WERAM Information

Tag Content
WERAM ID WERAM-Cap-0079
Ensembl Protein ID ENSCPOP00000005709.2
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000006335.3 ENSCPOT00000006400.2 ENSCPOP00000005709.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 4.40e-13 49.3 73 129
Organism Cavia porcellus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++ ++++ +++ L++ +++ e +
  ENSCPOP00000005709.2  73 WKVGDKCMAIWSEDGQCYEAEI----EEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGR 129
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLTS 60
SDSFASTQPT HSWKVGDKCM AIWSEDGQCY EAEIEEIDEE NGTAAITFAG YGNAEVTPLL 120
NLKPVEEGRK AKEDSGSKPM SKKEMIAQQR ELEQEREDQK VKWQQFNNRA YSKNKKGQVK 180
RSIFASPESV TGKVGVGTCG IADKPMTQYQ DTSKYNVRHL MPQ 223
Nucleotide Sequence
(Fasta)		ATGTCAGAGG ATCTAGCAAA GCAACTGGCA AGTTACAAAG CTCAACTGCA GCAAGTAGAA 60
GCTGCATTAT CTGGAAATGG AGAAAATGAA GATTTGCTAA AATTGAAGAA AGATTTACAA 120
GAAGTTATAG AATTAACCAA AGACCTTCTG TCAACTCAAC CTTCAGAAAC TCTTACAAGT 180
TCCGACAGTT TTGCTTCTAC TCAGCCCACT CATTCATGGA AAGTAGGAGA CAAGTGTATG 240
GCAATCTGGA GTGAAGATGG ACAGTGTTAC GAAGCGGAGA TCGAGGAGAT AGATGAGGAA 300
AACGGCACCG CTGCAATCAC CTTTGCTGGT TATGGCAATG CTGAAGTGAC TCCACTGTTG 360
AACCTCAAGC CTGTAGAAGA AGGAAGGAAG GCAAAGGAGG ACAGTGGCAG CAAACCCATG 420
TCAAAAAAAG AAATGATTGC CCAACAGCGT GAACTTGAGC AAGAAAGAGA AGACCAGAAG 480
GTTAAATGGC AGCAATTCAA CAACAGAGCC TATTCTAAAA ATAAAAAAGG CCAGGTAAAG 540
AGGAGTATTT TTGCTTCACC TGAAAGTGTA ACTGGCAAAG TTGGAGTAGG AACTTGTGGA 600
ATTGCTGATA AACCTATGAC ACAGTATCAA GATACTTCTA AATACAATGT GAGGCATTTG 660
ATGCCTCAAT AA 673
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 94 5e-106 380
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 93 2e-105 379
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 93 2e-105 379
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 93 2e-105 378
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 93 3e-105 377
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 93 6e-105 377
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 93 6e-105 377
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 93 6e-105 377
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 93 6e-105 377
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 93 6e-105 377
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 93 6e-105 377
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 93 6e-105 377
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 93 6e-105 377
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 93 6e-105 377
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 93 6e-105 377
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 92 8e-105 376
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 92 1e-104 375
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 92 1e-104 375
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 92 1e-104 375
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 92 1e-104 375
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 92 2e-104 375
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 92 2e-104 375
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 92 3e-104 374
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 92 4e-104 374
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 92 5e-104 374
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 92 6e-104 373
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 93 6e-104 373
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 93 1e-103 372
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 92 2e-103 371
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 89 2e-96 348
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 89 2e-96 348
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 89 2e-96 348
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 89 2e-95 345
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 90 1e-94 342
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 82 1e-90 329
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 91 3e-87 318
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 90 4e-87 317
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 78 4e-84 307
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 79 2e-82 301
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 88 2e-80 295
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 87 2e-77 286
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 71 2e-77 285
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 73 2e-77 285
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 71 6e-77 284
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 71 1e-75 279
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 90 4e-75 278
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 91 5e-75 277
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 71 1e-74 276
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 69 3e-74 275
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 70 3e-74 275
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 70 8e-74 273
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 71 3e-73 271
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 72 2e-72 268
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 73 4e-70 261
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 73 4e-70 261
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 72 1e-69 259
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 62 5e-64 241
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 81 1e-48 189
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 53 2e-47 186
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 52 2e-39 159
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 38 1e-19 93.6
WERAM-Lab-0003 EDR15018 Laccaria bicolor 30 8e-12 67.8
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 29 2e-11 66.2
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 35 6e-11 65.1
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 31 6e-10 61.6
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 29 2e-09 60.1
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 28 2e-09 59.7
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 28 2e-09 59.7
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 28 2e-09 59.7
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 28 2e-09 59.7
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 28 2e-09 59.7
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 28 2e-09 59.7
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 27 2e-09 59.3
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 27 3e-09 59.3
WERAM-Met-0118 KEH32747 Medicago truncatula 31 4e-09 58.5
WERAM-Prp-0076 EMJ24376 Prunus persica 31 4e-09 58.5
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 29 6e-09 58.2
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 27 7e-09 58.2
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 26 1e-08 57.4
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 29 2e-08 56.6
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 28 2e-08 56.2
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 31 3e-08 55.8
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 27 4e-08 55.5
WERAM-Sei-0072 Si017933m Setaria italica 27 1e-07 53.5
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 50 2e-07 53.1
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 25 3e-07 52.8
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 28 9e-07 50.8
WERAM-Pug-0026 EFP86213 Puccinia graminis 27 1e-06 50.8
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 52 1e-06 50.4
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 31 3e-06 49.3
Created Date 25-Jun-2016