WERAM Information

Tag Content
WERAM ID WERAM-Pat-0022
Ensembl Protein ID ENSPTRP00000005182.3
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPTRG00000002937.4 ENSPTRT00000005601.3 ENSPTRP00000005182.3
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 4.90e-13 49.1 73 129
Organism Pan troglodytes
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++ ++++ +++ L++ +++ e +
  ENSPTRP00000005182.3  73 WKVGDKCMAIWSEDGQCYEAEI----EEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGR 129
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS 60
SDSFASTQPT HSWKVGDKCM AIWSEDGQCY EAEIEEIDEE NGTAAITFAG YGNAEVTPLL 120
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 180
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ 238
Nucleotide Sequence
(Fasta)		TCTGTCTTTT CCTCCTTCCA GTGTCCGGCG TTCCTCACTT CCCCCTCGCC GCCGACCGAG 60
TTCTTCCTTT TCAGACCGGG TCGCCTTGCT GTCGTCGCGG TGATTTTCCT GCTACTGCTA 120
CTGCTGCTGC TGCCGCCGCC ACTACCACTG GGCTCATTTG CCCCGACCCC TTCCCGCCGC 180
CCCGCCCCCA GCCCCACACA AGATGTCAGA GGATTTAGCA AAGCAGCTGG CAAGCTACAA 240
AGCTCAGCTC CAGCAAGTTG AAGCTGCATT ATCTGGAAAT GGAGAAAATG AAGATTTGCT 300
AAAATTGAAG AAAGATTTAC AAGAAGTTAT AGAACTAACC AAAGACCTTC TGTCAACTCA 360
ACCTTCTGAG ACGCTTGCAA GTTCAGACAG TTTTGCTTCT ACTCAACCTA CTCATTCATG 420
GAAAGTAGGA GACAAGTGTA TGGCAATCTG GAGTGAAGAT GGACAGTGTT ATGAAGCGGA 480
GATTGAGGAG ATAGATGAAG AAAATGGCAC CGCTGCAATC ACCTTTGCTG GTTATGGCAA 540
TGCTGAAGTG ACTCCACTGT TGAACCTCAA GCCTGTAGAA GAAGGAAGGA AGGCAAAGGA 600
GGACAGTGGC AACAAACCCA TGTCAAAAAA AGAAATGATT GCCCAGCAGC GTGAATATAA 660
AAAGAAGAAA GCTTTGAAAA AAGCTCAGAG AATAAAAGAA CTTGAGCAGG AAAGAGAGGA 720
CCAGAAAGTG AAATGGCAAC AATTCAACAA CAGAGCCTAT TCTAAAAACA AAAAAGGCCA 780
GGTAAAGAGG AGTATTTTTG CTTCACCTGA GAGTGTGACT GGTAAAGTTG GAGTAGGAAC 840
CTGTGGAATT GCTGATAAAC CTATGACACA ATATCAAGAT ACCTCTAAAT ACAATGTCAG 900
GCATTTGATG CCTCAATAAT CAGAAAAACT GTTGGATTTC ATCTCTGCAG GGCTTTACAT 960
TTACCTTTTT ATCCTTATAT TTTTCTAAAG GTAAATTATT TGTTAGATGA GTAAGCAAGA 1020
TACCATTGTC GTCATTGGTT GGGTTCAGTA GAATGAAACG TGAAGAAATT GCATTTGATA 1080
ACTGCTATTC ATTTAACTTT TCTCATTATC AGTACCACGG TTCCCTCAAA GTTTGTTGAA 1140
TAAAGCAACT TTTGTAGATG CTGTTTCATA CAGCACTTAG ATGAATTATT GATCTTCCTA 1200
ATATCAGGCG CCTACTTAAC CTATGGTATG TACTTTTTGT AAGTTGTAAC TTGAAATTTT 1260
CAGATGCTTT GAACTTGACA CATACTCTAG CAATTCATTG GAACACCAAG GCAAAAACAC 1320
CAACCTGCTA AAAGAGATCT TTTCATTTTT CTTATTTTCA GCTTTAAAAC TTAGCTGTCG 1380
TTCAGTTAAG CTTAAAGATA GGTTAATTTG TAAATGACAA AGTTTGTTTT GAGGTTTTTC 1440
CTCAATAACT TGTTTCCCAG CCCTATTAGG CCATCTCTAA AATTGATCTA GCTGTTTTAT 1500
TTTTATGTAC TCTTAGTTTT ATGTAAGAAA CCTTAGAATG AGCTCCCTTT TCTAAGGTGT 1560
TTTTGTTTTT TGTATGTTTG CTTTTTTCCT GTTTTTTGTT TTTTCCATTT ATGGCAGTGG 1620
TACCATGTTT TGGATGTGTG ATGTTTATAT GGGAGAACAA AAAGCTGATG TATAGCCCTG 1680
TATACAGTGT AGATACTATT TTTGTAAAAA CACAAGGCTA AATTAATGAA CAAGAATACT 1740
GAATATTTCA TCATTAAAAA TTTCTTGTAT TTCTTGTGCA TTAATCTGAC GATAATTTCC 1800
CTGTATATTA TGTTCATTTA GCTGTTTGTA ATTTTTGTTA ATTAGATCAG GTTGTCTGCA 1860
TTTGTTGGTG TAAGTGAACA TCATCACAGT TATCCTGAGT TGAGTTTAAG CCAAATACAT 1920
GCATAGAAAA GGGTCTTCCT ATTAATGGAA GAAGGTAATT TTTAGGATGT GTATTATTTC 1980
AGTTTTGTAT GTTTAACTTT TATTAAATAA AGTGTTTTTA AAATCTCC 2029
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 100 4e-120 427
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 100 4e-120 427
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 100 4e-120 427
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 100 4e-120 427
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 100 4e-120 427
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 100 4e-120 427
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 100 4e-120 427
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 100 4e-120 427
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 100 4e-120 427
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 100 7e-120 426
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 100 9e-120 426
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 100 1e-119 426
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 100 1e-119 426
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 100 1e-119 426
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 100 2e-119 425
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 100 2e-119 425
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 100 2e-119 425
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 99 2e-119 425
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 99 4e-119 424
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 100 4e-119 424
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 99 5e-119 424
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 99 5e-119 424
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 99 5e-119 424
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 100 9e-119 423
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 99 2e-118 422
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 99 2e-118 421
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 99 3e-118 421
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 98 2e-117 418
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 93 3e-113 404
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 96 5e-111 397
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 96 5e-111 397
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 96 7e-111 397
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 95 3e-109 391
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 97 6e-109 390
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 99 1e-102 369
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 99 2e-102 369
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 89 4e-101 364
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 84 4e-98 354
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 84 4e-95 344
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 96 6e-95 343
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 96 5e-92 334
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 98 6e-90 327
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 99 9e-90 327
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 76 1e-89 326
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 79 2e-89 325
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 76 1e-88 323
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 76 1e-88 323
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 74 5e-87 317
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 76 2e-86 315
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 75 4e-86 314
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 75 9e-86 313
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 76 3e-85 311
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 76 2e-84 309
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 80 2e-84 308
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 80 2e-84 308
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 79 7e-84 307
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 68 7e-76 280
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 53 2e-50 196
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 82 3e-49 192
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 58 4e-47 184
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 41 8e-25 111
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 31 8e-14 74.7
WERAM-Lab-0003 EDR15018 Laccaria bicolor 32 1e-13 73.6
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 30 3e-13 72.8
WERAM-Prp-0076 EMJ24376 Prunus persica 29 8e-12 67.8
WERAM-Met-0118 KEH32747 Medicago truncatula 28 2e-11 66.6
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 30 3e-11 65.9
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 30 3e-11 65.9
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 28 5e-11 65.1
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 28 7e-11 64.7
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 29 1e-10 64.3
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 29 1e-10 63.5
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 30 2e-10 63.2
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 30 2e-10 63.2
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 30 2e-10 63.2
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 30 2e-10 63.2
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 30 2e-10 63.2
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 30 2e-10 63.2
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 28 2e-10 63.2
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 28 2e-10 63.2
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 30 3e-10 62.8
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 27 3e-10 62.4
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 31 4e-10 62.0
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 29 6e-10 61.6
WERAM-Sei-0072 Si017933m Setaria italica 28 2e-09 59.7
WERAM-Viv-0076 VIT_12s0035g01830.t01 Vitis vinifera 27 1e-08 57.8
WERAM-Bro-0128 Bo7g080510.1 Brassica oleracea 28 1e-08 57.4
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 31 4e-08 55.5
WERAM-Orl-0027 KN538777.1_FGP011 Oryza longistaminata 30 1e-07 53.9
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 50 3e-07 52.8
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 30 3e-07 52.4
WERAM-Ors-0078 OS08T0109900-01 Oryza sativa 29 3e-07 52.4
WERAM-Tra-0312 Traes_7BL_DB71F86C2.1 Triticum aestivum 28 5e-07 52.0
WERAM-Pug-0026 EFP86213 Puccinia graminis 29 9e-07 51.2
WERAM-Tru-0060 TRIUR3_24898-P1 Triticum urartu 28 9e-07 51.2
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 52 2e-06 50.1
WERAM-Orp-0083 OPUNC08G00700.1 Oryza punctata 29 3e-06 49.7
Created Date 25-Jun-2016