDDESE 180
EDDSDGDEDM LDEDDDSDDE DADESSDEEE EATPKKVETG NKRPAGSALK TPAPEKKAKV 240
ISPAGNKKTG ADGKKGSYVA TPYPAKQGKT PANSDKSKQQ TPKSAGSISC NSCSRTFNSD 300
NALQAHTKAK HSGGK 315
Nucleotide Sequence
(Fasta)		AAACCCTAAA GCCTCACCGC CTTTTTCTTG ATCTCGCCTT CTTCTTCGCC CTTCTCAAAA 60
CCCTAATCCT CCTCTTCCTC CTCGCCGACC GCCATGGAGT TTTGGGGGCT CGAAGTTCAG 120
CCTGGCAAAA CTGTTAAGGT CGATCCTGGG GAAAATAAAT TGTTACATCT TTCACAGGCA 180
TCACTAGGGG AGGTGAAAGA TAAAGGAAAT GAAGGCGTGC CAGTATTTGT GAAGTTTGAC 240
AATAAAAAGC TAGTTATTGG AACTCTCTCC GCTGACAAGT GTGCACAAAT TCAGTATGAT 300
TTGGTGTTTG AGAAAGAATT TGAACTATCT CATGGATTGA AGAACACGAG CATCTACTTC 360
TTGGGCTATA AGACTGTAAT TCAGGAGGAA GGCGAATATC CTTTTGATAT TTATACCGAA 420
TCTGAATCTG ATGAGGAGGA TATTCCACTG GCCCAGAATA TCAATGGCAA ATCTGAGGTA 480
AAGGAAGAAA AGCCCAAGCC CTCAGCTGGA AAACCAAATG CTCTAAAGGC TGATGCTTCA 540
GTTGCCAAGT CAAAACCTAA GATGGAGGTA GTTAAAGATG AGAAGCGGAA AGCTGATGAG 600
AATGATGACG ATGATGATGA TGATGAGTCT GAAGAAGATG ATTCTGATGG TGATGAGGAC 660
ATGCTTGACG AGGATGACGA TAGCGATGAT GAAGATGCGG ATGAAAGTTC TGATGAAGAG 720
GAAGAGGCTA CACCTAAGAA GGTTGAAACT GGTAACAAGA GGCCAGCTGG TTCTGCATTA 780
AAGACTCCTG CTCCAGAAAA GAAGGCAAAG GTGATTTCTC CAGCTGGGAA TAAAAAAACA 840
GGTGCTGATG GTAAGAAAGG CAGCTATGTT GCAACTCCTT ATCCTGCAAA ACAAGGGAAA 900
ACTCCAGCAA ACAGTGACAA GTCTAAGCAG CAAACTCCTA AATCTGCTGG CTCAATCTCC 960
TGCAATTCAT GCAGCAGAAC TTTTAACTCG GATAATGCTC TTCAAGCACA CACCAAAGCG 1020
AAGCATAGTG GCGGCAAATG AGTAGATTGC GGTAAGTACC ACATAGTCAG TGGTGTCATT 1080
GTCATGTCCA TTTTTGGATC TTGCAATTTT TCTTGGTTCG AGTCTTAGGA TAGGAGCATC 1140
CCCAATTAGA AAGACTTGAT ATTCTCCTCA ATGTTTCCTT GTTTGCTGCT AAGCTCGCTT 1200
GGATGATACC TAAAATCTTA TGTTTATCGG TTTTAAGCTG CACTCAAGGT AATTAGTATG 1260
ATGATGAAAC TGACCACCTT TGTATTAGTA GTGTTCTCTT GAGAAATCTG ATGGACTACC 1320
AGTTGCAAGT AATAACTATT AAAGCAATAT CTTGGGTAAT GTTCATCAAG CTTCTATTTT 1380
CTTG 1385
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 49 4e-46 182
WERAM-Thc-0115 EOY33573 Theobroma cacao 47 9e-46 181
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 64 9e-32 134
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 63 2e-31 133
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 63 2e-31 133
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 59 3e-31 133
WERAM-Prp-0078 EMJ06874 Prunus persica 53 2e-30 130
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 56 3e-30 129
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 64 1e-29 127
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 58 2e-29 127
WERAM-Sei-0085 Si022778m Setaria italica 60 6e-29 125
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 62 2e-28 123
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 61 2e-28 123
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 60 3e-28 123
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 59 4e-28 122
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 61 5e-28 122
WERAM-Aet-0097 EMT09079 Aegilops tauschii 60 2e-27 120
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 56 6e-27 118
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 62 7e-27 118
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 68 1e-26 117
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 68 1e-26 117
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 65 2e-26 116
WERAM-Art-0083 AT3G44750.1 Arabidopsis thaliana 59 3e-26 116
WERAM-Met-0051 KEH38943 Medicago truncatula 48 6e-26 115
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 57 2e-25 113
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 56 3e-25 113
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 54 1e-24 111
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 35 2e-22 103
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 48 5e-22 102
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 43 8e-20 95.1
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 49 4e-19 92.8
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 49 4e-19 92.8
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 39 1e-14 77.8
WERAM-Amt-0052 ERN12770 Amborella trichopoda 55 2e-14 77.0
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 33 3e-11 66.6
Created Date 25-Jun-2016