WERAM Information

Tag Content
WERAM ID WERAM-Zem-0011
Ensembl Protein ID GRMZM2G008425_P01
Gene Name Zm.33672 ZEAMMB73_180578
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G008425 GRMZM2G008425_T01 GRMZM2G008425_P01
GRMZM2G008425 GRMZM2G008425_T02 GRMZM2G008425_P02
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.30e-24 87.6 39 326
Organism Zea mays
Domain Profile
  HDAC Class-I
        class-1.txt   4 ayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf 95 
                        +y    d++ +  ++ hp    ++  +   ++  g   k ++v+p +a +e+ll +h+e+y++ lk +      + + e+   ++  +  v 
  GRMZM2G008425_P01  39 VYSPAYDISFLGLEKLHPFESAKWGRICRYLTREGYLDKKQMVEPLEACKEDLLVVHTEAYLNSLKCSFR---VSSIVEVPPVSLVPNWIVH 127
                        555666677777788899999999888888888888888999********************99986533...2334466678888899999 PP
        class-1.txt  96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttdrv 185
                         +l +  +   G+s+ +ak L   e+  ain  GG+hh   +e  Gfc   Di l i+  + + + + vl id+d h G+g e+ f +  rv
  GRMZM2G008425_P01 128 RKLLHPFRKQVGGSILSAK-LA-FERGWAINVGGGFHHCSADEGGGFCAYADISLCIQfAFVRlNISSVLIIDLDAHQGNGHEKDFANDGRV 217
                        9998888888888887665.43.45678*****************************8344455899************************* PP
        class-1.txt 186 mtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae. 276
                          + +  y+ + +P             +y    v l  g + ++y + + + ++   ++feP+ +v + G+D l gD+lg  ++s +g  + 
  GRMZM2G008425_P01 218 YILDM--YNAGIYPF-------DFTAKQYIDQKVELVSGSKTDEYLEQLDKALEICNSRFEPQLIVYNAGTDILDGDPLGRLKVSPEGVVTr 300
                        98766..66655664.......3344567777899999999888888889999********************************9997522 PP
        class-1.txt 277 ...cvkfvksfnlpllvlGGGGYtlr 299
                           + +f k+ n+pll+l  GGY + 
  GRMZM2G008425_P01 301 dekVFRFAKDRNIPLLMLTSGGYMKS 326
                        33499******************764 PP
Protein Sequence
(Fasta)		MASSSSSPAP ALAGEALRQK RILSSKLYLE VPSSKAPVVY SPAYDISFLG LEKLHPFESA 60
KWGRICRYLT REGYLDKKQM VEPLEACKED LLVVHTEAYL NSLKCSFRVS SIVEVPPVSL 120
VPNWIVHRKL LHPFRKQVGG SILSAKLAFE RGWAINVGGG FHHCSADEGG GFCAYADISL 180
CIQFAFVRLN ISSVLIIDLD AHQGNGHEKD FANDGRVYIL DMYNAGIYPF DFTAKQYIDQ 240
KVELVSGSKT DEYLEQLDKA LEICNSRFEP QLIVYNAGTD ILDGDPLGRL KVSPEGVVTR 300
DEKVFRFAKD RNIPLLMLTS GGYMKSSARV IADSIINLSN KNLIGLGSQL G 351
Nucleotide Sequence
(Fasta)		CGCCGAATCC TCTCCCGGCA CCGCAACCGC TGTTCCTCTG CGCGGAACGC GCGCGCGCCA 60
CAGCCGATCA GCCACCGCAG GATTCCTCGT CCACCGCGAC CATTCGGCTT CTCCCCAATC 120
CCGGCACGGC GGCACGGGAC CTCTCCCTCT CTCTCCCGCT GGCGGGCGAT GGCCTCCTCC 180
TCCTCCTCAC CTGCGCCCGC CCTGGCCGGG GAGGCGCTAC GCCAGAAACG CATCCTCTCC 240
AGCAAGCTCT ACCTCGAGGT CCCGTCCTCC AAGGCGCCGG TGGTTTACTC GCCGGCATAC 300
GACATCTCCT TCCTCGGCCT TGAGAAGCTG CACCCGTTTG AATCCGCCAA ATGGGGCCGC 360
ATCTGTAGGT ACCTCACCAG GGAAGGGTAC CTCGACAAGA AACAGATGGT GGAGCCATTG 420
GAAGCCTGCA AGGAGGATTT GCTAGTGGTG CACACGGAGG CGTATTTGAA CAGTCTCAAA 480
TGCAGCTTCA GAGTTTCCTC CATTGTAGAG GTCCCTCCTG TGTCGCTTGT CCCTAATTGG 540
ATTGTGCACA GAAAGCTACT ACACCCCTTC CGGAAGCAGG TGGGTGGGTC CATTTTATCA 600
GCCAAACTTG CATTTGAGAG AGGTTGGGCT ATTAATGTTG GTGGAGGATT TCACCATTGT 660
TCAGCAGATG AAGGGGGTGG ATTTTGTGCA TACGCTGACA TCTCTCTCTG CATCCAGTTT 720
GCTTTTGTCC GTCTAAATAT CTCAAGTGTA TTGATCATAG ACCTGGATGC CCACCAAGGA 780
AATGGACACG AAAAAGATTT TGCTAATGAT GGAAGGGTTT ACATTTTAGA CATGTACAAT 840
GCTGGAATTT ATCCCTTTGA TTTCACTGCT AAGCAATACA TTGATCAAAA AGTTGAATTA 900
GTTAGTGGGT CAAAAACAGA TGAATACTTG GAGCAACTTG ACAAAGCTCT CGAGATCTGC 960
AATAGTAGAT TTGAGCCCCA GTTGATTGTA TACAATGCTG GAACAGACAT CCTCGATGGC 1020
GATCCGTTGG GCAGATTGAA GGTAAGTCCT GAGGGTGTGG TTACCAGAGA CGAGAAGGTA 1080
TTTAGGTTCG CAAAAGATCG AAACATTCCT TTGCTCATGC TGACATCAGG AGGCTACATG 1140
AAGTCAAGTG CTCGAGTAAT AGCTGATTCG ATCATCAATC TGTCCAATAA AAACTTGATA 1200
GGATTAGGCA GCCAGCTGGG TTGAGCAAGA ACTTGTGACA GTATGCTTCT TATCGGGAAG 1260
CAATATCTCG TAAGAGCTTA TTCGATTAGG AGTGGATTAA AGAGGATTAA ATTCCTTGAT 1320
GGTCAAAATT GAATAGAAAG ATATCTAATC CTACTCAATC CACATGCAAT CGAACAAGGT 1380
TTAAAGGTGT AGTTTTTTTT TTTTTGTGAA GGATAACATG TATGCCACAA AAATGTTCTG 1440
TACATAACAC GGGATGTTTG TGAATCTATA CAACACAAAA ACAAAAACAA 1491
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 95 0.0 671
WERAM-Sei-0028 Si006784m Setaria italica 93 0.0 658
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 82 7e-171 597
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 82 7e-171 597
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 82 7e-171 597
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 82 7e-171 597
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 82 7e-171 597
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 82 2e-170 595
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 82 1e-168 589
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 82 1e-168 589
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 80 3e-167 585
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 81 1e-159 560
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 79 7e-157 550
WERAM-Aet-0055 EMT26973 Aegilops tauschii 72 1e-152 536
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 82 5e-150 527
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 73 8e-150 526
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 71 2e-149 526
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 74 2e-149 525
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 72 7e-146 514
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 79 8e-146 513
WERAM-Thc-0103 EOY29884 Theobroma cacao 72 2e-145 512
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 70 2e-145 512
WERAM-Met-0014 AES59273 Medicago truncatula 72 3e-145 511
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 69 2e-144 509
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 69 5e-144 507
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 68 1e-141 499
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 68 5e-141 498
WERAM-Php-0013 PP1S127_95V6.1 Physcomitrella patens 66 3e-132 468
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 63 2e-125 445
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 80 5e-124 441
WERAM-Prp-0064 EMJ26901 Prunus persica 71 2e-119 426
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 84 4e-117 418
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 58 7e-113 404
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 58 7e-113 404
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 58 8e-113 404
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 58 8e-113 404
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 58 9e-113 404
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 59 1e-112 403
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 58 2e-112 403
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 58 2e-112 402
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 58 2e-112 402
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 58 3e-112 402
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 58 3e-112 402
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 57 4e-112 401
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 58 5e-112 401
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 57 6e-112 401
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 59 9e-112 400
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 58 1e-111 400
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 58 1e-111 400
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 57 2e-111 399
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 57 2e-111 399
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 58 2e-111 399
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 57 5e-111 398
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 59 8e-111 397
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 58 1e-110 396
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 57 2e-110 396
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 58 2e-110 395
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 57 3e-110 395
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 57 4e-110 395
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 57 7e-110 394
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 58 1e-109 393
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 57 6e-109 391
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 57 2e-108 389
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 57 1e-107 387
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 56 1e-106 383
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 57 4e-106 381
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 56 1e-105 380
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 60 6e-105 378
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 57 7e-105 377
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 54 1e-104 376
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 74 2e-104 376
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 59 1e-103 373
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 59 2e-103 373
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 55 2e-103 372
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 59 2e-103 372
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 55 3e-103 372
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 53 3e-99 358
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 50 3e-96 348
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 51 5e-93 338
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 60 1e-92 337
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 52 1e-91 334
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 56 2e-89 326
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 57 5e-87 318
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 60 5e-85 311
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 50 2e-84 309
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 47 6e-83 305
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 57 4e-81 298
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 46 1e-80 297
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 49 6e-75 278
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 73 3e-73 273
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 61 8e-69 258
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 38 7e-54 208
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 55 5e-45 179
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 38 3e-44 176
WERAM-Amt-0062 ERN16364 Amborella trichopoda 65 4e-44 176
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 54 2e-39 160
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 55 2e-35 147
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 28 8e-29 125
WERAM-Osl-0037 ABP00055 Ostreococcus lucimarinus 29 5e-26 115
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 30 2e-23 107
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 26 4e-19 93.2
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 27 6e-18 89.0
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 26 2e-17 87.0
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 27 3e-17 86.7
WERAM-Scs-0017 EDO01763 Sclerotinia sclerotiorum 30 1e-16 85.1
WERAM-Pug-0033 EFP89819 Puccinia graminis 26 1e-15 81.6
WERAM-Vip-0110 ENSVPAP00000010202.1 Vicugna pacos 25 1e-15 81.3
WERAM-Lab-0007 EDR12637 Laccaria bicolor 28 1e-15 81.3
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 31 2e-15 80.9
WERAM-Crn-0035 AAW45210 Cryptococcus neoformans 28 2e-15 80.5
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 25 3e-15 80.1
WERAM-Trr-0017 EGR48353 Trichoderma reesei 28 4e-15 79.7
WERAM-Soa-0084 ENSSARP00000008041.1 Sorex araneus 27 4e-15 79.7
WERAM-Phn-0003 SNOT_00459 Phaeosphaeria nodorum 31 5e-15 79.3
Created Date 25-Jun-2016