WERAM Information

Tag Content
WERAM ID WERAM-Mua-0006
Ensembl Protein ID GSMUA_Achr10P04780_001
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GSMUA_Achr10G04780_001 GSMUA_Achr10T04780_001 GSMUA_Achr10P04780_001
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 3.00e-26 116
Organism Musa acuminata
Domain Profile
  HDAC HD2
Query: 56  MEFWGLEIKPEETVKVDPGEDKYLHLSQASLGETKKGNENILVYVKFNNQKLVLGTLSAE 115
           MEFWG+ + P+   KV P ED  +H+SQASL  T K  E++++ V     KLV+GTLS +
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 116 KCAQIQYDLVFEKEFELSHSSNNASVYLCGYKTAALEADEYPFDLPSDSDADEDI 170
           K  QI +DLVF+KEFELSHS   A+V+  GYK+  +E D++       S  DED+
Sbjct: 61  KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDF------TSSDDEDV 109
Query: 271 KMAEPPNK-RPAGSALKTPVS-----EKKAKLISPGKGESQKKGGAAKKDGHSATPIPAK 324
           K  EP NK RP  S  KTPVS        A   +P K E +KKGG      H+ATP PAK
Sbjct: 201 KKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGG------HTATPHPAK 254
Query: 325 QSGKTPAKNDKSKQQTPKSAGSVNCKSCGKNFNS 358
           + GK+P   ++S +   +S+G  N K   K FNS
Sbjct: 255 KGGKSPVNANQSPKSGGQSSGGNNNK---KPFNS 285
Protein Sequence
(Fasta)		MYIYIYISAI RSLQGIPGGF KLPLGAQNPN PPLNSPFSPR APFRPLPSRH SIPTAMEFWG 60
LEIKPEETVK VDPGEDKYLH LSQASLGETK KGNENILVYV KFNNQKLVLG TLSAEKCAQI 120
QYDLVFEKEF ELSHSSNNAS VYLCGYKTAA LEADEYPFDL PSDSDADEDI QLDQKTNGKS 180
IVKVEQTKST EGKPKVPQAN APASKAKPKI EELKKADKQK PNKDDDEDVD GEESDEDESD 240
DDEDMVEAED DSEDEDEDEV ESSDEDEAPV KMAEPPNKRP AGSALKTPVS EKKAKLISPG 300
KGESQKKGGA AKKDGHSATP IPAKQSGKTP AKNDKSKQQT PKSAGSVNCK SCGKNFNSDN 360
ALQSHTKAKH SAGK 374
Nucleotide Sequence
(Fasta)		ATGTATATAT ATATATATAT ATCGGCGATC CGAAGTCTCC AAGGGATCCC TGGTGGCTTT 60
AAATTGCCTC TCGGAGCCCA AAACCCTAAT CCCCCACTAA ACTCGCCATT TTCTCCTCGC 120
GCTCCTTTCC GACCCCTTCC CTCCCGGCAT TCCATTCCCA CCGCCATGGA GTTCTGGGGT 180
CTGGAAATTA AGCCTGAAGA GACTGTCAAG GTTGATCCTG GAGAGGACAA ATATTTGCAT 240
CTTTCTCAGG CTTCTTTAGG GGAGACTAAG AAGGGAAATG AGAATATACT GGTCTATGTG 300
AAATTTAACA ACCAAAAGCT TGTACTTGGA ACACTCTCTG CAGAGAAATG TGCTCAAATT 360
CAATATGATT TAGTATTTGA GAAAGAATTT GAGCTATCTC ACAGCTCAAA CAATGCAAGT 420
GTCTACTTAT GTGGCTATAA AACTGCTGCA CTTGAGGCAG ACGAATATCC TTTTGATCTT 480
CCCAGTGACT CGGATGCTGA TGAAGATATT CAACTTGACC AGAAGACTAA TGGCAAGTCT 540
ATTGTGAAGG TTGAACAGAC CAAATCTACA GAGGGAAAGC CAAAAGTTCC TCAAGCAAAT 600
GCCCCTGCTT CCAAGGCAAA ACCTAAAATA GAGGAACTGA AGAAGGCAGA TAAGCAAAAG 660
CCGAATAAGG ATGATGATGA AGATGTTGAT GGTGAAGAGT CTGACGAAGA TGAATCTGAT 720
GATGATGAGG ATATGGTTGA AGCGGAAGAT GATAGCGAAG ATGAGGACGA GGATGAAGTT 780
GAAAGCTCTG ATGAAGATGA AGCTCCTGTA AAAATGGCTG AACCTCCTAA TAAAAGGCCA 840
GCTGGTTCTG CTTTAAAAAC TCCTGTTTCG GAGAAGAAAG CAAAGTTAAT ATCCCCAGGG 900
AAAGGAGAGA GTCAGAAAAA GGGTGGTGCT GCTAAGAAAG ATGGCCATTC TGCTACCCCT 960
ATTCCGGCAA AACAGAGTGG AAAAACTCCT GCTAAGAATG ACAAGTCTAA ACAGCAAACC 1020
CCAAAATCGG CAGGCTCTGT CAATTGCAAG TCATGTGGCA AGAACTTCAA CTCTGACAAT 1080
GCTCTTCAAT CTCATACAAA AGCAAAGCAC AGTGCTGGCA AATGAGACAC CAAGATCATA 1140
TTTATGAAAG TGGTGGGGCT TCTCGGATGG ACCATTGGAA GTGATGAACC CACTCGGGGT 1200
GTTACGAGTT TTGTAAAAGT GGTGGGGCTT CTCGGATGTC ACTATGAATG TTGGGTTAAT 1260
AGCTTACAGT TTCCAAGTTT GCAGTTACGT TATTTTGTGT GTGTGGTGTA ATCAGTTACC 1320
ATTTTTTTAA AGTGCTTATT GGAGGATTCA GCAGTTTTTT CTGAGGATAG GACACCACTG 1380
AATCGAC 1388
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0115 EOY33573 Theobroma cacao 43 3e-41 166
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 64 9e-36 148
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 62 3e-35 146
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 62 3e-35 146
WERAM-Sob-0059 Sb03g043350.1 Sorghum bicolor 53 6e-31 132
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 61 7e-31 132
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 63 1e-30 131
WERAM-Sei-0085 Si022778m Setaria italica 65 3e-30 129
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 52 5e-30 129
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 65 5e-30 129
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 64 6e-30 129
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 52 3e-29 126
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 60 8e-29 125
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 61 2e-28 124
WERAM-Aet-0097 EMT09079 Aegilops tauschii 59 3e-28 123
WERAM-Met-0051 KEH38943 Medicago truncatula 49 7e-28 122
WERAM-Prp-0078 EMJ06874 Prunus persica 50 7e-28 122
WERAM-Zem-0158 GRMZM5G898314_P01 Zea mays 60 1e-27 121
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 54 2e-27 120
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 59 4e-27 119
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 47 4e-26 116
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 55 1e-25 114
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 54 3e-25 113
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 54 5e-25 112
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 55 1e-24 111
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 48 3e-24 109
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 51 5e-24 109
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 46 2e-23 107
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 42 3e-20 96.7
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 49 7e-20 95.5
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 49 7e-20 95.5
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 31 1e-18 91.7
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 38 7e-16 82.4
WERAM-Amt-0052 ERN12770 Amborella trichopoda 47 2e-13 73.9
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 35 3e-11 67.0
Created Date 25-Jun-2016