WERAM Information

Tag Content
WERAM ID WERAM-Bro-0046
Ensembl Protein ID Bo3g021360.1
Gene Name SRT1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo3g021360 Bo3g021360.1 Bo3g021360.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 1.80e-67 228.9 36 268
Organism Brassica oleracea
Domain Profile
  HDAC SIR2
      SIR2.txt   2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkvfyalakelyplgsakPtktHyflaelekkgkllrl 98 
                   +lak+++ksk++vv+tGAGiSts+GIPDFR+++G+++  +++     +++                 k+ +p+++a P++tH++l ele++g l+++
  Bo3g021360.1  36 ELAKMIQKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREG-----KDLP----------------KASLPFHRAMPSMTHMALVELERAGILKFV 111
                   799**********************************96666.....3333................3346777899******************** PP
      SIR2.txt  99 ytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkakekvpkCek..Ckgvlkpdivffgenlpeefleeveedlkeadlllvl 193
                   ++QN+DgL++++g++++kl+elHG+ ++++C +C++e+ r++ +e++  ke+ +kC++  C+++lk++++ ++++lp ++++ +e+++k adl+l+l
  Bo3g021360.1 112 ISQNVDGLHLRSGIPREKLSELHGDSFMEMCPSCGAEYLRDFEVETIGLKETSRKCSNakCGAKLKDTVLDWEDALPPKEIDPAEKHCKIADLVLCL 208
                   ********************************************************9888************************************* PP
      SIR2.txt 194 GtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevveellkllglee 253
                   GtSl+++p+++l++k+ + + ++++vnl+++++dk+ad++++g +d+vv+ ++++l++++
  Bo3g021360.1 209 GTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKADVVIHGFVDKVVAGVMETLNMQI 268
                   ******************************************************999875 PP
Protein Sequence
(Fasta)		MSLGYAEKLS FIEDVGQVGM AEFFDPSHVL QCKIEELAKM IQKSKHLVVF TGAGISTSCG 60
IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV ELERAGILKF VISQNVDGLH 120
LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSNA KCGAKLKDTV 180
LDWEDALPPK EIDPAEKHCK IADLVLCLGT SLQITPACNL PLKCLRGGGK IVIVNLQKTP 240
KDKKADVVIH GFVDKVVAGV METLNMQIPP YVRIDLFQII LNQSLSRDER YINWTLRVAS 300
VHGLTSQLPF IGSVEVSFSD NHNFKDAVLD EQPFIIKRRT TETETFDIFL KINYSEGCDC 360
LSTKITIPFK YEVSTEEHEE ETIDKEAVLQ SLREKAVEES SCGQSGVVER RFVSEPRSET 420
IVYATVTNLR TFHCQQSVLA NGDLRWKMEG SGTTSRKRSR TGKRKPRA 468
Nucleotide Sequence
(Fasta)		ATGTCTTTAG GTTACGCAGA GAAACTATCT TTCATCGAAG ATGTTGGTCA AGTGGGCATG 60
GCTGAGTTCT TCGACCCATC TCATGTTCTG CAATGCAAGA TCGAAGAACT TGCTAAGATG 120
ATTCAAAAGA GTAAGCATCT AGTGGTGTTT ACAGGTGCAG GCATCTCAAC TTCTTGTGGT 180
ATACCTGATT TCAGGGGCCC CAAAGGCATT TGGACATTGC AGCGCGAGGG CAAAGATCTA 240
CCAAAAGCAT CTCTGCCGTT TCATCGTGCA ATGCCGAGCA TGACCCATAT GGCTTTGGTT 300
GAATTGGAAA GAGCTGGCAT TTTAAAATTT GTCATCAGTC AGAATGTGGA TGGCTTGCAT 360
CTTCGATCTG GGATACCAAG AGAGAAGCTC TCTGAACTGC ATGGAGACTC TTTTATGGAG 420
ATGTGCCCAT CATGTGGAGC TGAGTACCTG CGTGATTTCG AGGTGGAAAC TATTGGATTA 480
AAAGAGACCT CGAGAAAATG CTCTAATGCA AAGTGTGGTG CTAAACTCAA AGATACGGTC 540
TTAGATTGGG AGGATGCTTT GCCTCCAAAA GAGATTGATC CTGCAGAGAA ACATTGCAAA 600
ATTGCTGATC TTGTACTCTG TTTGGGTACC AGTTTGCAGA TAACCCCAGC TTGCAACTTG 660
CCTCTCAAGT GTCTCAGGGG TGGAGGCAAG ATTGTGATTG TTAATCTTCA GAAAACCCCA 720
AAGGACAAGA AAGCAGACGT AGTGATTCAC GGTTTTGTTG ATAAGGTGGT TGCAGGGGTC 780
ATGGAAACTC TCAACATGCA GATTCCTCCA TATGTCAGAA TAGATCTTTT CCAGATAATA 840
CTAAACCAAT CCTTAAGCAG AGATGAAAGG TACATTAACT GGACACTTCG TGTTGCAAGT 900
GTTCATGGAT TAACTTCTCA GCTACCATTC ATTGGATCAG TTGAGGTCTC CTTCTCGGAC 960
AACCATAACT TCAAAGATGC AGTTCTCGAT GAGCAGCCGT TTATCATAAA AAGGAGAACA 1020
ACGGAAACCG AGACATTTGA CATATTCTTG AAAATCAACT ACAGTGAGGG TTGTGACTGT 1080
CTCTCCACCA AAATTACCAT TCCCTTCAAA TATGAGGTTT CAACGGAAGA GCATGAGGAG 1140
GAGACTATTG ACAAGGAGGC TGTGCTGCAA AGCCTGAGAG AGAAAGCGGT TGAAGAATCT 1200
AGCTGCGGGC AAAGCGGTGT GGTCGAGAGA AGATTTGTTT CTGAGCCGAG AAGTGAAACC 1260
ATTGTGTATG CGACTGTGAC CAATCTCAGG ACGTTCCATT GTCAACAATC TGTGCTTGCT 1320
AATGGTGACC TCAGGTGGAA GATGGAAGGA TCTGGAACAA CGTCTCGTAA ACGTTCTAGA 1380
ACCGGGAAAC GAAAACCGAG GGCATAG 1408
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0144 Bra028961.1-P Brassica rapa 99 0.0 890
WERAM-Art-0143 AT5G55760.1 Arabidopsis thaliana 88 0.0 824
WERAM-Arl-0111 fgenesh2_kg.8__ 1477__ AT5G55760.1 Arabidopsis lyrata 89 0.0 824
WERAM-Pot-0016 POPTR_0001s37680.1 Populus trichocarpa 71 0.0 670
WERAM-Glm-0232 GLYMA18G08450.1 Glycine max 71 0.0 665
WERAM-Met-0085 KEH34091 Medicago truncatula 72 0.0 660
WERAM-Prp-0059 EMJ12601 Prunus persica 72 0.0 650
WERAM-Sol-0101 Solyc07g065550.2.1 Solanum lycopersicum 69 0.0 647
WERAM-Viv-0122 VIT_19s0015g00570.t01 Vitis vinifera 71 0.0 640
WERAM-Sot-0070 PGSC0003DMT400057382 Solanum tuberosum 67 4e-170 595
WERAM-Amt-0008 ERN05726 Amborella trichopoda 66 4e-166 581
WERAM-Mua-0125 GSMUA_Achr8P24470_001 Musa acuminata 63 3e-162 568
WERAM-Sob-0090 Sb06g020390.1 Sorghum bicolor 60 1e-156 550
WERAM-Orbr-0051 OB04G14570.1 Oryza brachyantha 61 2e-154 543
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 60 2e-152 536
WERAM-Tra-0045 Traes_2AS_69329D634.2 Triticum aestivum 60 4e-152 535
WERAM-Ors-0038 OS04T0271000-01 Oryza sativa 60 2e-151 533
WERAM-Ori-0050 BGIOSGA015454-PA Oryza indica 60 2e-150 529
WERAM-Brd-0122 BRADI5G02940.2 Brachypodium distachyon 59 4e-149 525
WERAM-Aet-0057 EMT21754 Aegilops tauschii 53 3e-134 476
WERAM-Php-0065 PP1S272_33V6.1 Physcomitrella patens 53 6e-132 468
WERAM-Sei-0037 Si010693m Setaria italica 73 3e-129 459
WERAM-Zem-0044 GRMZM2G058573_P01 Zea mays 75 9e-118 421
WERAM-Lep-0045 LPERR04G03890.1 Leersia perrieri 75 1e-116 417
WERAM-Orl-0053 KN539062.1_FGP005 Oryza longistaminata 53 2e-115 413
WERAM-Xet-0167 ENSXETP00000057383.2 Xenopus tropicalis 52 2e-82 304
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 54 4e-82 302
WERAM-Ran-0038 ENSRNOP00000008758.3 Rattus norvegicus 53 5e-81 299
WERAM-Sah-0106 ENSSHAP00000011597.1 Sarcophilus harrisii 54 7e-81 298
WERAM-Mam-0185 ENSMMUP00000026241.2 Macaca mulatta 52 9e-80 295
WERAM-Ict-0164 ENSSTOP00000015068.1 Ictidomys tridecemlineatus 51 1e-79 294
WERAM-Otg-0026 ENSOGAP00000001481.2 Otolemur garnettii 52 2e-79 293
WERAM-Meg-0032 ENSMGAP00000002578.1 Meleagris gallopavo 44 4e-79 293
WERAM-Soa-0094 ENSSARP00000008710.1 Sorex araneus 51 4e-79 292
WERAM-Paa-0028 ENSPANP00000011086.1 Papio anubis 51 5e-79 292
WERAM-Mum-0135 ENSMUSP00000048971.8 Mus musculus 52 6e-79 292
WERAM-Pat-0085 ENSPTRP00000017501.2 Pan troglodytes 51 6e-79 292
WERAM-Gog-0100 ENSGGOP00000008641.2 Gorilla gorilla 51 6e-79 292
WERAM-Lac-0065 ENSLACP00000008822.2 Latimeria chalumnae 52 9e-79 291
WERAM-Hos-0033 ENSP00000337332.1 Homo sapiens 51 1e-78 291
WERAM-Mup-0054 ENSMPUP00000004703.1 Mustela putorius furo 51 1e-78 291
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 52 1e-78 291
WERAM-Chs-0131 ENSCSAP00000006979.1 Chlorocebus sabaeus 51 1e-78 291
WERAM-Caj-0156 ENSCJAP00000027893.2 Callithrix jacchus 51 1e-78 291
WERAM-Gaga-0011 ENSGALP00000001888.3 Gallus gallus 47 2e-78 290
WERAM-Poa-0078 ENSPPYP00000010537.2 Pongo abelii 51 2e-78 290
WERAM-Pof-0157 ENSPFOP00000012793.2 Poecilia formosa 52 2e-78 290
WERAM-Caf-0197 ENSCAFP00000028217.2 Canis familiaris 51 3e-78 290
WERAM-Xim-0231 ENSXMAP00000019352.1 Xiphophorus maculatus 52 3e-78 289
WERAM-Aim-0033 ENSAMEP00000002298.1 Ailuropoda melanoleuca 51 1e-77 288
WERAM-Loa-0191 ENSLAFP00000023357.1 Loxodonta africana 51 2e-77 287
WERAM-Tar-0090 ENSTRUP00000017073.1 Takifugu rubripes 52 4e-77 286
WERAM-Bot-0171 ENSBTAP00000026521.5 Bos taurus 51 5e-77 285
WERAM-Gaa-0163 ENSGACP00000020196.1 Gasterosteus aculeatus 52 9e-77 285
WERAM-Orn-0127 ENSONIP00000012860.1 Oreochromis niloticus 51 2e-76 283
WERAM-Cis-0072 ENSCSAVP00000015450.1 Ciona savignyi 48 1e-75 281
WERAM-Ova-0116 ENSOARP00000011370.1 Ovis aries 50 1e-74 278
WERAM-Fia-0011 ENSFALP00000000954.1 Ficedula albicollis 53 1e-74 277
WERAM-Pes-0079 ENSPSIP00000009554.1 Pelodiscus sinensis 53 2e-73 274
WERAM-Sus-0098 ENSSSCP00000014344.2 Sus scrofa 49 2e-73 273
WERAM-Myl-0098 ENSMLUP00000007946.2 Myotis lucifugus 53 4e-73 272
WERAM-Gam-0126 ENSGMOP00000013105.1 Gadus morhua 50 2e-71 267
WERAM-Drm-0064 FBpp0293897 Drosophila melanogaster 43 2e-68 256
WERAM-Eqc-0160 ENSECAP00000016959.1 Equus caballus 42 2e-48 191
WERAM-Anp-0140 ENSAPLP00000015159.1 Anas platyrhynchos 42 2e-47 187
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 33 1e-24 112
WERAM-Ast-0001 CADATEAP00000292 Aspergillus terreus 30 4e-23 106
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 29 6e-23 106
WERAM-Scs-0014 EDN99996 Sclerotinia sclerotiorum 33 2e-22 104
WERAM-Sem-0060 EFJ23112 Selaginella moellendorffii 30 2e-21 101
WERAM-Asn-0013 CADANIAP00002934 Aspergillus nidulans 31 3e-21 100
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 31 3e-21 100
WERAM-Thc-0008 EOX92647 Theobroma cacao 26 5e-21 99.8
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 31 5e-21 99.8
WERAM-Trr-0018 EGR46788 Trichoderma reesei 28 7e-21 99.4
WERAM-Asc-0026 CADACLAP00005809 Aspergillus clavatus 34 8e-21 99.0
WERAM-Fuo-0021 FOXG_06023P0 Fusarium oxysporum 29 4e-20 96.7
WERAM-Pyt-0039 EFQ86136 Pyrenophora teres 31 1e-19 95.5
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 29 1e-19 95.5
WERAM-Lem-0007 CBY02082 Leptosphaeria maculans 30 4e-19 93.6
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 33 5e-19 93.2
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 30 5e-19 93.2
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 29 8e-19 92.4
WERAM-Aso-0017 CADAORAP00002263 Aspergillus oryzae 29 8e-19 92.4
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 29 1e-18 92.0
WERAM-Dan-0168 ENSDNOP00000020521.1 Dasypus novemcinctus 28 1e-18 92.0
WERAM-Trv-0012 EHK19002 Trichoderma virens 28 1e-18 91.7
WERAM-Orla-0002 ENSORLP00000000105.1 Oryzias latipes 32 3e-18 90.9
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 29 6e-18 89.7
WERAM-Asni-0009 CADANGAP00002892 Aspergillus niger 32 7e-18 89.4
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 29 8e-18 89.4
WERAM-Leo-0013 ENSLOCP00000002849.1 Lepisosteus oculatus 29 1e-17 89.0
WERAM-Asf-0024 CADAFLAP00010064 Aspergillus flavus 31 1e-17 89.0
WERAM-Scp-0042 SPCC132.02.1:pep Schizosaccharomyces pombe 30 1e-17 88.6
WERAM-Cae-0022 R11A8.4a Caenorhabditis elegans 26 2e-17 88.2
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 26 4e-17 87.0
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 28 4e-17 87.0
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 24 4e-17 87.0
WERAM-Pytr-0009 EDU41553 Pyrenophora triticirepentis 31 4e-17 86.7
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 27 4e-17 86.7
WERAM-Asm-0153 ENSAMXP00000015326.1 Astyanax mexicanus 31 4e-17 86.7
WERAM-Zyt-0001 Mycgr3P100618 Zymoseptoria tritici 30 5e-17 86.7
WERAM-Mao-0029 MGG_10267T0 Magnaporthe oryzae 29 5e-17 86.7
WERAM-Yal-0031 CAG78100 Yarrowia lipolytica 30 6e-17 86.3
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 24 6e-17 86.3
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 24 7e-17 86.3
WERAM-Osl-0012 ABO98065 Ostreococcus lucimarinus 30 8e-17 85.9
WERAM-Scj-0005 EEB06048 Schizosaccharomyces japonicus 32 9e-17 85.5
WERAM-Tag-0095 ENSTGUP00000006303.1 Taeniopygia guttata 27 2e-16 84.7
WERAM-Nol-0008 ENSNLEP00000001018.1 Nomascus leucogenys 28 2e-16 84.7
WERAM-Kop-0003 CAY67751 Komagataella pastoris 28 2e-16 84.3
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 28 2e-16 84.3
WERAM-Asg-0028 AAS54472 Ashbya gossypii 30 3e-16 84.0
WERAM-Nec-0006 EFNCRP00000000764 Neurospora crassa 31 5e-16 83.2
WERAM-Orc-0069 ENSOCUP00000006265.2 Oryctolagus cuniculus 27 7e-16 82.8
WERAM-Cii-0054 ENSCINP00000012226.3 Ciona intestinalis 30 2e-15 81.3
WERAM-Tub-0067 ENSTBEP00000008310.1 Tupaia belangeri 30 3e-15 80.5
WERAM-Caa-0033 KGT64755 Candida albicans 28 6e-15 79.7
Created Date 25-Jun-2016