| Tag |
Content |
| WERAM ID |
WERAM-Pes-0021 |
| Ensembl Protein ID |
ENSPSIP00000004581.1 |
| Gene Name |
HDAC8 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.70e-131 |
437.8 |
1 |
284 |
|
| Organism |
Pelodiscus sinensis |
| Domain Profile |
HDAC Class-I
class-1.txt 29 ltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLn 117
++h+L+ +y l ++++vkpk as ee+++fh+++y+++l+kv++e +++++ e+ ++++g+dcP ++g+f+y+++++Ga+++aa++L
ENSPSIP00000004581.1 1 MVHSLIKAYSLLDHMRLVKPKVASLEEMASFHTDAYLQHLQKVSEEGDDDHP-ESVEYGLGYDCPATEGVFDYAAAVGGATITAAQCLM 88
79***********************************************999.7789******************************** PP
class-1.txt 118 kkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsd 206
++++++ainw GG+hhakk+easGfcy+nD vl+il+l++k++r+lyid+dlhhGDgve+af++t++vmtvs+hk++++ffPgtGd++d
ENSPSIP00000004581.1 89 DGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGILHLRRKFDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTD 177
***************************************************************************************** PP
class-1.txt 207 vgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGG 295
vg +kg+yy+vnvPl+dg++De+y++i+++v+++v+ af+Peavvlq+GaD++agD++++fn++ g+++c+k+v +++l++lvlGGGG
ENSPSIP00000004581.1 178 VGLGKGRYYSVNVPLQDGVRDEKYYQICETVLKEVYTAFNPEAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLVLGGGG 266
***************************************************************************************** PP
class-1.txt 296 YtlrnvaRcwtyetavvl 313
Y+l+n+aRcwty+t+v++
ENSPSIP00000004581.1 267 YNLANTARCWTYLTGVIV 284
****************97 PP
|
Protein Sequence
(Fasta) | MVHSLIKAYS LLDHMRLVKP KVASLEEMAS FHTDAYLQHL QKVSEEGDDD HPESVEYGLG 60
YDCPATEGVF DYAAAVGGAT ITAAQCLMDG KCKVAINWPG GWHHAKKDEA SGFCYLNDAV 120
LGILHLRRKF DRILYIDLDL HHGDGVEDAF SFTSKVMTVS LHKFSPGFFP GTGDVTDVGL 180
GKGRYYSVNV PLQDGVRDEK YYQICETVLK EVYTAFNPEA VVLQLGADTI AGDPMCSFNM 240
TPVGIGKCLK YVLQWQLATL VLGGGGYNLA NTARCWTYLT GVIVGRTLSS EIPDHEFFTK 300
YGPDYVLEIT PSCRPDRNEP HRVQEILSTI KGNLKHVT 338Protein Fasta Sequence
>ENSPSIP00000004581.1|Class-I|Pelodiscus sinensis
MVHSLIKAYSLLDHMRLVKPKVASLEEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGVFDYAAAVGGATITAAQCLMDGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGILHLRRKFDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDVGLGKGRYYSVNVPLQDGVRDEKYYQICETVLKEVYTAFNPEAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQWQLATLVLGGGGYNLANTARCWTYLTGVIVGRTLSSEIPDHEFFTKYGPDYVLEITPSCRPDRNEPHRVQEILSTIKGNLKHVT |
Nucleotide Sequence
(Fasta) | GGTTTACAAA GCAGTGTGAG GTGCAGCCCC CCGCGCTGCG CTGCAAGGCC TGTGCCCGGC 60
CCGGCCCTGG TGCATGGCGC CGGGGGGGCT GGAGACGCGC CCTGCTCCCT GCAGGTGACG 120
GGCGCTCGCT GGCTGTGTCT GGCCGTTCAG ACCTGGCCAG GGAGCAGCCG GGAGCCTAGT 180
TTAGAACAAC CTGGCACAGA TCTGTTTTGC TTTGGCCAGC ATGGTGCATT CTTTGATCAA 240
AGCATATTCC TTACTGGACC ACATGAGGCT AGTCAAGCCC AAGGTGGCGT CCCTGGAGGA 300
AATGGCGAGC TTTCACACGG ATGCCTATCT GCAACACCTG CAGAAGGTCA GCGAGGAGGG 360
GGACGACGAC CACCCGGAGT CCGTGGAGTA CGGGCTGGGT TACGACTGCC CTGCTACTGA 420
AGGGGTCTTT GACTATGCAG CCGCTGTCGG AGGGGCCACC ATCACTGCAG CCCAGTGTCT 480
GATGGACGGC AAGTGCAAGG TAGCGATTAA CTGGCCTGGA GGGTGGCACC ATGCAAAGAA 540
AGACGAAGCG TCTGGCTTTT GCTACCTAAA CGACGCCGTG CTGGGCATTC TGCATCTGCG 600
TCGGAAATTT GATCGCATCC TCTACATCGA CTTGGACTTG CATCATGGGG ATGGGGTGGA 660
AGATGCCTTC AGTTTCACCT CCAAAGTCAT GACTGTGTCG CTGCATAAGT TTTCCCCAGG 720
ATTTTTCCCA GGAACAGGAG ATGTGACTGA CGTTGGCCTG GGGAAGGGGC GATATTACAG 780
TGTCAACGTA CCTCTCCAGG ATGGCGTTCG GGATGAGAAA TATTACCAGA TCTGCGAGAC 840
TGTGCTGAAG GAGGTGTACA CGGCGTTCAA CCCGGAAGCA GTAGTCCTCC AGCTGGGCGC 900
AGATACGATC GCTGGGGACC CCATGTGCTC ATTCAACATG ACTCCGGTGG GGATTGGCAA 960
GTGTCTGAAG TACGTTCTCC AGTGGCAGCT GGCGACTCTC GTCCTGGGCG GGGGAGGCTA 1020
CAACCTTGCC AACACAGCTC GCTGCTGGAC ATACTTGACT GGGGTCATCG TGGGGAGAAC 1080
ACTATCCTCC GAGATCCCTG ATCACGAGTT TTTCACAAAG TACGGTCCTG ATTACGTGCT 1140
GGAGATCACG CCGAGCTGCC GGCCAGACCG CAACGAGCCA CACAGAGTCC AAGAAATCCT 1200
CAGCACCATC AAAGGGAACC TGAAGCACGT CACTTAGCTG CCAAGGAGAG
1251Nucleotide Fasta Sequence
>ENSPSIP00000004581.1|Class-I|Pelodiscus sinensis
GGTTTACAAAGCAGTGTGAGGTGCAGCCCCCCGCGCTGCGCTGCAAGGCCTGTGCCCGGCCCGGCCCTGGTGCATGGCGCCGGGGGGGCTGGAGACGCGCCCTGCTCCCTGCAGGTGACGGGCGCTCGCTGGCTGTGTCTGGCCGTTCAGACCTGGCCAGGGAGCAGCCGGGAGCCTAGTTTAGAACAACCTGGCACAGATCTGTTTTGCTTTGGCCAGCATGGTGCATTCTTTGATCAAAGCATATTCCTTACTGGACCACATGAGGCTAGTCAAGCCCAAGGTGGCGTCCCTGGAGGAAATGGCGAGCTTTCACACGGATGCCTATCTGCAACACCTGCAGAAGGTCAGCGAGGAGGGGGACGACGACCACCCGGAGTCCGTGGAGTACGGGCTGGGTTACGACTGCCCTGCTACTGAAGGGGTCTTTGACTATGCAGCCGCTGTCGGAGGGGCCACCATCACTGCAGCCCAGTGTCTGATGGACGGCAAGTGCAAGGTAGCGATTAACTGGCCTGGAGGGTGGCACCATGCAAAGAAAGACGAAGCGTCTGGCTTTTGCTACCTAAACGACGCCGTGCTGGGCATTCTGCATCTGCGTCGGAAATTTGATCGCATCCTCTACATCGACTTGGACTTGCATCATGGGGATGGGGTGGAAGATGCCTTCAGTTTCACCTCCAAAGTCATGACTGTGTCGCTGCATAAGTTTTCCCCAGGATTTTTCCCAGGAACAGGAGATGTGACTGACGTTGGCCTGGGGAAGGGGCGATATTACAGTGTCAACGTACCTCTCCAGGATGGCGTTCGGGATGAGAAATATTACCAGATCTGCGAGACTGTGCTGAAGGAGGTGTACACGGCGTTCAACCCGGAAGCAGTAGTCCTCCAGCTGGGCGCAGATACGATCGCTGGGGACCCCATGTGCTCATTCAACATGACTCCGGTGGGGATTGGCAAGTGTCTGAAGTACGTTCTCCAGTGGCAGCTGGCGACTCTCGTCCTGGGCGGGGGAGGCTACAACCTTGCCAACACAGCTCGCTGCTGGACATACTTGACTGGGGTCATCGTGGGGAGAACACTATCCTCCGAGATCCCTGATCACGAGTTTTTCACAAAGTACGGTCCTGATTACGTGCTGGAGATCACGCCGAGCTGCCGGCCAGACCGCAACGAGCCACACAGAGTCCAAGAAATCCTCAGCACCATCAAAGGGAACCTGAAGCACGTCACTTAGCTGCCAAGGAGAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
