WERAM Information

Tag Content
WERAM ID WERAM-Glm-0229
Ensembl Protein ID GLYMA17G34770.1
Gene Name GLYMA_17G229600
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA17G34770 GLYMA17G34770.1 GLYMA17G34770.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 5.50e-29 103.6 35 321
Organism Glycine max
Domain Profile
  HDAC Class-I
      class-1.txt   5 yaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg. 97 
                      y  + d+  + +++ hp   +++  +  +++++g+  k  +v+p +as+++ll +hse y++ lk++++     ++ e+   ++  +c v ++ 
  GLYMA17G34770.1  35 YSASYDIEFLGIEKLHPFDSSKWGRICGFLVSFGILDKKCVVEPLEASKDDLLVVHSESYLNTLKQSSKV---AMIVEVPPVALIPNCLVQQKv 125
                      666677777788999************************************************9987765...456678899999*****9872 PP
      class-1.txt  98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttdrvmtvs 189
                      lf + +   G+++ aa kL  ke+  ain  GG+hh   ++  Gfc   Di l i   + + + +rv+ id+d h G+g e  f + +rv  + 
  GLYMA17G34770.1 126 LFPFRKQ-VGGTILAA-KLA-KERGWAINMGGGFHHCSAQKGGGFCAYADISLCIHfAFVRlNISRVMIIDLDAHQGNGHEMDFAYDSRVYILD 216
                      5777665.56666554.565.56789****************************9634555599**************************9865 PP
      class-1.txt 190 fhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgha....ecvk 279
                         y+++ +P          e  +y    v +k g   e+y + + + ++   ++f+Pe v+ + G+D l gD+lg  ++s +g++    ++ +
  GLYMA17G34770.1 217 --MYNPGIYPL-------DYEARNYINQKVEVKSGTVTEEYLQKLDEALEVAGHRFNPELVIYNAGTDILEGDPLGRLEISPEGITlrdeKVFR 301
                      ..577766664.......45555677788999***9999999999***************************************864443699* PP
      class-1.txt 280 fvksfnlpllvlGGGGYtlr 299
                      f ++ n+p+++l  GGY + 
  GLYMA17G34770.1 302 FAREKNIPIVMLTSGGYMKS 321
                      *****************865 PP
Protein Sequence
(Fasta)		MSSSSANDAE ALRRNRILSS KLYFDVSPSK VPLIYSASYD IEFLGIEKLH PFDSSKWGRI 60
CGFLVSFGIL DKKCVVEPLE ASKDDLLVVH SESYLNTLKQ SSKVAMIVEV PPVALIPNCL 120
VQQKVLFPFR KQVGGTILAA KLAKERGWAI NMGGGFHHCS AQKGGGFCAY ADISLCIHFA 180
FVRLNISRVM IIDLDAHQGN GHEMDFAYDS RVYILDMYNP GIYPLDYEAR NYINQKVEVK 240
SGTVTEEYLQ KLDEALEVAG HRFNPELVIY NAGTDILEGD PLGRLEISPE GITLRDEKVF 300
RFAREKNIPI VMLTSGGYMK SSAGVIADSI VNLSKKCLIE TSGAPKST 348
Nucleotide Sequence
(Fasta)		AATAACCAAA TAGTGGAATG TTTCATTAAA TAAATAAAAC AACAAAACGG TGTATTTCTG 60
GATAATACTA CTGTAGCTTA TGTAATGTGG AACATTCCAT TTTTTCGGTG CCATTCATGA 120
TTTTTATCAA CCGCTGCGTT TTTTGCATCG AGTATCCGAG TTAAGCAAGG TTCGCCGCCG 180
TCAAAGCGTT TCCGATTCTC CACCACCGCC GTAGCTGCCG CCGTCAACCG TCGCCATCGA 240
TGTCGTCTTC TTCCGCCAAC GATGCCGAGG CTCTCCGGCG CAACCGCATC CTCTCCAGCA 300
AGCTCTACTT CGACGTGTCT CCGTCCAAGG TTCCGCTAAT CTACTCCGCG TCTTACGACA 360
TAGAGTTTCT CGGCATAGAG AAACTGCATC CGTTTGATTC GTCGAAGTGG GGACGCATTT 420
GTGGATTCCT CGTTTCGTTT GGTATTCTTG ACAAAAAATG CGTCGTTGAG CCTTTGGAAG 480
CTTCCAAGGA TGATCTTCTA GTGGTACACT CTGAATCGTA TTTGAATACC CTGAAGCAGA 540
GTTCAAAAGT TGCTATGATA GTTGAGGTCC CTCCTGTGGC ATTAATTCCC AATTGTCTTG 600
TGCAACAAAA AGTTCTTTTT CCATTCAGGA AGCAGGTTGG AGGAACTATA TTGGCTGCGA 660
AACTTGCAAA GGAGAGAGGA TGGGCCATTA ACATGGGAGG TGGTTTTCAT CACTGTTCTG 720
CACAAAAAGG GGGTGGATTC TGTGCTTACG CAGATATTTC TCTATGCATC CACTTTGCTT 780
TTGTTCGGTT GAATATATCA AGGGTGATGA TCATTGATCT TGATGCACAT CAAGGAAACG 840
GTCATGAAAT GGACTTCGCT TATGATAGCC GAGTCTATAT CCTGGATATG TACAATCCTG 900
GAATATATCC TTTGGATTAT GAGGCGAGAA ACTACATAAA TCAGAAAGTT GAAGTAAAGA 960
GTGGGACAGT TACAGAAGAG TACCTGCAAA AATTAGATGA AGCACTTGAG GTTGCTGGGC 1020
ATAGGTTTAA CCCTGAGTTG GTTATTTATA ATGCTGGAAC TGACATCCTA GAAGGTGATC 1080
CATTAGGAAG GTTGGAGATC AGTCCTGAAG GAATTACCCT TAGAGATGAG AAAGTTTTCC 1140
GGTTTGCTCG TGAAAAAAAC ATTCCTATCG TTATGCTCAC TTCAGGTGGT TACATGAAGT 1200
CCAGTGCTGG AGTCATTGCA GATTCAATAG TCAATCTCTC GAAGAAATGC TTGATAGAAA 1260
CGAGTGGAGC TCCAAAGTCT ACGTAAAGTG CTCCTGTGTT TTACTGATCA TGAATGGTCC 1320
CTTGTAAGAG TTTTCCAGAT CCTTTGTGTA TTTGGGTATA GAATGTTTCC ATTTTAGTGG 1380
AAACTTTGAT GTACAGTATT TTAATATAAA AAAGAACTTA GTGTAGATGA AAATGTGTTC 1440
TACGTGAGTT GTAACAAGTC CGTAAATGCT GCTGGTATAT TAGTACTACA TAATGCATAA 1500
ATGAGTTGTA TATTATTTCA TCATTTTTTT GGAACGATGG TCTTTTTAGC TTTTTGTTTT 1560
GATTTGTCA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0014 AES59273 Medicago truncatula 86 8e-178 620
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 82 4e-166 581
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 80 1e-164 576
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 80 3e-161 565
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 78 5e-158 554
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 77 4e-157 551
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 77 2e-153 539
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 78 3e-153 538
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 76 2e-152 536
WERAM-Thc-0103 EOY29884 Theobroma cacao 76 4e-152 535
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 76 1e-151 533
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 76 1e-151 533
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 76 1e-151 533
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 76 1e-151 533
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 76 1e-151 533
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 73 2e-151 532
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 76 3e-151 531
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 74 3e-151 531
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 73 1e-150 529
WERAM-Sei-0028 Si006784m Setaria italica 73 2e-148 522
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 71 3e-146 515
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 72 7e-146 514
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 73 2e-140 495
WERAM-Prp-0064 EMJ26901 Prunus persica 82 8e-138 487
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 71 7e-136 480
WERAM-Aet-0055 EMT26973 Aegilops tauschii 64 2e-135 479
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 74 6e-134 474
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 65 2e-133 472
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 73 4e-132 468
WERAM-Php-0013 PP1S127_95V6.1 Physcomitrella patens 66 6e-131 464
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 73 2e-113 405
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 82 2e-111 399
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 57 2e-109 393
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 56 3e-108 389
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 58 7e-107 384
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 58 1e-106 383
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 78 1e-106 383
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 58 2e-106 382
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 58 3e-106 382
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 57 5e-106 381
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 57 7e-106 381
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 58 1e-105 380
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 57 1e-105 380
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 57 1e-105 380
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 57 1e-105 380
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 57 1e-105 380
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 57 2e-105 379
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 57 2e-105 379
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 57 2e-105 379
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 57 3e-105 379
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 57 3e-105 379
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 56 3e-105 379
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 57 3e-105 379
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 57 4e-105 378
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 55 5e-105 378
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 57 5e-105 378
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 57 7e-105 377
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 58 8e-105 377
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 56 9e-105 377
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 57 1e-104 377
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 57 1e-104 377
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 57 1e-104 377
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 59 1e-104 376
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 58 2e-104 376
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 56 4e-104 375
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 55 5e-104 375
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 58 4e-103 372
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 57 3e-102 369
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 57 8e-102 367
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 58 7e-101 364
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 59 1e-99 360
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 59 1e-99 360
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 59 8e-99 357
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 54 2e-97 353
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 55 3e-97 352
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 54 7e-97 351
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 51 1e-94 343
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 61 3e-90 329
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 50 1e-89 327
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 55 5e-88 321
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 51 1e-87 320
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 50 1e-86 317
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 50 1e-85 313
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 61 6e-84 308
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 57 4e-83 305
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 45 2e-81 300
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 59 1e-78 290
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 46 5e-76 281
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 47 1e-70 263
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 60 3e-65 246
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 58 7e-60 228
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 36 6e-47 185
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 56 8e-45 178
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 39 8e-44 174
WERAM-Amt-0062 ERN16364 Amborella trichopoda 66 1e-42 171
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 55 4e-40 162
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 55 9e-33 138
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 30 1e-30 131
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 29 3e-27 120
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 33 1e-25 114
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 28 4e-25 112
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 26 4e-21 99.8
WERAM-Vip-0110 ENSVPAP00000010202.1 Vicugna pacos 26 3e-20 96.3
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 27 8e-19 92.0
WERAM-Ten-0066 ENSTNIP00000008499.1 Tetraodon nigroviridis 27 1e-18 91.3
WERAM-Trr-0017 EGR48353 Trichoderma reesei 28 2e-18 90.9
WERAM-Soa-0084 ENSSARP00000008041.1 Sorex araneus 28 7e-18 88.6
WERAM-Trv-0003 EHK19072 Trichoderma virens 28 1e-17 88.2
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 26 1e-17 88.2
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 26 2e-17 87.4
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 25 3e-17 86.7
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 27 4e-17 86.3
WERAM-Lab-0002 EDR16061 Laccaria bicolor 28 5e-17 85.9
Created Date 25-Jun-2016