WERAM Information

Tag Content
WERAM ID WERAM-Zem-0015
Ensembl Protein ID GRMZM2G017142_P01
Gene Name LOC100216893 ZEAMMB73_747780
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G017142 GRMZM2G017142_T01 GRMZM2G017142_P01
GRMZM2G017142 GRMZM2G017142_T02 GRMZM2G017142_P02
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.00e-11 44.2 196 246
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t+C +Cg  +  +++++ Cd C++w+H+kCvk++  ++++ k++ CpsC +
  GRMZM2G017142_P01 196 TLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYKCPSCCN 246
                        78****999999999*******************555554489******86 PP
Protein Sequence
(Fasta)		MDASYRRAGT GSGSAPRSVE DIYKDYRSRR SAILRALTHD VEEFYALCDP EKENLCLYGY 60
ANEAWEVALP AEEVPTELPE PALGINFARD GMNRGDWLAL VAVHSDSWLV SVAFYYAARL 120
NRSDRKRLFG MMNDLPTVFE VVSSGVKQSK ERDRSGTDNG GRNKLSVKQT SEPRLENNAR 180
EPDEGYDEDD SNHSETLCGT CGGIYSADEF WIGCDVCEKW YHGKCVKITP AKAESIKQYK 240
CPSCCNSKRP RPI 253
Nucleotide Sequence
(Fasta)		ACCCGTCCGG GTGTACCGGT GTACTATCAT CCCTCGGCTC CAGGCCGCAT CGCGATCAGT 60
CATCTCTTTC CCTCCCAGCC TTCCTCCTGC GTCTCGCTCT CGCCGGAGGT CAGGCGCACC 120
GCCGCCGGGC GATGGACGCC TCCTACCGCC GCGCCGGCAC CGGGAGCGGC TCCGCTCCCC 180
GCTCCGTCGA GGACATCTAC AAGGACTACC GCTCCCGCCG CTCCGCCATC CTCCGCGCCC 240
TCACCCACGA CGTTGAGGAG TTCTACGCGC TGTGCGATCC AGAGAAGGAG AACCTGTGCC 300
TGTACGGCTA CGCGAACGAA GCGTGGGAGG TAGCGCTGCC GGCGGAGGAG GTGCCCACGG 360
AGCTTCCGGA GCCGGCGCTC GGGATCAACT TCGCGCGCGA CGGGATGAAC CGTGGCGACT 420
GGCTCGCGCT CGTCGCCGTA CACTCTGACT CGTGGCTCGT CTCCGTCGCA TTCTACTACG 480
CCGCGCGGCT CAACCGCAGT GATCGGAAGC GTTTGTTCGG CATGATGAAT GATCTGCCAA 540
CTGTTTTTGA AGTCGTCTCC AGTGGTGTGA AGCAATCAAA AGAGAGGGAT AGATCCGGTA 600
CTGACAATGG TGGTAGAAAT AAACTGTCGG TAAAGCAAAC AAGCGAGCCA CGATTAGAAA 660
ATAACGCCAG GGAGCCTGAT GAGGGCTACG ATGAAGATGA CAGCAACCAC AGCGAAACCT 720
TGTGCGGGAC ATGTGGTGGA ATATACAGCG CTGATGAGTT CTGGATCGGG TGCGACGTGT 780
GCGAGAAGTG GTACCATGGC AAGTGCGTGA AGATCACACC TGCAAAGGCG GAGAGCATAA 840
AGCAGTACAA GTGCCCAAGC TGCTGCAATT CAAAAAGACC TAGGCCGATT TAGGCCTATA 900
GCATCGCCCT CCTCCCGGGA GGACGGCCAT GGATGGAAGA AGACTGGACA AGCAGGTCAG 960
AGTTTCCTCT TGCGCAAGGT CAATGCCGCC TTGCGATGTT TACTGTACCT TTTCGATTAA 1020
GCTTACATAT GACGAACGAT GATGATGCTA ATGTTAGCAG GGAAAGATCA CACATTAATT 1080
TATAATCTTT TTGTGGTTTC TCCATGCCGT GGAGAGTTAT GGTAGTCTGT ATGTTGCCGG 1140
AGAAGGAATA GGGGCAGAGG AAGCCTTTGT AATCTTTCTA TAGGTGGAAT GTGCAGCTTA 1200
TGCGAAGATA ATAATAATCC GTGATGTTCA TGTTAATATA TTTTATTTAC T 1252
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 94 5e-142 500
WERAM-Sei-0039 Si010912m Setaria italica 90 2e-129 458
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 86 2e-116 416
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 84 5e-116 414
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 85 2e-115 412
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 84 2e-115 411
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 85 5e-115 410
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 84 5e-114 407
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 84 6e-113 404
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 76 9e-113 403
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 84 3e-112 401
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 78 7e-112 400
WERAM-Aet-0099 EMT23706 Aegilops tauschii 77 1e-106 382
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 73 3e-93 338
WERAM-Sot-0033 PGSC0003DMT400028638 Solanum tuberosum 65 2e-88 322
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 65 2e-88 322
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 68 7e-88 320
WERAM-Prp-0085 EMJ19499 Prunus persica 67 2e-86 315
WERAM-Viv-0083 VIT_13s0067g01000.t01 Vitis vinifera 71 3e-86 315
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 65 2e-85 312
WERAM-Thc-0059 EOY07191 Theobroma cacao 70 4e-85 311
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 65 8e-84 307
WERAM-Met-0092 KEH28874 Medicago truncatula 67 1e-83 306
WERAM-Amt-0010 ERN05231 Amborella trichopoda 68 4e-83 305
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 68 5e-83 304
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 68 6e-83 304
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 68 6e-83 304
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 68 6e-83 304
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 57 7e-81 297
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 64 3e-78 288
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 64 5e-77 284
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 63 1e-76 283
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 64 7e-76 280
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 64 2e-75 279
Created Date 25-Jun-2016