| Tag |
Content |
| WERAM ID |
WERAM-Dio-0136 |
| Ensembl Protein ID |
ENSDORP00000012792.1 |
| Gene Name |
Hdac8 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.40e-116 |
387.2 |
16 |
323 |
|
| Organism |
Dipodomys ordii |
| Domain Profile |
HDAC Class-I
class-1.txt 3 vayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91
+y+y+++ +++++++ +++pkr+s++h+L+ +y+l+k+++ivkpk as+ee+++fh+++y+++l+k+++e +e+++ ++ ++++g++
ENSDORP00000012792.1 16 PVYIYSPE--YVSVCDSLTKVPKRASMVHSLIEAYALHKHMRIVKPKVASMEEMATFHTDAYLQHLQKISQEGDEDHP-DSIEYGLGYN 101
67999998..8899**************************************************************99.6789****** PP
class-1.txt 92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafy 180
cP ++g+fe++++++Ga+++aa++L+++ +++ainwaGG+hha k+easGfcy+nD vl+il+l++k++r+ly+d+dlhhGD
ENSDORP00000012792.1 102 CPATEGIFEFAAAVGGATITAAQCLIDGICKVAINWAGGWHHANKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDXXXXXXX 190
***************************************************************************************99 PP
class-1.txt 181 ttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnl 269
tGd+sdvg +kg+yy+vnvP++dgi+De+y++i++sv+++v+++f+P+avvlq+GaD++agD++++fn+
ENSDORP00000012792.1 191 XXXXXXXXXXXXXXXXXXXXTGDVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYQVFNPTAVVLQLGADTIAGDPMCSFNM 279
99999999999999999************************************************************************ PP
class-1.txt 270 sikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+ g+++c+k++ +++l++l+lGGGGY+l+n+aRcwty+t+v+l
ENSDORP00000012792.1 280 TPVGLGNCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVIL 323
******************************************97 PP
|
Protein Sequence
(Fasta) | MDKPQSQGKG GKPLRPVYIY SPEYVSVCDS LTKVPKRASM VHSLIEAYAL HKHMRIVKPK 60
VASMEEMATF HTDAYLQHLQ KISQEGDEDH PDSIEYGLGY NCPATEGIFE FAAAVGGATI 120
TAAQCLIDGI CKVAINWAGG WHHANKDEAS GFCYLNDAVL GILRLRRKFE RILYVDLDLH 180
HGDXXXXXXX XXXXXXXXXX XXXXXXXXXX TGDVSDVGLG KGRYYSVNVP IQDGIQDERY 240
YHICESVLKE VYQVFNPTAV VLQLGADTIA GDPMCSFNMT PVGLGNCLKY ILQWQLATLI 300
LGGGGYNLAN TARCWTYLTG VILGKTLSSE IPDHEFFTAY GPDYVLEITP SCRPDRNEPH 360
QIQKILNYIK GNLKHVV 377Protein Fasta Sequence
>ENSDORP00000012792.1|Class-I|Dipodomys ordii
MDKPQSQGKGGKPLRPVYIYSPEYVSVCDSLTKVPKRASMVHSLIEAYALHKHMRIVKPKVASMEEMATFHTDAYLQHLQKISQEGDEDHPDSIEYGLGYNCPATEGIFEFAAAVGGATITAAQCLIDGICKVAINWAGGWHHANKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYQVFNPTAVVLQLGADTIAGDPMCSFNMTPVGLGNCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHQIQKILNYIKGNLKHVV |
Nucleotide Sequence
(Fasta) | ATGGACAAAC CACAGTCCCA AGGAAAGGGT GGGAAGCCGC TGCGCCCTGT TTACATTTAC 60
AGTCCGGAGT ATGTCAGCGT GTGCGACTCC CTGACCAAGG TTCCCAAGCG GGCCAGTATG 120
GTCCATTCTC TGATTGAAGC ATATGCACTG CATAAGCACA TGAGGATAGT GAAGCCCAAA 180
GTGGCCTCCA TGGAGGAGAT GGCCACCTTC CACACTGATG CCTACCTACA GCATCTCCAG 240
AAGATCAGCC AAGAAGGGGA CGAGGATCAT CCCGACTCCA TAGAATATGG ACTAGGTTAC 300
AATTGCCCAG CCACTGAAGG GATATTTGAA TTTGCTGCAG CAGTAGGAGG GGCTACAATC 360
ACAGCTGCCC AGTGCCTGAT TGATGGGATA TGTAAAGTAG CAATTAACTG GGCCGGAGGG 420
TGGCATCATG CAAATAAAGA TGAAGCATCT GGTTTTTGTT ATCTCAATGA TGCTGTCCTG 480
GGAATATTAC GATTGCGACG GAAATTTGAA CGTATTCTCT ATGTGGATTT GGATCTGCAC 540
CATGGCGATG NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 600
NNNNNNNNNN NNNNNNNNNN NNNNNNNNGT ACAGGTGATG TGTCTGATGT AGGCTTAGGG 660
AAAGGACGCT ACTACAGTGT GAATGTGCCT ATTCAGGATG GCATACAGGA CGAGAGGTAT 720
TACCACATCT GTGAAAGTGT ACTAAAGGAG GTATACCAAG TCTTTAATCC TACAGCAGTG 780
GTCTTACAGC TGGGAGCAGA TACGATAGCT GGAGATCCCA TGTGCTCCTT TAATATGACT 840
CCAGTGGGGC TTGGCAATTG TCTTAAGTAT ATCCTTCAGT GGCAACTGGC AACACTCATT 900
TTAGGAGGAG GAGGCTATAA CCTTGCCAAC ACAGCTCGTT GCTGGACATA TTTGACCGGG 960
GTCATCCTAG GGAAAACACT ATCCTCTGAG ATCCCAGATC ATGAGTTTTT CACAGCATAT 1020
GGTCCTGATT ATGTGCTGGA AATCACGCCA AGCTGCCGGC CAGACCGCAA TGAGCCCCAC 1080
CAAATCCAGA AAATCCTCAA CTACATCAAA GGCAATCTGA AGCATGTGGT CTAA
1135Nucleotide Fasta Sequence
>ENSDORP00000012792.1|Class-I|Dipodomys ordii
ATGGACAAACCACAGTCCCAAGGAAAGGGTGGGAAGCCGCTGCGCCCTGTTTACATTTACAGTCCGGAGTATGTCAGCGTGTGCGACTCCCTGACCAAGGTTCCCAAGCGGGCCAGTATGGTCCATTCTCTGATTGAAGCATATGCACTGCATAAGCACATGAGGATAGTGAAGCCCAAAGTGGCCTCCATGGAGGAGATGGCCACCTTCCACACTGATGCCTACCTACAGCATCTCCAGAAGATCAGCCAAGAAGGGGACGAGGATCATCCCGACTCCATAGAATATGGACTAGGTTACAATTGCCCAGCCACTGAAGGGATATTTGAATTTGCTGCAGCAGTAGGAGGGGCTACAATCACAGCTGCCCAGTGCCTGATTGATGGGATATGTAAAGTAGCAATTAACTGGGCCGGAGGGTGGCATCATGCAAATAAAGATGAAGCATCTGGTTTTTGTTATCTCAATGATGCTGTCCTGGGAATATTACGATTGCGACGGAAATTTGAACGTATTCTCTATGTGGATTTGGATCTGCACCATGGCGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGTGATGTGTCTGATGTAGGCTTAGGGAAAGGACGCTACTACAGTGTGAATGTGCCTATTCAGGATGGCATACAGGACGAGAGGTATTACCACATCTGTGAAAGTGTACTAAAGGAGGTATACCAAGTCTTTAATCCTACAGCAGTGGTCTTACAGCTGGGAGCAGATACGATAGCTGGAGATCCCATGTGCTCCTTTAATATGACTCCAGTGGGGCTTGGCAATTGTCTTAAGTATATCCTTCAGTGGCAACTGGCAACACTCATTTTAGGAGGAGGAGGCTATAACCTTGCCAACACAGCTCGTTGCTGGACATATTTGACCGGGGTCATCCTAGGGAAAACACTATCCTCTGAGATCCCAGATCATGAGTTTTTCACAGCATATGGTCCTGATTATGTGCTGGAAATCACGCCAAGCTGCCGGCCAGACCGCAATGAGCCCCACCAAATCCAGAAAATCCTCAACTACATCAAAGGCAATCTGAAGCATGTGGTCTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
