WERAM Information

Tag Content
WERAM ID WERAM-Mod-0084
Ensembl Protein ID ENSMODP00000013212.2
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMODG00000010542.3 ENSMODT00000013454.3 ENSMODP00000013212.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 5.20e-13 49.2 73 129
Organism Monodelphis domestica
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++ ++++ +++ L++ +++ e +
  ENSMODP00000013212.2  73 WKVGDKCMAVWSEDGQCYEAEI----EEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGR 129
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS 60
SDSFASAQPT HSWKVGDKCM AVWSEDGQCY EAEIEEIDEE NGTAAITFAG YGNAEVTPLL 120
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 180
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ 238
Nucleotide Sequence
(Fasta)		AGAATCAGAA TCCCGGCTCG TTTTTACAGG GAAGGATGTT GCCCTGCAAC TGTTGAATGA 60
CAATACAGGA ACAGCACTCG ATTCCCAAGC CAGGGTTTTT TCTCCCCACA ATGGCTTCGC 120
GGCCTCTGGT CATACATACT CCTGGACCCA AGTCGCCCCA CCTCACTTTT TGGTCCTTAC 180
ATTCCATCCC TTCCTCTCCA AATCTGTTCC CCATGACAGG AAACCCATCA GATCACTAGT 240
GAGGACATAG CCCAGGACAG GGGATTACTG ATTTTCGCTT TTCCACTGCC GACACTGGTT 300
TAAGCTACTT CCTCTCCCTC TGGGCCCCAA TGCTCTAATC CATACAATCT ACGTCACAGG 360
GCGGCCTAGA GGACAAAACA GAATCGGTGA AACAGGAGAC GGCGAGACTA GACTCTCGCC 420
CTCACCACCC CCGAACTACC AACCGCCCAA CCTTCCAACC GCCGCCAACT CAATATCGGA 480
AGTGACGCAG ACACATCTTA CTGCCCCTCG CCAACCGTAA CTTTCTTTCT ACGTAACTTC 540
CTTAAACCTT GCTGTCTCCT AAGGCCCAAG ACAGAGACGA GATTCACTAG CGGAAATCAC 600
GCGAATAGTC TGTCGCCTCG CGAGGCGTAG GGAATATCGC GAGATTTATT TCACGTCTTC 660
GTCTCTCTCT TCCTCTCTTC CTCTGCCCGC TCTGCTCTTC CCCTCCCCCT CCATACCGAC 720
CGACAGCCTC ATCCTCTCAG CGCCGGGTTG AGTCGTCGCC GCCGCCGCCG CCGCCGCCGC 780
TGAAGAAGAG AGCCTGTAGC TGCTGCTGTG TTCACCGTCT GACCTCGCTG CCTCACCTTT 840
TGCTGCCGCC GCCGCCTCGG CTTCGGCCCC GGCTCCGGCC CCGGCCTTAT ACAAGATGTC 900
TGAAGATCTA GCAAAGCAGC TGGCTAGCTA CAAGGCTCAG CTTCAACAAG TTGAGGCAGC 960
ATTATCTGGA AATGGAGAAA ATGAAGACTT GCTAAAATTG AAAAAAGATT TGCAGGAAGT 1020
TATAGAACTA ACCAAAGATC TTCTTTCAAC CCAACCTTCG GAAACACTTG CAAGTTCAGA 1080
CAGTTTTGCT TCTGCTCAGC CCACTCACTC CTGGAAAGTA GGAGACAAAT GTATGGCAGT 1140
CTGGAGTGAA GATGGACAGT GTTATGAAGC AGAGATTGAG GAGATAGATG AAGAAAACGG 1200
AACTGCTGCC ATCACATTTG CTGGTTATGG TAATGCTGAA GTCACACCTC TACTCAATTT 1260
GAAGCCGGTG GAAGAAGGAA GGAAGGCAAA AGAGGACAGT GGAAATAAGC CCATGTCAAA 1320
AAAAGAAATG ATTGCCCAGC AACGAGAATA TAAAAAGAAG AAAGCATTGA AAAAAGCTCA 1380
GAGAATAAAA GAACTTGAAC AGGAAAGAGA AGATCAGAAG GTGAAATGGC AACAGTTCAA 1440
CAATAGAGCT TATTCTAAAA ACAAAAAAGG CCAGGTGAAA AGGAGTATTT TTGCCTCACC 1500
TGAGAGTGTA ACTGGCAAAG TTGGAGTAGG AACTTGTGGA ATTGCTGATA AACCCATGAC 1560
ACAGTATCAA GATACCTCTA AATACAATGT CAGGCATTTG ATGCCTCAGT AATCAGAGAA 1620
ACTGGTGGAT TTCATCTCTG CAGGGCTTTA CATTTACCTT TTTATCCTTA TATTTTTCTA 1680
AAGGTAAATT ATTTGTTAGA TAGTAAGGAA GAGACTCATT GTCATCATCT GACTTCAAAC 1740
AATAGAATGA GACTTGAAGA AATTGCATTT GATAACTGCT TTTCAGTTGA CTTTCTTCAT 1800
TACTACCATT TTCCCCAGAA TTTATCCTGT AATGCAACTT TTGTAGACAG ACGCTGCCTA 1860
AATACAGCAC TTAGATGAAG TGTTTATCTT CCAGATATCA GACTTTGCCA CATACCTAAG 1920
AGTTTTATCC TTTCCAAGTC ATAACTTGCA AGATGCTTTG AATTTGCCAC GTATTCCAGC 1980
AGCCTTTGGA GCTTCATGGT AAATCACCAT CCTGCTGAGC AGATTTCCAA CTTGTTCTAA 2040
CTTCAGTTTA TACCCAAATT GTTGTCATCA AATTATGCCT AGATACAGGT CCATTTGTGG 2100
ATGGCAAAGT TTGTTGTGAA GTTTTTCTCC CCAATAACTT CTTGAGTCTC TAGCCTTTTT 2160
CTGGAATGAC TTCAATCCTC TTACACTTTT CATTGAGACT TTATTTTGTG TGAGAAACCA 2220
TGTTGAAGAC CAGCTACCTT TTATAAGTTT TGTACCTGTT TGTTTTTCTC CTCTGTTGAT 2280
TTTTGCTTCT GGTAGTGGTG CCACCTTTGG ATGTGTAATG TTTATATGAG AAAAAAAAAA 2340
GCTAATGTAT AGCCCTGTAT ACAATGTAGA TATTATTTTT GTAAAGACTA AGGCTGAATT 2400
AATGAACAAG AGTACTCTGA ATGTTTTCAC CATTAAATTC TACTGTATTT CTTGTGCATT 2460
AATCTGACCA TAATTTCCTT GTATATTATG TTCATGTAGC TGAGTTTGTA ATTTTTGTTA 2520
ACTAGATCAG GTTGTCAGCA TTCATTGATG CAAGTGACCA TCACAATTAC CTGAGTTGCA 2580
TTCAGTTCAA GCTAATATAT GCAACTGATA GTTTAGAATG ACATGCATAG AAAAAGGTAC 2640
TTCCTATTAA TGGAAGATGG TGATTTTTAT GACAAATGTG TTAATTTCAG TTTTGTATGT 2700
TTAACTTTTA TTAAATAAAG TGTTTTTAAA ATCTCTAGCA TGTGTGTAGA AAAGAAGTAG 2760
TCATGGGCTC TTATACTCAT TCTAGTAATT AAGACTGAAT TTTTAAAAAT TGGCTACGGA 2820
GAGAATTTGG TGATGTGAGG ATAGTGATTT TTTTTTAAAA CAAATCCCCC TTAAAAATTC 2880
TATTTCTTAG AGAGAAACAG TGGGGTTTTA GAGGGAGAGA CTATGCTTTT TGAGAAGAAA 2940
AGACATGATT TAATGAAGTT TTGTTGGGGA TTCATGGGGC AGGAGAAGAA TAGGAGGAAA 3000
AATGGCAAGA GTATATTTAA ATTTTATAAA CCTTGTTCTA TTGACAGATG GCAACTGCTC 3060
CCCTGAATGA GTCAAAAGAT AGAACTTCTC TCCTACTACC AACCCTAGAA GAGAGAACTT 3120
TATGTTACCA TGGGCTAGTC AGGCAGAACA GATGGACTAG AAAGTTAAGA TGGAAAATTC 3180
CAAATATGCT TAAACAGAGA AGGCTCAAAC CCAGC 3216
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 100 8e-120 426
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 100 2e-119 425
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 99 2e-119 425
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 99 2e-119 425
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 99 2e-119 425
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 99 2e-119 425
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 99 2e-119 425
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 99 2e-119 425
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 99 2e-119 425
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 99 2e-119 425
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 99 2e-119 425
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 99 2e-119 425
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 99 5e-119 424
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 99 8e-119 423
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 99 8e-119 423
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 99 9e-119 423
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 99 9e-119 423
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 99 9e-119 423
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 99 1e-118 422
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 98 2e-118 422
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 99 2e-118 422
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 98 2e-118 421
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 99 2e-118 421
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 98 3e-118 421
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 98 3e-118 421
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 99 4e-118 421
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 99 4e-118 421
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 99 6e-118 420
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 92 2e-112 402
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 96 8e-111 396
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 96 8e-111 396
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 96 1e-110 396
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 95 2e-109 392
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 98 4e-109 390
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 100 4e-103 371
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 99 7e-103 370
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 88 2e-100 362
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 84 3e-98 355
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 84 3e-95 345
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 96 9e-95 343
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 96 8e-92 333
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 76 2e-89 325
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 98 2e-89 325
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 79 2e-89 325
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 77 3e-89 325
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 98 5e-89 324
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 76 9e-89 323
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 74 3e-87 318
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 76 2e-86 315
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 75 2e-86 315
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 75 8e-86 313
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 76 3e-85 311
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 77 5e-85 311
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 80 2e-84 309
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 80 2e-84 309
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 79 7e-84 307
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 68 6e-76 280
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 53 2e-50 196
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 83 8e-50 194
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 59 4e-47 185
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 41 6e-25 111
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 31 5e-14 75.1
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 31 6e-14 75.1
WERAM-Lab-0003 EDR15018 Laccaria bicolor 32 1e-13 73.9
WERAM-Prp-0076 EMJ24376 Prunus persica 29 6e-12 68.2
WERAM-Met-0118 KEH32747 Medicago truncatula 29 1e-11 67.0
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 29 1e-11 67.0
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 30 3e-11 66.2
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 30 3e-11 66.2
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 29 3e-11 65.9
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 29 4e-11 65.9
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 30 7e-11 64.7
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 29 8e-11 64.7
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 29 9e-11 64.3
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 30 2e-10 63.5
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 30 2e-10 63.5
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 30 2e-10 63.5
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 30 2e-10 63.5
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 30 2e-10 63.5
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 30 2e-10 63.5
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 29 2e-10 63.5
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 27 3e-10 62.8
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 31 3e-10 62.8
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 29 5e-10 62.0
WERAM-Viv-0076 VIT_12s0035g01830.t01 Vitis vinifera 27 2e-09 60.1
WERAM-Sei-0072 Si017933m Setaria italica 29 2e-09 60.1
WERAM-Bro-0128 Bo7g080510.1 Brassica oleracea 28 7e-09 58.2
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 32 2e-08 56.6
WERAM-Orl-0027 KN538777.1_FGP011 Oryza longistaminata 30 1e-07 54.3
WERAM-Pug-0026 EFP86213 Puccinia graminis 29 2e-07 53.1
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 30 2e-07 53.1
WERAM-Ors-0078 OS08T0109900-01 Oryza sativa 30 3e-07 52.8
WERAM-Tra-0312 Traes_7BL_DB71F86C2.1 Triticum aestivum 28 4e-07 52.4
WERAM-Tru-0060 TRIUR3_24898-P1 Triticum urartu 28 8e-07 51.2
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 48 1e-06 50.4
WERAM-Orp-0083 OPUNC08G00700.1 Oryza punctata 30 2e-06 49.7
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 50 3e-06 49.7
Created Date 25-Jun-2016