WERAM Information

Tag Content
WERAM ID WERAM-Dio-0058
Ensembl Protein ID ENSDORP00000005294.1
Gene Name Smndc1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDORG00000005657.1 ENSDORT00000005657.1 ENSDORP00000005294.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 4.60e-13 48.9 73 129
Organism Dipodomys ordii
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++ ++++ +++ L++ +++ e +
  ENSDORP00000005294.1  73 WKVGDKCMAIWSEDGQCYEAEI----EEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGR 129
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS 60
SDSFASTQPT HSWKVGDKCM AIWSEDGQCY EAEIEEIDEE NGTAAITFAG YGNAEVTPLL 120
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELXXX XXXXXXXXXX 180
XXXXXXXXXX XXXVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ 238
Nucleotide Sequence
(Fasta)		ATGTCAGAGG ATCTAGCAAA GCAGCTGGCA AGCTACAAAG CCCAACTACA ACAAGTAGAA 60
GCTGCACTGT CTGGAAATGG AGAAAATGAA GATTTGTTAA AACTGAAGAA AGATTTACAA 120
GAAGTTATAG AACTAACCAA AGACCTTCTG TCAACTCAAC CTTCAGAAAC ACTTGCAAGT 180
TCGGACAGTT TTGCTTCTAC TCAGCCCACT CATTCATGGA AAGTAGGAGA CAAGTGTATG 240
GCAATCTGGA GTGAAGATGG ACAGTGTTAT GAAGCGGAGA TCGAGGAGAT AGACGAAGAA 300
AATGGCACCG CTGCAATCAC CTTTGCTGGT TATGGCAATG CTGAAGTGAC TCCACTGTTG 360
AATCTGAAGC CTGTAGAAGA AGGCCGGAAG GCAAAGGAGG ACAGTGGCAA CAAACCCATG 420
TCAAAAAAAG AAATGATTGC CCAGCAGCGT GAATATAAAA AGAAGAAGGC TTTGAAGAAA 480
GCACAGAGAA TAAAAGAACT NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 540
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNG TAAAGAGGAG TATTTTTGCT 600
TCACCAGAGA GTGTAACTGG CAAAGTCGGC GTAGGAACTT GTGGAATTGC TGATAAACCC 660
ATGACACAAT ATCAAGATAC CTCTAAATAC AATGTCAGGC ATTTGATGCC TCAATAA 718
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 89 3e-101 364
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 89 4e-101 364
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 89 4e-101 364
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 89 4e-101 364
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 89 4e-101 364
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 89 4e-101 364
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 89 4e-101 364
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 89 4e-101 364
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 89 4e-101 364
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 89 4e-101 364
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 89 4e-101 364
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 89 7e-101 363
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 89 9e-101 363
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 89 1e-100 362
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 89 1e-100 362
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 89 1e-100 362
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 89 1e-100 362
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 89 2e-100 362
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 89 2e-100 362
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 88 3e-100 361
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 88 3e-100 361
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 88 7e-100 360
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 88 7e-100 360
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 89 9e-100 360
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 89 1e-99 359
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 88 2e-99 358
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 88 3e-99 358
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 88 4e-99 357
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 87 3e-98 355
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 82 2e-94 342
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 85 6e-92 333
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 85 6e-92 333
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 85 7e-92 333
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 84 3e-90 328
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 87 3e-90 328
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 86 1e-83 306
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 86 2e-83 305
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 73 8e-79 290
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 74 4e-77 284
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 83 3e-76 281
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 98 6e-74 274
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 99 8e-74 273
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 83 4e-73 271
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 66 2e-72 269
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 66 2e-72 268
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 69 1e-71 266
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 66 8e-71 263
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 64 3e-70 261
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 66 4e-70 261
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 66 2e-69 259
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 65 8e-69 257
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 66 3e-68 255
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 66 9e-67 250
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 69 2e-65 246
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 69 2e-65 246
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 68 7e-65 244
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 60 5e-62 234
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 82 3e-49 192
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 55 1e-45 180
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 51 2e-35 146
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 38 1e-18 90.5
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 35 4e-11 65.5
WERAM-Lab-0003 EDR15018 Laccaria bicolor 37 2e-10 63.2
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 35 1e-09 60.5
WERAM-Prp-0076 EMJ24376 Prunus persica 32 4e-09 58.9
WERAM-Met-0118 KEH32747 Medicago truncatula 31 8e-09 57.8
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 31 4e-08 55.8
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 31 5e-08 55.5
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 31 1e-07 54.3
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 31 3e-07 52.8
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 50 3e-07 52.8
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 30 5e-07 52.0
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 30 7e-07 51.6
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 32 7e-07 51.6
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 32 7e-07 51.6
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 32 7e-07 51.6
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 32 7e-07 51.6
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 32 7e-07 51.6
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 32 7e-07 51.6
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 31 1e-06 50.4
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 30 1e-06 50.4
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 52 2e-06 50.1
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 31 3e-06 49.3
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 30 5e-06 48.5
WERAM-Sei-0072 Si017933m Setaria italica 29 6e-06 48.1
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 29 7e-06 48.1
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 29 8e-06 48.1
Created Date 25-Jun-2016