WERAM Information

Tag Content
WERAM ID WERAM-Brr-0008
Ensembl Protein ID Bra001393.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra001393 Bra001393.1 Bra001393.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.40e-11 43.3 195 245
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +Cg ++++++++++Cd C++w+H+kCvk++  ++ + k++ Cp C +
  Bra001393.1-P 195 TLCGICGGNYTQDEFWICCDVCERWYHGKCVKITPAKADSIKQYKCPPCCA 245
                    78****99999999********************555554489******75 PP
Protein Sequence
(Fasta)		MAAVSSNPRT VEEIFKDYSA RRSALLRALT KDVDDFYSQC DPEKENLCLY GHPNESWEVN 60
LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSYIY CGLTHVYGRL DCCYFSSFLH 120
LWKRLFSLIN DLPTLFDVVT GRKPIKDNKP SSDSGSKSRN GTKRSIEGQT KSPTPRLMEE 180
SYEDEDEEED EHGDTLCGIC GGNYTQDEFW ICCDVCERWY HGKCVKITPA KADSIKQYKC 240
PPCCAKKGRQ
Nucleotide Sequence
(Fasta)		ATGGCCGCCG TCTCCTCTAA CCCCCGCACC GTCGAAGAGA TCTTCAAAGA TTACAGCGCT 60
CGTCGCTCCG CTCTCCTCCG GGCTCTAACT AAAGATGTTG ATGATTTCTA CTCTCAATGC 120
GATCCGGAGA AGGAGAATTT GTGTTTGTAT GGACATCCGA ATGAGTCGTG GGAAGTGAAT 180
CTACCGGCGG AGGAGGTTCC TCCGGAGCTT CCTGAGCCTG CGCTTGGTAT CAATTTCGCT 240
AGAGATGGTA TGCAGAGGAA GGATTGGCTC TCGCTTGTTG CTGTCCATAG CTATATTTAT 300
TGTGGCTTGA CTCATGTCTA TGGACGTCTT GATTGTTGTT ACTTCAGCTC TTTCTTGCAT 360
CTTTGGAAGC GGTTGTTCAG TCTGATCAAC GATCTCCCAA CTCTCTTCGA TGTAGTGACT 420
GGAAGAAAAC CCATCAAAGA CAACAAGCCA AGCTCAGATT CTGGAAGCAA ATCCAGAAAC 480
GGCACTAAGA GATCAATAGA AGGGCAGACA AAGAGTCCAA CACCAAGACT GATGGAAGAG 540
AGCTACGAGG ATGAGGATGA AGAAGAAGAC GAGCATGGAG ACACTCTCTG TGGTATCTGT 600
GGAGGCAACT ATACACAAGA TGAGTTCTGG ATTTGCTGTG ATGTTTGTGA ACGTTGGTAT 660
CATGGAAAAT GCGTGAAGAT CACTCCTGCC AAAGCAGATA GCATCAAGCA GTATAAATGC 720
CCTCCTTGCT GTGCAAAGAA AGGAAGACAG TGA 754
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 86 7e-100 360
WERAM-Arl-0058 fgenesh2_kg.3__ 1160__ AT3G11200.1 Arabidopsis lyrata 87 5e-95 344
WERAM-Art-0068 AT3G11200.1 Arabidopsis thaliana 85 6e-93 337
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 71 7e-80 293
WERAM-Prp-0085 EMJ19499 Prunus persica 70 1e-79 293
WERAM-Thc-0059 EOY07191 Theobroma cacao 70 4e-79 291
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 68 2e-78 288
WERAM-Amt-0010 ERN05231 Amborella trichopoda 68 6e-78 287
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 68 4e-77 284
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 68 6e-77 284
WERAM-Met-0150 KEH23172 Medicago truncatula 68 2e-75 279
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 69 2e-75 278
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 65 8e-75 277
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 61 2e-68 255
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 61 1e-67 253
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 61 1e-67 253
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 61 1e-67 253
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 61 2e-67 253
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 60 4e-67 251
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 60 4e-67 251
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 60 4e-67 251
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 60 4e-67 251
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 59 8e-67 250
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 60 1e-66 249
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 60 1e-65 246
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 58 4e-65 245
WERAM-Sei-0134 Si037171m Setaria italica 59 4e-65 245
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 60 1e-64 243
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 58 3e-64 241
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 58 7e-64 241
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 57 9e-63 237
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 56 1e-62 236
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 58 2e-62 236
WERAM-Aet-0106 EMT19247 Aegilops tauschii 54 9e-59 223
Created Date 25-Jun-2016