WERAM Information

Tag Content
WERAM ID WERAM-Brr-0029
Ensembl Protein ID Bra006068.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra006068 Bra006068.1 Bra006068.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.20e-23 82.6 160 231
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                    +h+ s++F+ pvd   l ++dY+ i+k+PmdL t+k +le+g Y+sp +f+ Dvrl f+Na ayn+++++v+
  Bra006068.1-P 160 KHKWSWVFKTPVDVLgLGLQDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVY 231
                    89******************************************************************9997 PP
Protein Sequence
(Fasta)		MCLISFDAIM MEMGMISLKQ MDRVFIKPAA DLAKRRQCDA VFMRKHTNHP DDFTNPNPNS 60
SSQFRDGGDY VSFDLDSYSS NQLRELKKRL NLELEQVRFL RERIESGAFT TPAHEIGVAN 120
KTTKKKKKTS HSHGRLDLES ERALRSTMST RGKLLEKLMK HKWSWVFKTP VDVLGLGLQD 180
YHLIVKKPMD LGTVKTNLEK GFYRSPVDFA SDVRLTFTNA LAYNPKGQDV YKMAEKLLSQ 240
FDVWFSPTLK KFEAQQQGSS SRPPVVSELN QRLSENARKG PEQISIAKKL DSLKPLPTLP 300
PPVMELPRVP SPPPSPVQPP PPQPVSKVES PPPPPQPVNQ VEASVEVGEA PKGRKGKLPK 360
PKAKDPNKRE MTMEEKAKLG VNLQELPPEK LGQLIQILKK RTTNLPQDGD EIELDIEELD 420
NETLWELDRF VTNYKKMASK IKRQGFIQNL STPTRNMPPV MEMGSAEKRV RKGGDGGEED 480
VDIGEDIPIE DYPSVEIERD GTAATAGSSS SGSSSSSGGS SSSDSESGSS SGSDSDADSV 540
QSPFVEAKE 549
Nucleotide Sequence
(Fasta)		ATGTGTCTTA TCAGTTTTGA TGCAATCATG ATGGAGATGG GAATGATTAG TCTAAAACAA 60
ATGGACAGAG TGTTCATCAA ACCCGCCGCT GACCTGGCCA AAAGAAGACA ATGCGACGCC 120
GTTTTTATGA GGAAACACAC TAACCACCCC GACGATTTCA CCAACCCTAA CCCTAATTCG 180
AGCAGCCAGT TTCGCGATGG AGGAGACTAC GTTTCCTTCG ATCTCGACTC CTACTCCTCG 240
AACCAGCTCA GGGAACTGAA GAAGCGTCTC AATTTGGAGC TCGAGCAAGT CCGGTTCCTC 300
AGGGAACGAA TCGAATCGGG AGCCTTCACG ACTCCAGCTC ACGAAATTGG TGTTGCTAAC 360
AAGACGACGA AGAAGAAGAA GAAGACTAGC CATAGCCATG GAAGGTTGGA TCTGGAGTCG 420
GAGAGGGCCT TGAGGAGCAC GATGTCGACG CGCGGTAAGC TCTTGGAGAA GCTGATGAAG 480
CACAAGTGGT CGTGGGTGTT CAAAACGCCT GTTGACGTGT TGGGGTTAGG GCTTCAAGAC 540
TATCATCTGA TCGTGAAGAA GCCTATGGAT CTTGGTACTG TGAAGACGAA TCTTGAAAAG 600
GGGTTTTATA GATCTCCCGT TGATTTCGCT TCAGACGTTA GGTTGACTTT TACTAATGCC 660
TTGGCGTATA ATCCGAAGGG GCAAGACGTT TATAAAATGG CTGAGAAGCT TCTGAGTCAG 720
TTCGATGTTT GGTTTAGTCC TACGCTGAAG AAGTTCGAGG CTCAGCAGCA GGGATCGTCT 780
TCTCGTCCTC CTGTAGTGTC TGAACTCAAC CAAAGACTGT CGGAGAATGC AAGGAAAGGA 840
CCTGAACAGA TATCAATAGC GAAAAAGCTT GATTCTTTGA AGCCGTTACC TACATTGCCT 900
CCTCCAGTTA TGGAGCTGCC ACGTGTCCCA TCTCCTCCTC CTTCACCGGT TCAGCCACCA 960
CCTCCCCAGC CGGTTAGCAA AGTTGAATCA CCTCCCCCAC CTCCCCAACC GGTTAACCAA 1020
GTGGAAGCAT CTGTTGAGGT GGGAGAAGCG CCTAAGGGGA GGAAAGGGAA GTTACCGAAG 1080
CCTAAGGCTA AGGATCCAAA CAAGCGAGAG ATGACGATGG AAGAAAAGGC GAAGCTCGGT 1140
GTGAATCTCC AGGAGTTGCC TCCTGAGAAG CTTGGACAGT TGATTCAGAT TCTTAAGAAG 1200
AGAACCACGA ATCTGCCTCA GGACGGAGAC GAGATTGAGT TAGATATCGA GGAGTTGGAC 1260
AATGAGACTC TGTGGGAGCT TGATCGTTTC GTCACTAACT ACAAGAAGAT GGCGAGCAAG 1320
ATTAAGAGAC AAGGGTTTAT TCAGAATTTG TCTACTCCGA CAAGAAATAT GCCTCCGGTG 1380
ATGGAAATGG GAAGTGCTGA GAAGAGAGTG AGGAAAGGAG GGGATGGAGG AGAAGAGGAT 1440
GTAGACATTG GGGAAGATAT ACCGATTGAG GATTATCCAT CAGTGGAGAT TGAAAGGGAT 1500
GGTACAGCCG CCACTGCTGG GTCTAGCTCT TCTGGCAGCT CCAGCTCTAG TGGCGGTTCT 1560
TCTTCTAGTG ATTCAGAGTC AGGGAGCTCA TCAGGAAGTG ATTCAGATGC TGATAGTGTG 1620
CAATCGCCAT TTGTGGAAGC AAAAGAATGA 1651
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0121 AT5G10550.1 Arabidopsis thaliana 67 2e-124 443
WERAM-Arl-0050 fgenesh2_kg.112__ 2__ AT5G65630.1 Arabidopsis lyrata 51 2e-63 240
WERAM-Viv-0014 VIT_03s0097g00570.t01 Vitis vinifera 47 1e-38 158
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 49 1e-38 158
WERAM-Glm-0189 GLYMA15G06570.1 Glycine max 42 6e-37 152
WERAM-Thc-0024 EOX98601 Theobroma cacao 45 1e-36 152
WERAM-Prp-0054 EMJ01899 Prunus persica 48 2e-34 144
WERAM-Zem-0093 GRMZM2G167718_P01 Zea mays 53 3e-33 140
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 49 3e-33 140
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 51 5e-33 139
WERAM-Pot-0106 POPTR_0009s08350.1 Populus trichocarpa 40 9e-33 139
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 48 1e-32 139
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 49 1e-32 139
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 48 1e-32 138
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 53 3e-32 137
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 53 3e-32 137
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 49 3e-32 137
WERAM-Amt-0058 ERN18099 Amborella trichopoda 57 3e-32 137
WERAM-Sei-0009 Si001167m Setaria italica 50 3e-32 137
WERAM-Met-0106 AES89759 Medicago truncatula 67 4e-32 137
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 52 4e-32 136
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 41 4e-32 136
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 51 2e-31 134
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 43 2e-31 134
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 56 2e-31 134
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 55 6e-31 132
WERAM-Sot-0009 PGSC0003DMT400008039 Solanum tuberosum 41 7e-31 132
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 55 1e-30 132
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 52 3e-30 130
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 59 4e-30 130
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 59 4e-30 130
WERAM-Aet-0058 EMT09500 Aegilops tauschii 53 7e-30 129
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 53 7e-30 129
WERAM-Bro-0001 Bo00831s130.1 Brassica oleracea 62 5e-29 126
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 54 3e-28 124
Created Date 25-Jun-2016