Tag |
Content |
WERAM ID |
WERAM-Orgl-0105 |
Ensembl Protein ID |
OGLUM10G09860.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HAT |
GCN5 |
4.40e-61 |
206.8 |
150 |
297 |
Ac_Reader |
Bromodomain |
6.30e-25 |
88.2 |
365 |
435 |
|
Organism |
Oryza glumaepatula |
Domain Profile |
HAT GCN5
GCN5.txt 3 eksrvdevllvlvglqkvfeaqlprmkkeyiarlladrkhkslvvikkdngvvggitfrlfeeegfvEvvycavaskervkGyGkrLlnhlkev 96 +++ vde++++lvgl+++f++qlp+m+keyi rl++dr hks++vi+ +n+vvggit+r++ +++f E+ +ca++++e+vkGyG+rL+nhlk++ OGLUM10G09860.1 150 SNDGVDEHMIWLVGLKNIFARQLPNMPKEYIVRLVMDRTHKSMMVIR-NNIVVGGITYRPYTSQKFGEIAFCAITADEQVKGYGTRLMNHLKQH 242 67889******************************************.9********************************************* PP GCN5.txt 97 arktrrikffLTfadneaigyfkkqgfskeiklpksstigyikeyegatllecel 151 ar+++ +++fLT+adn+a+gyf kqgf+kei+l+k++++gyik+y+g+ l+ec + OGLUM10G09860.1 243 ARDADGLTHFLTYADNNAVGYFVKQGFTKEITLDKERWQGYIKDYDGGILMECRI 297 *****************************************************86 PP
Ac_Reader Bromodomain
BROMO.txt 2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegn.YsspeefvkDvrlifnNakaynenkssvq 72 eh++++pF+epvd ++pdYydiik P+dL+t+ +r+e+++ Y ++e fv+D++++f+Nak+yn++++ ++ OGLUM10G09860.1 365 EHPDAWPFKEPVDS-RDVPDYYDIIKDPIDLKTMSKRVESEQyYVTLEMFVADMKRMFSNAKTYNSPDTIYY 435 89************.6***********************9887999*********************99876 PP
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Protein Sequence (Fasta) | METSHRKRKL PPSSLSDATA DEDDDTTAPS SPSTSPSSPS RPSSPSSSHS DDDDDDSLHT 60 FTAARLDGAP PSSSGRPPKP ESSTVSAAAA AAAAAAAPKP DSASAAAGDG KEDPKGLFTD 120 NIQTSGAYSA REEGLKREEE AGRLKFLCYS NDGVDEHMIW LVGLKNIFAR QLPNMPKEYI 180 VRLVMDRTHK SMMVIRNNIV VGGITYRPYT SQKFGEIAFC AITADEQVKG YGTRLMNHLK 240 QHARDADGLT HFLTYADNNA VGYFVKQGFT KEITLDKERW QGYIKDYDGG ILMECRIDQK 300 LPYVDLATMI RRQRQAIDEK IRELSNCHIV YSGIDFQKGK LGGRQISGGI PNHDQPFLLI 360 TNMNEHPDAW PFKEPVDSRD VPDYYDIIKD PIDLKTMSKR VESEQYYVTL EMFVADMKRM 420 FSNAKTYNSP DTIYYKCASR LESFFSNKVA SQLAQASTKN Protein Fasta Sequence
>OGLUM10G09860.1|Bromodomain|Oryza glumaepatula METSHRKRKLPPSSLSDATADEDDDTTAPSSPSTSPSSPSRPSSPSSSHSDDDDDDSLHTFTAARLDGAPPSSSGRPPKPESSTVSAAAAAAAAAAAPKPDSASAAAGDGKEDPKGLFTDNIQTSGAYSAREEGLKREEEAGRLKFLCYSNDGVDEHMIWLVGLKNIFARQLPNMPKEYIVRLVMDRTHKSMMVIRNNIVVGGITYRPYTSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGFTKEITLDKERWQGYIKDYDGGILMECRIDQKLPYVDLATMIRRQRQAIDEKIRELSNCHIVYSGIDFQKGKLGGRQISGGIPNHDQPFLLITNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKCASRLESFFSNKVASQLAQASTKN
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Nucleotide Sequence (Fasta) | ATGGAAACCT CCCACCGCAA GCGGAAGCTC CCGCCGTCGT CCCTCTCCGA CGCCACCGCC 60 GACGAGGACG ACGACACCAC CGCGCCGTCG TCGCCGTCCA CCTCCCCGTC GTCGCCCTCC 120 CGCCCGTCCT CCCCGTCCTC CTCCCACTCC GACGACGACG ACGACGACTC CCTCCACACC 180 TTCACCGCCG CCCGCCTCGA CGGCGCGCCC CCGTCCTCAT CTGGCCGCCC GCCGAAGCCC 240 GAGTCCTCGA CCGTGTCTGC CGCCGCCGCG GCCGCGGCTG CAGCGGCCGC TCCCAAGCCC 300 GATTCCGCTT CCGCTGCCGC CGGCGACGGC AAGGAGGACC CGAAGGGGTT GTTCACTGAC 360 AACATTCAGA CCAGTGGAGC GTATAGCGCT CGAGAGGAGG GCCTCAAGCG TGAGGAAGAA 420 GCAGGGAGGC TGAAATTTCT ATGCTATTCT AATGATGGAG TTGATGAACA TATGATTTGG 480 TTGGTAGGCT TGAAGAATAT CTTTGCTCGG CAGCTTCCTA ACATGCCCAA AGAGTACATT 540 GTCCGTCTTG TTATGGATAG AACTCACAAA TCAATGATGG TTATCAGGAA TAATATTGTT 600 GTAGGAGGCA TTACTTACCG GCCTTATACA AGCCAGAAGT TCGGAGAAAT AGCATTTTGT 660 GCAATTACAG CTGATGAGCA AGTTAAAGGC TATGGGACAC GGTTAATGAA TCACCTGAAG 720 CAACATGCCC GAGATGCTGA TGGGCTCACT CATTTCTTAA CTTATGCAGA TAACAATGCC 780 GTTGGCTATT TTGTAAAGCA GGGTTTCACA AAGGAGATCA CATTGGACAA AGAAAGATGG 840 CAAGGGTACA TTAAAGACTA TGATGGAGGA ATATTGATGG AGTGCAGAAT TGATCAAAAG 900 TTGCCATATG TTGATCTGGC AACGATGATT CGGCGTCAAA GACAGGCAAT TGACGAGAAA 960 ATCAGAGAGC TTTCAAACTG CCATATTGTT TATTCTGGAA TTGACTTCCA AAAGGGGAAG 1020 CTGGGTGGAC GCCAGATCAG TGGGGGCATT CCAAATCACG ATCAGCCTTT TCTCCTGATT 1080 ACAAATATGA ATGAGCATCC TGATGCTTGG CCATTCAAAG AGCCAGTGGA TTCACGTGAT 1140 GTTCCCGACT ATTATGACAT TATCAAAGAT CCTATTGATT TGAAGACAAT GTCAAAAAGA 1200 GTTGAGTCTG AGCAGTATTA TGTGACGCTA GAGATGTTTG TAGCTGACAT GAAGAGAATG 1260 TTCAGCAATG CAAAAACTTA TAACTCTCCC GATACAATCT ATTACAAGTG TGCCTCACGG 1320 CTCGAGAGCT TCTTCTCAAA CAAAGTAGCA TCTCAGCTTG CCCAAGCCTC AACGAAGAAC 1380 TGA
1384Nucleotide Fasta Sequence
>OGLUM10G09860.1|Bromodomain|Oryza glumaepatula ATGGAAACCTCCCACCGCAAGCGGAAGCTCCCGCCGTCGTCCCTCTCCGACGCCACCGCCGACGAGGACGACGACACCACCGCGCCGTCGTCGCCGTCCACCTCCCCGTCGTCGCCCTCCCGCCCGTCCTCCCCGTCCTCCTCCCACTCCGACGACGACGACGACGACTCCCTCCACACCTTCACCGCCGCCCGCCTCGACGGCGCGCCCCCGTCCTCATCTGGCCGCCCGCCGAAGCCCGAGTCCTCGACCGTGTCTGCCGCCGCCGCGGCCGCGGCTGCAGCGGCCGCTCCCAAGCCCGATTCCGCTTCCGCTGCCGCCGGCGACGGCAAGGAGGACCCGAAGGGGTTGTTCACTGACAACATTCAGACCAGTGGAGCGTATAGCGCTCGAGAGGAGGGCCTCAAGCGTGAGGAAGAAGCAGGGAGGCTGAAATTTCTATGCTATTCTAATGATGGAGTTGATGAACATATGATTTGGTTGGTAGGCTTGAAGAATATCTTTGCTCGGCAGCTTCCTAACATGCCCAAAGAGTACATTGTCCGTCTTGTTATGGATAGAACTCACAAATCAATGATGGTTATCAGGAATAATATTGTTGTAGGAGGCATTACTTACCGGCCTTATACAAGCCAGAAGTTCGGAGAAATAGCATTTTGTGCAATTACAGCTGATGAGCAAGTTAAAGGCTATGGGACACGGTTAATGAATCACCTGAAGCAACATGCCCGAGATGCTGATGGGCTCACTCATTTCTTAACTTATGCAGATAACAATGCCGTTGGCTATTTTGTAAAGCAGGGTTTCACAAAGGAGATCACATTGGACAAAGAAAGATGGCAAGGGTACATTAAAGACTATGATGGAGGAATATTGATGGAGTGCAGAATTGATCAAAAGTTGCCATATGTTGATCTGGCAACGATGATTCGGCGTCAAAGACAGGCAATTGACGAGAAAATCAGAGAGCTTTCAAACTGCCATATTGTTTATTCTGGAATTGACTTCCAAAAGGGGAAGCTGGGTGGACGCCAGATCAGTGGGGGCATTCCAAATCACGATCAGCCTTTTCTCCTGATTACAAATATGAATGAGCATCCTGATGCTTGGCCATTCAAAGAGCCAGTGGATTCACGTGATGTTCCCGACTATTATGACATTATCAAAGATCCTATTGATTTGAAGACAATGTCAAAAAGAGTTGAGTCTGAGCAGTATTATGTGACGCTAGAGATGTTTGTAGCTGACATGAAGAGAATGTTCAGCAATGCAAAAACTTATAACTCTCCCGATACAATCTATTACAAGTGTGCCTCACGGCTCGAGAGCTTCTTCTCAAACAAAGTAGCATCTCAGCTTGCCCAAGCCTCAACGAAGAACTGA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |