WERAM Information

Tag Content
WERAM ID WERAM-Pot-0118
Ensembl Protein ID POPTR_0010s19540.1
Gene Name POPTR_0010s19550g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0010s19540 POPTR_0010s19540.1 POPTR_0010s19540.1
POPTR_0010s19540 POPTR_0010s19540.2 POPTR_0010s19540.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.40e-13 49.8 60 110
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C  Cg +++ +++++ Cd C++w+H+kCvk++  ++++ k++ CpsC +
  POPTR_0010s19540.1  60 TLCGSCGGNYNADEFWIGCDICERWYHGKCVKITPAKAESIKQYKCPSCST 110
                         78****888888889*******************555554489******86 PP
Protein Sequence
(Fasta)		MVNDLPTLFE IVTGRKPVED KPSADGGSKS RNNTKRSTDG QARSNSKLSY VEDEDEHGDT 60
LCGSCGGNYN ADEFWIGCDI CERWYHGKCV KITPAKAESI KQYKCPSCST KKSRH 115
Nucleotide Sequence
(Fasta)		GAAGCGACTG TTTAGCATGG TAAATGATCT GCCCACCCTC TTTGAAATTG TGACCGGGAG 60
GAAACCAGTA GAAGATAAGC CTAGTGCTGA CGGTGGTAGC AAATCCAGGA ATAACACAAA 120
GAGATCAACT GATGGACAGG CAAGAAGCAA TTCCAAGTTA AGTTACGTGG AGGATGAAGA 180
TGAGCATGGG GACACCCTTT GCGGGAGCTG TGGAGGGAAC TACAATGCTG ATGAGTTTTG 240
GATTGGTTGT GACATTTGTG AACGATGGTA CCATGGAAAG TGTGTGAAGA TAACACCAGC 300
AAAAGCTGAA AGCATCAAGC AGTACAAATG CCCTTCTTGC AGCACAAAGA AATCTAGGCA 360
CTAACAAACA GTCGAACTTG TGGCTCTTTC GGAAGAAATA TTCCTAGGAC AGCCACAGGT 420
GGGTGCAGTT GTAGATCCTA GATATATATG TGAATGTGTG ATTTGCATTT ACAACTAGGA 480
TTTTGGACTG CATGTAGACG TGG 504
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0085 EMJ19499 Prunus persica 80 5e-53 202
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 76 5e-50 192
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 74 4e-49 189
WERAM-Thc-0059 EOY07191 Theobroma cacao 73 2e-47 183
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 75 5e-47 182
WERAM-Met-0092 KEH28874 Medicago truncatula 75 2e-46 180
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 74 3e-45 176
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 75 8e-45 175
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 75 9e-45 174
WERAM-Mua-0047 GSMUA_Achr2P18960_001 Musa acuminata 66 2e-44 173
WERAM-Amt-0010 ERN05231 Amborella trichopoda 68 3e-43 169
WERAM-Brr-0008 Bra001393.1-P Brassica rapa 67 2e-41 163
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 69 1e-40 161
WERAM-Sei-0015 Si003369m Setaria italica 59 2e-39 157
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 62 2e-38 154
WERAM-Zem-0036 GRMZM2G047316_P01 Zea mays 59 4e-37 149
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 57 8e-36 145
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 56 4e-35 143
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 61 7e-35 142
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 61 7e-35 142
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 61 7e-35 142
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 61 8e-35 142
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 54 1e-34 141
WERAM-Orb-0073 OBART07G08020.1 Oryza barthii 60 1e-34 141
WERAM-Orm-0044 OMERI03G35810.1 Oryza meridionalis 54 1e-34 141
WERAM-Org-0041 ORGLA03G0356800.1 Oryza glaberrima 54 2e-34 140
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 54 2e-34 140
WERAM-Orgl-0042 OGLUM03G38760.1 Oryza glumaepatula 55 2e-34 140
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 57 2e-33 137
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 56 3e-33 136
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 56 9e-33 135
WERAM-Tra-0009 Traes_1AS_59404C639.1 Triticum aestivum 52 5e-31 129
WERAM-Aet-0099 EMT23706 Aegilops tauschii 52 5e-31 129
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 52 6e-31 129
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 51 5e-28 119
Created Date 25-Jun-2016