WERAM Information

Tag Content
WERAM ID WERAM-Sem-0061
Ensembl Protein ID EFJ07202
Gene Name SELMODRAFT_272232
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SELMODRAFT_272232 EFJ07202 EFJ07202
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 1.00e-14 77
Organism Selaginella moellendorffii
Domain Profile
  HDAC HD2
Query: 1  MEFWGVKVLPSKSIKCPVEDSSYLHISNAALGEVGSSAKNERVILRLKTQGEEIVLGTLI 60
          MEFWGV V P  + K   E+ S +HIS A+L     S   E V+L +   G ++V+GTL 
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSG--ESVVLSVTVGGAKLVIGTLS 58
Query: 61 PGQRDHIALDLIISKSFQLSHNSSTLAVHFSGYRT 95
            +   I+ DL+  K F+LSH+ +   VHF GY++
Sbjct: 59 QDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKS 93
Protein Sequence
(Fasta)		MEFWGVKVLP SKSIKCPVED SSYLHISNAA LGEVGSSAKN ERVILRLKTQ GEEIVLGTLI 60
PGQRDHIALD LIISKSFQLS HNSSTLAVHF SGYRTEGSGE LQELDREHDH GVRKENGNVK 120
VPLGSSDSDS ESDSDDDDDD DDDDDGDDDD DDDDDEDDDE VNAKDLALRQ AMFLQMESDD 180
DDDDDIDEGD DDDNDDDDDD DDDDEEIDEE DLRARLMGKK RAPAALTPPA QKKIKTPSGK 240
TPTAPKSGKK DLSAAEAVAK TPKSSGKKEK DKKKEKATPA TPNSETKKAG GQHHCGICSR 300
NFANEAALTQ HNTAKHK 317
Nucleotide Sequence
(Fasta)		TAGGGCTAGG GTTTAAGGCA CGGCGCGGCT ATGGAGTTTT GGGGCGTCAA GGTCTTACCA 60
TCCAAGTCTA TCAAGTGCCC AGTGGAGGAT TCGAGCTATT TGCACATCTC GAATGCTGCT 120
TTGGGCGAGG TGGGATCATC CGCCAAGAAT GAACGCGTGA TCTTGCGACT TAAGACGCAA 180
GGCGAGGAGA TTGTTTTGGG CACGCTCATA CCCGGCCAAC GCGATCATAT CGCGCTAGAC 240
TTGATCATTA GCAAGTCTTT CCAGCTCTCG CACAACAGCA GTACGCTGGC TGTGCACTTC 300
TCGGGCTACA GAACGGAAGG GTCGGGCGAG CTTCAGGAGC TGGATAGGGA ACATGACCAT 360
GGTGTCCGGA AGGAAAACGG AAATGTCAAA GTTCCGTTAG GCTCGAGCGA TAGCGATAGC 420
GAGAGCGACA GCGATGACGA TGATGACGAC GACGACGATG ATGACGGCGA CGACGACGAC 480
GACGACGACG ATGATGAGGA CGACGATGAG GTCAACGCGA AGGATCTTGC CTTGCGGCAA 540
GCGATGTTCT TGCAGATGGA AAGTGATGAC GATGACGACG ACGACATTGA TGAGGGCGAC 600
GATGATGACA ACGACGACGA CGATGACGAT GATGACGACG ATGAGGAAAT TGATGAGGAG 660
GATCTTAGAG CTCGCCTGAT GGGAAAGAAG AGAGCTCCGG CAGCTCTTAC GCCACCGGCT 720
CAAAAGAAGA TCAAAACGCC ATCAGGGAAA ACGCCAACAG CACCAAAGTC AGGTAAGAAA 780
GATTTATCAG CCGCTGAGGC TGTGGCAAAG ACTCCAAAGT CCTCGGGCAA AAAGGAGAAG 840
GACAAGAAAA AGGAAAAGGC GACTCCTGCT ACTCCTAATT CGGAGACGAA GAAGGCTGGC 900
GGGCAACATC ACTGTGGCAT ATGTTCGCGG AATTTTGCCA ATGAGGCTGC TCTTACGCAA 960
CACAACACAG CGAAGCATAA GTAGTGTGAG GCAGAAGAGT TGTACGACAC GCGAGTTAGT 1020
GTCTGCTCTT GGAGCAAGCA GATCACCGGC TAGGAGAAAT CTTTGTTGCG TAACTAAGTT 1080
GTTATGATTT TTTTGGTTCC CTCTAATGCT TATAGCATTG TTTAACATTG AGC 1134
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 42 5e-21 99.0
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 42 5e-21 99.0
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 42 1e-20 97.8
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 46 2e-20 97.1
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 42 1e-18 91.3
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 39 2e-18 90.5
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 38 4e-18 89.4
WERAM-Aet-0097 EMT09079 Aegilops tauschii 41 2e-17 87.4
WERAM-Sei-0085 Si022778m Setaria italica 40 3e-17 86.7
WERAM-Met-0051 KEH38943 Medicago truncatula 43 6e-17 85.5
WERAM-Zem-0158 GRMZM5G898314_P01 Zea mays 42 7e-17 85.5
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 42 7e-16 82.0
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 42 7e-16 82.0
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 38 1e-15 81.3
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 38 1e-15 81.3
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 41 1e-15 80.9
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 43 6e-15 79.0
WERAM-Prp-0078 EMJ06874 Prunus persica 39 9e-15 78.2
WERAM-Thc-0115 EOY33573 Theobroma cacao 40 1e-14 78.2
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 39 1e-14 77.4
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 40 2e-14 77.4
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 39 1e-13 74.7
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 38 2e-13 73.9
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 40 3e-13 73.2
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 40 3e-13 73.2
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 40 4e-13 72.8
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 36 4e-13 72.8
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 36 5e-13 72.8
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 37 5e-13 72.4
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 36 6e-13 72.4
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 37 2e-12 70.1
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 34 2e-10 63.9
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 35 3e-10 63.5
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 33 7e-07 52.0
Created Date 25-Jun-2016