WERAM Information

Tag Content
WERAM ID WERAM-Bro-0159
Ensembl Protein ID Bo8g104630.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g104630 Bo8g104630.1 Bo8g104630.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.10e-21 76.4 101 171
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    h++ ++F+ pvd++ l ++dY++i+kePmdL t+k++l e  Y sp++f++Dvrl fnN   yn+ +++v
  Bo8g104630.1 101 THKYGWVFNVPVDAEgLCLRDYHTIVKEPMDLGTVKAKLGESLYNSPLDFAEDVRLTFNNTILYNPIGNDV 171
                   6999*************************************************************987776 PP
Protein Sequence
(Fasta)		MVAARHDRSV NVPLVSTSHS FASEDEDPMS KVVSLSSTSK PEVKTLKLKL ISEVDKVRIV 60
ITRFDPQGGN KKIETVKKSG HGGYTVHIFK NCNNLLRKLM THKYGWVFNV PVDAEGLCLR 120
DYHTIVKEPM DLGTVKAKLG ESLYNSPLDF AEDVRLTFNN TILYNPIGND VHSMAKLLLS 180
MFEDKWVSIE VQLDSLLRNV KPTRDRKIAP IVDPLPANVG EEEEANVDNR DLTLDEKRRL 240
IEELQDLPCD KLETVVQIIK KSNPELSQQD DEIELDIDCL DIETLWELYR FVTGYKESLS 300
NKKEDQ 306
Nucleotide Sequence
(Fasta)		ATGGTGGCTG CTAGACATGA CCGGTCAGTG AATGTTCCTC TCGTGTCTAC GTCGCACTCG 60
TTTGCGTCTG AAGACGAAGA TCCCATGTCA AAGGTCGTCA GCTTAAGCTC AACTTCAAAG 120
CCTGAGGTTA AAACCTTGAA GCTAAAACTA ATCTCTGAGG TGGATAAAGT TAGGATCGTA 180
ATCACACGGT TCGATCCCCA AGGTGGAAAC AAGAAGATAG AAACAGTTAA GAAGAGCGGG 240
CATGGAGGTT ATACGGTTCA TATTTTCAAG AACTGTAACA ACTTGCTTAG GAAGTTGATG 300
ACGCATAAGT ATGGATGGGT GTTCAATGTC CCAGTGGATG CTGAAGGACT TTGCTTGCGT 360
GATTACCACA CCATTGTTAA AGAGCCTATG GATTTGGGTA CAGTGAAGGC TAAGTTGGGG 420
GAGAGTTTGT ATAACTCACC GTTGGATTTC GCTGAAGATG TTAGACTTAC TTTTAACAAT 480
ACCATCTTGT ATAATCCAAT AGGGAATGAT GTGCATAGTA TGGCTAAATT GTTACTGAGT 540
ATGTTTGAGG ACAAGTGGGT TTCCATTGAA GTGCAGCTTG ATAGTCTTCT TAGGAACGTT 600
AAACCAACTC GTGATAGGAA AATAGCTCCC ATTGTAGATC CATTACCAGC TAATGTTGGA 660
GAAGAAGAGG AGGCTAATGT TGATAATAGG GACCTTACGC TGGATGAGAA ACGGAGACTC 720
ATTGAAGAGC TTCAGGACTT GCCTTGTGAC AAATTAGAGA CAGTTGTTCA GATTATAAAG 780
AAGAGTAATC CGGAACTCTC TCAACAAGAC GATGAGATTG AGCTGGATAT TGATTGTCTT 840
GACATCGAAA CGCTTTGGGA GTTGTATAGA TTTGTGACTG GGTATAAGGA GAGCTTGAGT 900
AATAAAAAAG AGGACCAGTA G 922
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0153 Bra031004.1-P Brassica rapa 81 2e-139 492
WERAM-Arl-0031 fgenesh1_pm.C_scaffold_1001524 Arabidopsis lyrata 60 7e-98 354
WERAM-Art-0014 AT1G17790.1 Arabidopsis thaliana 60 1e-96 350
WERAM-Mua-0014 GSMUA_Achr10P27900_001 Musa acuminata 46 1e-54 210
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 47 7e-53 204
WERAM-Prp-0055 EMJ15030 Prunus persica 42 9e-50 194
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 47 1e-49 194
WERAM-Zem-0093 GRMZM2G167718_P01 Zea mays 49 2e-49 193
WERAM-Thc-0011 EOX94205 Theobroma cacao 44 2e-49 193
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 49 5e-49 191
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 47 2e-48 190
WERAM-Amt-0025 ERN13953 Amborella trichopoda 46 2e-48 189
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 44 2e-48 189
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 48 6e-48 188
WERAM-Sei-0009 Si001167m Setaria italica 49 8e-48 187
WERAM-Sot-0042 PGSC0003DMT400039787 Solanum tuberosum 42 8e-48 187
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 48 1e-47 187
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 42 1e-47 187
WERAM-Met-0054 KEH39252 Medicago truncatula 45 1e-47 187
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 49 2e-47 187
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 44 2e-47 187
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 48 2e-47 186
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 49 3e-47 186
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 47 4e-47 185
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 48 5e-47 185
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 48 6e-47 185
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 49 1e-46 184
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 45 2e-46 183
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 45 2e-46 182
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 44 2e-45 180
WERAM-Aet-0072 EMT26738 Aegilops tauschii 44 5e-45 178
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 43 8e-44 174
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 43 1e-43 174
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 37 1e-43 174
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 39 7e-35 145
Created Date 25-Jun-2016