| Tag |
Content |
| WERAM ID |
WERAM-Vip-0110 |
| Ensembl Protein ID |
ENSVPAP00000010202.1 |
| Gene Name |
HDAC8 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.30e-129 |
429.5 |
17 |
323 |
|
| Organism |
Vicugna pacos |
| Domain Profile |
HDAC Class-I
class-1.txt 4 ayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
+y+y+++ +++++++ +++pkr ivkpk as+ee+++fh+++y+++l+kv++e +++++ ++ ++++g+dc
ENSVPAP00000010202.1 17 VYIYSPE--YVSMCDSLAKVPKRXXXXXXXXXXXXXXXXXXIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHP-DSIEYGLGYDC 102
6888888..88999*************************************************************99.6789******* PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181
P ++g+f+y+++++Ga+++aa++L+++ +++ainw+GG+hhakk+easGfcy+nD vl+il+l++k++r+ly+d+dlhhGDgve+af++
ENSVPAP00000010202.1 103 PATEGIFDYAAAVGGATITAAQCLIDGVCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSF 191
***************************************************************************************** PP
class-1.txt 182 tdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnls 270
t++vmtvs+hk++++ffPgtGd+sdvg +kg+yy+vnvP++dgi+De+y++i++sv+++v+ af+P+avvlq+GaD++agD++++fn++
ENSVPAP00000010202.1 192 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMT 280
***************************************************************************************** PP
class-1.txt 271 ikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
g+++c+k++ +++l++l+lGGGGY+l+n+aRcwty+t+v+l
ENSVPAP00000010202.1 281 PVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVIL 323
*****************************************97 PP
|
Protein Sequence
(Fasta) | MEEPEEPADS GQSLPPVYIY SPEYVSMCDS LAKVPKRXXX XXXXXXXXXX XXXXXIVKPK 60
VASMEEMATF HTDAYLQHLQ KVSQEGDDDH PDSIEYGLGY DCPATEGIFD YAAAVGGATI 120
TAAQCLIDGV CKVAINWSGG WHHAKKDEAS GFCYLNDAVL GILRLRRKFD RILYVDLDLH 180
HGDGVEDAFS FTSKVMTVSL HKFSPGFFPG TGDVSDVGLG KGRYYSVNVP IQDGIQDEKY 240
YHICESVLKE VYIAFNPKAV VLQLGADTIA GDPMCSFNMT PVGIGKCLKY ILQWQLATLI 300
LGGGGYNLAN TARCWTYLTG VILGKTLSSE IPDHEFFTAY GPDYVLEITP SCRPDRNEPH 360
RVQQILNYIK GNLKHVV 377Protein Fasta Sequence
>ENSVPAP00000010202.1|Class-I|Vicugna pacos
MEEPEEPADSGQSLPPVYIYSPEYVSMCDSLAKVPKRXXXXXXXXXXXXXXXXXXIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGVCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHVV |
Nucleotide Sequence
(Fasta) | ATGGAGGAGC CAGAGGAACC GGCAGACAGT GGGCAGTCAC TACCCCCGGT TTACATTTAC 60
AGTCCCGAGT ATGTTAGCAT GTGTGACTCT CTGGCCAAAG TCCCCAAACG GNNNNNNNNN 120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGATAGT TAAGCCCAAA 180
GTGGCCTCCA TGGAGGAGAT GGCCACTTTC CACACAGACG CCTATCTGCA GCATCTCCAG 240
AAGGTCAGCC AAGAAGGAGA TGATGATCAT CCAGACTCCA TAGAATATGG ATTAGGTTAT 300
GACTGCCCAG CCACCGAAGG GATATTTGAC TACGCAGCAG CTGTAGGAGG GGCTACAATC 360
ACAGCTGCCC AGTGCCTGAT TGATGGAGTG TGCAAAGTAG CAATCAACTG GTCCGGAGGG 420
TGGCATCATG CAAAGAAAGA TGAAGCATCT GGTTTTTGTT ATCTCAATGA TGCTGTCCTG 480
GGAATACTAC GATTGCGACG GAAATTTGAC CGTATTCTCT ATGTGGATTT GGATCTGCAC 540
CACGGAGACG GTGTAGAAGA TGCCTTCAGT TTCACCTCCA AAGTCATGAC AGTGTCCCTG 600
CACAAATTTT CCCCAGGATT TTTCCCAGGA ACAGGGGACG TGTCTGATGT TGGCCTAGGG 660
AAGGGACGGT ACTACAGTGT GAACGTGCCC ATTCAGGATG GCATACAGGA CGAGAAGTAT 720
TACCACATCT GCGAAAGTGT GCTAAAGGAG GTCTACATAG CCTTTAATCC AAAAGCAGTG 780
GTCCTACAGC TGGGAGCTGA TACAATAGCT GGGGATCCCA TGTGCTCCTT TAACATGACT 840
CCCGTGGGAA TTGGCAAGTG TCTTAAGTAC ATCCTTCAGT GGCAACTGGC AACACTCATT 900
TTGGGAGGAG GAGGCTATAA CCTTGCCAAC ACGGCTCGAT GCTGGACATA CTTGACCGGG 960
GTCATCCTAG GGAAAACACT ATCCTCTGAG ATCCCGGATC ATGAGTTTTT CACAGCATAT 1020
GGTCCTGATT ATGTGCTGGA AATCACGCCA AGCTGCCGGC CAGACCGCAA TGAGCCCCAC 1080
CGAGTCCAGC AAATCCTCAA CTACATCAAA GGGAATCTGA AGCATGTGGT CTAG
1135Nucleotide Fasta Sequence
>ENSVPAP00000010202.1|Class-I|Vicugna pacos
ATGGAGGAGCCAGAGGAACCGGCAGACAGTGGGCAGTCACTACCCCCGGTTTACATTTACAGTCCCGAGTATGTTAGCATGTGTGACTCTCTGGCCAAAGTCCCCAAACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAGTTAAGCCCAAAGTGGCCTCCATGGAGGAGATGGCCACTTTCCACACAGACGCCTATCTGCAGCATCTCCAGAAGGTCAGCCAAGAAGGAGATGATGATCATCCAGACTCCATAGAATATGGATTAGGTTATGACTGCCCAGCCACCGAAGGGATATTTGACTACGCAGCAGCTGTAGGAGGGGCTACAATCACAGCTGCCCAGTGCCTGATTGATGGAGTGTGCAAAGTAGCAATCAACTGGTCCGGAGGGTGGCATCATGCAAAGAAAGATGAAGCATCTGGTTTTTGTTATCTCAATGATGCTGTCCTGGGAATACTACGATTGCGACGGAAATTTGACCGTATTCTCTATGTGGATTTGGATCTGCACCACGGAGACGGTGTAGAAGATGCCTTCAGTTTCACCTCCAAAGTCATGACAGTGTCCCTGCACAAATTTTCCCCAGGATTTTTCCCAGGAACAGGGGACGTGTCTGATGTTGGCCTAGGGAAGGGACGGTACTACAGTGTGAACGTGCCCATTCAGGATGGCATACAGGACGAGAAGTATTACCACATCTGCGAAAGTGTGCTAAAGGAGGTCTACATAGCCTTTAATCCAAAAGCAGTGGTCCTACAGCTGGGAGCTGATACAATAGCTGGGGATCCCATGTGCTCCTTTAACATGACTCCCGTGGGAATTGGCAAGTGTCTTAAGTACATCCTTCAGTGGCAACTGGCAACACTCATTTTGGGAGGAGGAGGCTATAACCTTGCCAACACGGCTCGATGCTGGACATACTTGACCGGGGTCATCCTAGGGAAAACACTATCCTCTGAGATCCCGGATCATGAGTTTTTCACAGCATATGGTCCTGATTATGTGCTGGAAATCACGCCAAGCTGCCGGCCAGACCGCAATGAGCCCCACCGAGTCCAGCAAATCCTCAACTACATCAAAGGGAATCTGAAGCATGTGGTCTAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
